Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G188800 Prunus persica HOM05D000461 ORTHO05D009768 1.9e-267 925.2 454 100.0
MD03G1220100 Malus domestica HOM05D000461 ORTHO05D009768 3.6e-250 867.8 453 92.1
RcHm_v2.0_Chr5g0035161 Rosa chinensis HOM05D000461 ORTHO05D009768 3.6e-250 867.8 455 93.2
FvH4_3g20850 Fragaria vesca HOM05D000461 ORTHO05D009768 3.8e-244 847.8 456 91.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 1.3e-228 796.2 450 86.2
TAR626G0736 Trochodendron aralioides HOM05D000461 ORTHO05D009768 6.5e-228 793.9 452 85.6
QL93p2023_0115 Quercus lobata HOM05D000461 ORTHO05D009768 3.2e-227 791.6 467 84.2
Lj3g0022224 Lotus japonicus HOM05D000461 ORTHO05D009768 2.1e-226 788.9 449 85.7
Dinv08334 Davidia involucrata HOM05D000461 ORTHO05D009768 6.1e-226 787.3 448 85.3
Lalb_Chr19g0134451 Lupinus albus HOM05D000461 ORTHO05D009768 8.0e-226 786.9 453 84.3
Hma1.2p1_1003F.1_g246700 Hydrangea macrophylla HOM05D000461 ORTHO05D009768 7.5e-224 780.4 456 84.2
Potri.011G127400 Populus trichocarpa HOM05D000461 ORTHO05D009768 3.7e-223 778.1 454 83.5
TPR.G37406 Trifolium pratense HOM05D000461 ORTHO05D009768 1.8e-222 775.8 453 84.3
Medtr8g093250 Medicago truncatula HOM05D000461 ORTHO05D009768 4.1e-222 774.6 453 84.8
Gorai.002G075600 Gossypium raimondii HOM05D000461 ORTHO05D009768 9.2e-222 773.5 453 84.5
Nn1g03933 Nelumbo nucifera HOM05D000461 ORTHO05D009768 1.6e-221 772.7 471 80.9
Gohir.D01G055500 Gossypium hirsutum HOM05D000461 ORTHO05D009768 1.3e-220 769.6 453 83.9
arahy.Tifrunner.gnm1.ann1.58XN2N Arachis hypogaea HOM05D000461 ORTHO05D009768 1.7e-220 769.2 474 81.0
QL08p018730 Quercus lobata HOM05D000461 ORTHO05D009768 2.9e-220 768.5 516 76.2
CANSAT11G0348 Cannabis sativa HOM05D000461 ORTHO05D009768 3.8e-220 768.1 481 80.9
arahy.Tifrunner.gnm1.ann1.QNW6LA Arachis hypogaea HOM05D000461 ORTHO05D009768 1.5e-219 766.1 474 80.6
TWI39G0712 Tripterygium wilfordii HOM05D000461 ORTHO05D009768 5.6e-219 764.2 453 82.6
Manes.03G115700 Manihot esculenta HOM05D000461 ORTHO05D009768 7.3e-219 763.8 454 83.7
Ca_17659_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009768 9.5e-219 763.5 453 83.0
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 1.8e-217 759.2 450 82.7
Atru.chr2.2833 Acer truncatum HOM05D000461 ORTHO05D009768 3.0e-217 758.4 404 90.8
Glyma.12G147900 Glycine max HOM05D000461 ORTHO05D009768 8.9e-217 756.9 455 82.6
Rhsim04G0018400 Rhododendron simsii HOM05D000461 ORTHO05D009768 1.2e-216 756.5 478 78.9
Sopen07g031690 Solanum pennellii HOM05D000461 ORTHO05D009768 2.6e-216 755.4 453 81.7
VMungo1127G1042 Vigna mungo HOM05D000461 ORTHO05D009768 2.6e-216 755.4 427 85.5
Phvul.011G154500 Phaseolus vulgaris HOM05D000461 ORTHO05D009768 7.5e-216 753.8 425 85.9
Solyc07g063510.3 Solanum lycopersicum HOM05D000461 ORTHO05D009768 7.5e-216 753.8 453 81.7
