Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G187200 Prunus persica HOM05D007708 ORTHO05D009506 2.9e-63 245.0 117 100.0
MD03G1222500 Malus domestica HOM05D007708 ORTHO05D009506 2.3e-39 165.6 118 72.9
RcHm_v2.0_Chr5g0034861 Rosa chinensis HOM05D007708 ORTHO05D009506 7.2e-38 160.6 124 69.4
FAN16G0929 Fragaria x ananassa HOM05D007708 ORTHO05D009506 1.0e-36 156.8 124 68.5
FAN25G1391 Fragaria x ananassa HOM05D007708 ORTHO05D009506 4.0e-36 154.8 124 67.7
FAN21G3926 Fragaria x ananassa HOM05D007708 ORTHO05D009506 5.2e-36 154.5 124 67.7
FvH4_3g20710 Fragaria vesca HOM05D007708 ORTHO05D009506 2.0e-35 152.5 124 67.7
FAN11G2360 Fragaria x ananassa HOM05D007708 ORTHO05D009506 2.0e-35 152.5 124 67.7
MD11G1239800 Malus domestica HOM05D007708 ORTHO05D009506 2.8e-34 148.7 118 67.8
Gohir.A01G066900 Gossypium hirsutum HOM05D007708 ORTHO05D009506 1.5e-22 109.8 90 66.7
Gohir.D01G054100 Gossypium hirsutum HOM05D007708 ORTHO05D009506 1.9e-22 109.4 91 65.9
Gorai.002G073900 Gossypium raimondii HOM05D007708 ORTHO05D009506 1.9e-22 109.4 90 66.7
Duzib268G1443 Durio zibethinus HOM05D007708 ORTHO05D009506 4.3e-22 108.2 96 61.5
Potri.001G404500 Populus trichocarpa HOM05D007708 ORTHO05D009506 4.3e-22 108.2 91 63.7
Potri.011G123600 Populus trichocarpa HOM05D007708 ORTHO05D009506 2.8e-21 105.5 103 58.3
Ciclev10009880m.g Citrus clementina HOM05D007708 ORTHO05D009506 8.0e-21 104.0 89 64.0
Manes.03G114400 Manihot esculenta HOM05D007708 ORTHO05D009506 1.8e-20 102.8 69 72.5
QL08p019254 Quercus lobata HOM05D007708 ORTHO05D009506 2.3e-20 102.4 121 53.7
Gohir.D05G360000 Gossypium hirsutum HOM05D007708 ORTHO05D009506 4.0e-20 101.7 105 54.3
Gorai.009G432700 Gossypium raimondii HOM05D007708 ORTHO05D009506 4.0e-20 101.7 105 54.3
Gohir.A04G028100 Gossypium hirsutum HOM05D007708 ORTHO05D009506 2.0e-19 99.4 92 58.7
Haze_09495 Corylus avellana HOM05D007708 ORTHO05D009506 3.4e-19 98.6 90 63.3
CiPaw.11G174300 Carya illinoinensis HOM05D007708 ORTHO05D009506 9.8e-19 97.1 89 57.3
Thecc.07G075600 Theobroma cacao HOM05D007708 ORTHO05D009506 2.9e-18 95.5 89 57.3
VMungo1080G0096 Vigna mungo HOM05D007708 ORTHO05D009506 4.9e-18 94.7 75 68.0
Glyma.12G221200 Glycine max HOM05D007708 ORTHO05D009506 8.3e-18 94.0 75 68.0
Aa31LG8G2750 Aethionema arabicum HOM05D007708 ORTHO05D009506 1.1e-17 93.6 92 57.6
Phvul.005G084800 Phaseolus vulgaris HOM05D007708 ORTHO05D009506 1.4e-17 93.2 75 66.7
Ca_01817_v3 Cicer arietinum L. HOM05D007708 ORTHO05D009506 1.9e-17 92.8 68 67.6
Lj3g0000986 Lotus japonicus HOM05D007708 ORTHO05D009506 1.9e-17 92.8 100 55.0
Medtr2g080030 Medicago truncatula HOM05D007708 ORTHO05D009506 1.9e-17 92.8 116 47.4
TPR.G38977 Trifolium pratense HOM05D007708 ORTHO05D009506 4.1e-17 91.7 68 66.2
Cfa020536 Carpinus fangiana HOM05D007708 ORTHO05D009506 2.1e-16 89.4 93 58.1
Eucgr.F03340 Eucalyptus grandis HOM05D007708 ORTHO05D009506 2.1e-16 89.4 91 56.0
Psat5g246000 Pisum sativum HOM05D007708 ORTHO05D009506 2.7e-16 89.0 107 49.5
Aa31LG10G2210 Aethionema arabicum HOM05D007708 ORTHO05D009506 1.7e-15 86.3 79 59.5
THA.LOC104818058 Tarenaya hassleriana HOM05D007708 ORTHO05D009506 1.7e-15 86.3 97 50.5
Glyma.13G280400 Glycine max HOM05D007708 ORTHO05D009506 2.3e-15 85.9 75 64.0
Lalb_Chr07g0181711 Lupinus albus HOM05D007708 ORTHO05D009506 2.3e-15 85.9 87 57.5
TWI38G1724 Tripterygium wilfordii HOM05D007708 ORTHO05D009506 2.3e-15 85.9 119 49.6