Sed0023337 Sechium edule HOM05D000461 ORTHO05D009768 1.3e-215 753.1 454 80.2
PGSC0003DMG400019289 Solanum tuberosum HOM05D000461 ORTHO05D009768 1.3e-215 753.1 453 81.2
ECA236G2753 Erigeron canadensis HOM05D000461 ORTHO05D009768 2.9e-215 751.9 424 84.9
Peaxi162Scf01111g00017 Petunia axillaris HOM05D000461 ORTHO05D009768 3.2e-214 748.4 453 80.8
MBI02_g10553_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009768 2.7e-213 745.3 470 79.4
Sc03g0009640 Simmondsia chinensis HOM05D000461 ORTHO05D009768 5.9e-213 744.2 455 80.0
Lsat_1_v5_gn_7_106360 Lactuca sativa HOM05D000461 ORTHO05D009768 7.8e-213 743.8 454 81.3
CsaV3_3G044400 Cucumis sativus L. HOM05D000461 ORTHO05D009768 1.7e-212 742.7 457 79.9
Cpa.g.sc80.105 Carica papaya HOM05D000461 ORTHO05D009768 2.3e-212 742.3 405 88.1
HanXRQChr11g0330921 Helianthus annuus HOM05D000461 ORTHO05D009768 2.3e-212 742.3 426 83.6
Eucgr.H00422 Eucalyptus grandis HOM05D000461 ORTHO05D009768 1.1e-211 740.0 449 82.0
Ah.04g164990 Amaranthus hybridus HOM05D000461 ORTHO05D009768 7.3e-211 737.3 454 79.7
Cc05_g12580 Coffea canephora HOM05D000461 ORTHO05D009768 1.2e-210 736.5 467 78.6
Haze_09517 Corylus avellana HOM05D000461 ORTHO05D009768 1.2e-210 736.5 450 81.3
vmacro09551 Vaccinium macrocarpon HOM05D000461 ORTHO05D009768 1.1e-209 733.4 504 74.2
MSTRG.6849 Avicennia marina HOM05D000461 ORTHO05D009768 1.8e-209 732.6 452 80.3
SGA_v2.0_scaffold34G13718 Striga asiatica HOM05D000461 ORTHO05D009768 1.8e-209 732.6 459 78.9
Migut.M00870 Erythranthe guttata HOM05D000461 ORTHO05D009768 5.2e-209 731.1 463 78.4
CAN.G162.98 Capsicum annuum HOM05D000461 ORTHO05D009768 4.4e-208 728.0 484 76.0
Duzib213G0388 Durio zibethinus HOM05D000461 ORTHO05D009768 8.3e-207 723.8 433 81.8
Nitab4.5_0002565g0060 Nicotiana tabacum HOM05D000461 ORTHO05D009768 3.2e-206 721.8 450 79.6
AUR62015610 Chenopodium quinoa HOM05D000461 ORTHO05D009768 8.1e-202 707.2 496 72.2
Thecc.07G073000 Theobroma cacao HOM05D000461 ORTHO05D009768 1.1e-201 706.8 452 78.3
HPP92_016586 Vanilla planifolia HOM05D000461 ORTHO05D009768 5.2e-201 704.5 449 76.4
EL10Ac4g08080 Beta vulgaris HOM05D000461 ORTHO05D009768 2.3e-196 689.1 433 78.5
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 3.0e-196 688.7 440 79.3
Lj1C852T3 Lonicera japonica HOM05D000461 ORTHO05D009768 8.6e-196 687.2 454 76.9
CiPaw.11G175300 Carya illinoinensis HOM05D000461 ORTHO05D009768 2.5e-195 685.6 368 89.4
ClCG11G018420 Citrullus lanatus HOM05D000461 ORTHO05D009768 1.8e-193 679.5 453 74.2
SalBow8G3533 Salvia bowleyana HOM05D000461 ORTHO05D009768 5.8e-192 674.5 462 74.0
SEGI_18811 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 9.2e-190 667.2 427 74.0
AUR62029323 Chenopodium quinoa HOM05D000461 ORTHO05D009768 6.6e-188 661.0 471 71.1