THA.LOC104810490 Tarenaya hassleriana HOM05D007708 ORTHO05D009506 3.9e-15 85.1 96 52.1
Thhalv10012270m.g Eutrema salsugineum HOM05D007708 ORTHO05D009506 1.1e-14 83.6 87 52.9
Atru.chr2.2769 Acer truncatum HOM05D007708 ORTHO05D009506 9.5e-14 80.5 68 60.3
BcaB07g33383 Brassica carinata HOM05D007708 ORTHO05D009506 1.2e-13 80.1 79 55.7
BcaC08g43472 Brassica carinata HOM05D007708 ORTHO05D009506 1.6e-13 79.7 79 55.7
C06p08550 Brassica napus HOM05D007708 ORTHO05D009506 1.6e-13 79.7 79 55.7
BolC6t35934H Brassica oleracea HOM05D007708 ORTHO05D009506 1.6e-13 79.7 79 55.7
A06p01470 Brassica napus HOM05D007708 ORTHO05D009506 4.7e-13 78.2 76 55.3
BraA06t23368Z Brassica rapa HOM05D007708 ORTHO05D009506 4.7e-13 78.2 76 55.3
CARHR090570 Cardamine hirsuta HOM05D007708 ORTHO05D009506 1.1e-12 77.0 89 53.9
Carub.0003s1524 Capsella rubella HOM05D007708 ORTHO05D009506 2.3e-12 75.9 89 51.7
AT3G15518 Arabidopsis thaliana HOM05D007708 ORTHO05D009506 3.1e-12 75.5 89 51.7
COL.COLO4_09450 Corchorus olitorius HOM05D007708 ORTHO05D009506 4.0e-12 75.1 89 51.7
Sp3g13770 Schrenkiella parvula HOM05D007708 ORTHO05D009506 5.2e-12 74.7 89 52.8
Thhalv10021811m.g Eutrema salsugineum HOM05D007708 ORTHO05D009506 6.8e-12 74.3 89 51.7
AL3G28090 Arabidopsis lyrata HOM05D007708 ORTHO05D009506 8.9e-12 73.9 89 50.6
BcaB06g29586 Brassica carinata HOM05D007708 ORTHO05D009506 8.9e-12 73.9 89 52.8
BcaC05g28966 Brassica carinata HOM05D007708 ORTHO05D009506 8.9e-12 73.9 89 52.8
A05p33900 Brassica napus HOM05D007708 ORTHO05D009506 8.9e-12 73.9 89 52.8
C05p51610 Brassica napus HOM05D007708 ORTHO05D009506 8.9e-12 73.9 89 52.8
BolC5t33849H Brassica oleracea HOM05D007708 ORTHO05D009506 8.9e-12 73.9 89 52.8
BraA05t22212Z Brassica rapa HOM05D007708 ORTHO05D009506 8.9e-12 73.9 89 52.8
Sp1g39450 Schrenkiella parvula HOM05D000067 ORTHO05D000097 8.9e-12 73.9 88 48.9
BcaB04g20921 Brassica carinata HOM05D007708 ORTHO05D009506 4.4e-11 71.6 70 54.3
BcaC09g48516 Brassica carinata HOM05D007708 ORTHO05D009506 5.8e-11 71.2 67 53.7
BcaC09g48517 Brassica carinata HOM05D007708 ORTHO05D009506 5.8e-11 71.2 67 53.7
BolC1t04856H Brassica oleracea HOM05D007708 ORTHO05D009506 5.8e-11 71.2 67 53.7
Nn1g06676 Nelumbo nucifera HOM05D007708 ORTHO05D009506 1.3e-10 70.1 98 50.0
MBI02_g19253_MAGBIO Magnolia biondii HOM05D007708 ORTHO05D009506 2.2e-10 69.3 81 53.1
CSS0032536 Camellia sinensis var. sinensis HOM05D007708 ORTHO05D009506 6.4e-10 67.8 121 43.0
Glyma.06G249202 Glycine max HOM05D007708 ORTHO05D009506 6.4e-10 67.8 105 43.8
ClCG11G018300 Citrullus lanatus HOM05D007708 ORTHO05D009506 1.1e-09 67.0 86 50.0
TAR626G1828 Trochodendron aralioides HOM05D007708 ORTHO05D009506 1.9e-09 66.2 83 49.4
Aqoxy1G02627 Aquilegia oxysepala HOM05D007708 ORTHO05D009506 2.1e-08 62.8 82 43.9
CsaV3_3G044520 Cucumis sativus L. HOM05D007708 ORTHO05D009506 2.1e-08 62.8 100 43.0
Sc16g0006840 Simmondsia chinensis HOM05D007708 ORTHO05D009506 3.5e-08 62.0 60 56.7
MELO3C018234.2 Cucumis melo HOM05D007708 ORTHO05D009506 7.8e-08 60.8 86 46.5
BcaC09g48515 Brassica carinata HOM05D007708 ORTHO05D009506 6.6e-07 57.8 67 43.3
Rhsim06G0195000 Rhododendron simsii HOM05D007708 ORTHO05D009506 1.9e-06 56.2 51 56.9
DCAR_013081 Daucus carota HOM05D007708 ORTHO05D009506 2.5e-06 55.8 102 39.2


User provided reference genes

Program Settings