Zm00001eb069190 Zea mays HOM05D000461 ORTHO05D009768 4.7e-186 654.8 411 76.4
Hund27427 Selenicereus undatus HOM05D000461 ORTHO05D009768 1.2e-184 650.2 442 74.0
unitig_747.g21565 Utricularia gibba HOM05D000461 ORTHO05D009768 2.0e-184 649.4 417 75.5
Nitab4.5_0000297g0070 Nicotiana tabacum HOM05D000461 ORTHO05D009768 2.9e-183 645.6 450 74.2
MELO3C018201.2 Cucumis melo HOM05D000461 ORTHO05D009768 9.3e-182 640.6 457 71.8
Mapoly0032s0012 Marchantia polymorpha HOM05D000461 ORTHO05D009768 9.3e-182 640.6 410 73.4
Pp3c15_6180 Physcomitrium patens HOM05D000461 ORTHO05D009768 1.8e-177 626.3 450 67.8
AagrBONN_evm.TU.Sc2ySwM_344.1693 Anthoceros agrestis HOM05D000461 ORTHO05D009768 2.5e-171 605.9 442 66.5
Psat7g047120 Pisum sativum HOM05D000461 ORTHO05D009768 5.3e-169 598.2 366 81.1
SMO137G0173 Selaginella moellendorffii HOM05D000461 ORTHO05D009768 7.6e-168 594.3 408 69.1
Oeu019359.1 Olea europaea HOM05D000461 ORTHO05D009768 6.2e-162 574.7 365 78.9
CBR_g31136 Chara braunii HOM05D000461 ORTHO05D009768 3.8e-159 565.5 409 65.0
CDE12G0333 Ceratophyllum demersum HOM05D000461 ORTHO05D009768 3.9e-156 555.4 362 74.3
Cre06.g301650 Chlamydomonas reinhardtii HOM05D000461 ORTHO05D009768 9.7e-131 471.1 425 54.8
PRCOL_00003908 Prasinoderma coloniale HOM05D000461 ORTHO05D009768 9.7e-123 444.5 393 57.0
GSVIVG01014420001 Vitis vinifera HOM05D000461 ORTHO05D009768 2.7e-112 409.8 228 86.0
Glyma.06G253602 Glycine max HOM05D000461 ORTHO05D009768 2.4e-105 386.7 243 77.8
Gohir.A01G068201 Gossypium hirsutum HOM05D000461 ORTHO05D009768 4.0e-92 342.8 236 76.3
Zm00001eb291490 Zea mays HOM05D000461 ORTHO05D009768 5.2e-76 289.3 183 76.5
Zm00001eb057620 Zea mays HOM05D000461 ORTHO05D009768 1.5e-75 287.7 183 76.0
Zm00001eb222780 Zea mays HOM05D000461 ORTHO05D009768 1.5e-75 287.7 183 76.0
Zm00001eb308580 Zea mays HOM05D000461 ORTHO05D009768 1.5e-75 287.7 183 76.0
Gohir.A01G068251 Gossypium hirsutum HOM05D000461 ORTHO05D009768 8.1e-69 265.4 140 91.4
ATR0274G001 Amborella trichopoda HOM05D000461 ORTHO05D009768 1.1e-68 265.0 146 85.6
SEGI_34047 Sequoiadendron giganteum HOM05D000461 ORTHO05D009768 1.3e-55 221.5 177 62.1
Os04g0636300 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009768 1.8e-47 194.5 140 69.3
GSVIVG01014419001 Vitis vinifera HOM05D000461 ORTHO05D009768 1.2e-35 155.2 143 62.2
Lalb_Chr19g0134431 Lupinus albus HOM05D000461 ORTHO05D038317 7.7e-19 99.4 87 59.8
arahy.Tifrunner.gnm1.ann1.AV15VC Arachis hypogaea HOM05D000296 ORTHO05D000175 5.7e-14 83.2 44 88.6
ATR0693G093 Amborella trichopoda HOM05D000461 ORTHO05D038317 2.9e-10 70.9 90 52.2
SEGI_16587 Sequoiadendron giganteum HOM05D000415 ORTHO05D385778 3.8e-10 70.5 89 43.8
Nn1g06725 Nelumbo nucifera HOM05D000461 ORTHO05D009768 1.5e-06 58.5 43 69.8


User provided reference genes

Program Settings