Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G185000 Prunus persica HOM05D007899 ORTHO05D010282 4.4e-138 494.6 244 100.0
RcHm_v2.0_Chr5g0034401 Rosa chinensis HOM05D007899 ORTHO05D010282 4.5e-42 175.6 242 42.1
Gohir.A12G121800 Gossypium hirsutum HOM05D007899 ORTHO05D010282 2.0e-37 160.2 238 40.3
Gorai.008G136400 Gossypium raimondii HOM05D007899 ORTHO05D010282 5.7e-37 158.7 238 39.9
Thecc.01G321600 Theobroma cacao HOM05D007899 ORTHO05D010282 1.1e-35 154.5 238 40.3
arahy.Tifrunner.gnm1.ann1.RIPR8S Arachis hypogaea HOM05D007899 ORTHO05D010282 2.4e-35 153.3 239 38.9
Gohir.D12G125400 Gossypium hirsutum HOM05D007899 ORTHO05D010282 3.1e-35 152.9 236 39.8
Nitab4.5_0004218g0020 Nicotiana tabacum HOM05D007899 ORTHO05D010282 3.5e-34 149.4 223 39.0
Lalb_Chr07g0184251 Lupinus albus HOM05D007899 ORTHO05D010282 1.7e-33 147.1 260 37.7
Nitab4.5_0000222g0210 Nicotiana tabacum HOM05D007899 ORTHO05D010282 2.9e-33 146.4 221 37.6
Peaxi162Scf00919g00048 Petunia axillaris HOM05D007899 ORTHO05D010282 3.8e-33 146.0 249 35.3
arahy.Tifrunner.gnm1.ann1.D5DV9J Arachis hypogaea HOM05D007899 ORTHO05D010282 1.1e-32 144.4 225 37.3
FAN11G1061 Fragaria x ananassa HOM05D007899 ORTHO05D010282 2.5e-32 143.3 271 32.5
FvH4_3g20500 Fragaria vesca HOM05D007899 ORTHO05D010282 3.3e-32 142.9 275 32.0
Prupe.4G184900 Prunus persica HOM05D007899 ORTHO05D010282 3.3e-32 142.9 151 51.7
arahy.Tifrunner.gnm1.ann1.GC5N30 Arachis hypogaea HOM05D007899 ORTHO05D010282 5.6e-32 142.1 239 36.4
RcHm_v2.0_Chr5g0034421 Rosa chinensis HOM05D007899 ORTHO05D010282 2.1e-31 140.2 258 34.1
Peaxi162Scf00919g00022 Petunia axillaris HOM05D007899 ORTHO05D010282 3.6e-31 139.4 259 36.3
arahy.Tifrunner.gnm1.ann1.4H8HXV Arachis hypogaea HOM05D007899 ORTHO05D010282 5.2e-30 135.6 239 36.0
FAN25G2466 Fragaria x ananassa HOM05D007899 ORTHO05D010282 8.9e-30 134.8 275 31.3
CAN.G100.25 Capsicum annuum HOM05D007899 ORTHO05D010282 2.2e-28 130.2 254 34.6
Solyc01g068040.1 Solanum lycopersicum HOM05D007899 ORTHO05D010282 4.1e-27 125.9 249 33.7
PGSC0003DMG400005212 Solanum tuberosum HOM05D007899 ORTHO05D010282 1.2e-26 124.4 219 35.6
Sopen01g029960 Solanum pennellii HOM05D007899 ORTHO05D010282 1.6e-26 124.0 232 34.1
Potri.002G185500 Populus trichocarpa HOM05D007899 ORTHO05D010282 6.6e-25 118.6 235 31.1
arahy.Tifrunner.gnm1.ann1.Q2IHDV Arachis hypogaea HOM05D007899 ORTHO05D010282 1.1e-22 111.3 181 34.8
FAN25G1092 Fragaria x ananassa HOM05D007899 ORTHO05D010282 3.4e-21 106.3 179 37.4
Actinidia25051 Actinidia chinensis HOM05D007899 ORTHO05D010282 2.9e-20 103.2 246 30.1
TAR362G0732 Trochodendron aralioides HOM05D007899 ORTHO05D010282 9.2e-19 98.2 239 28.5
MD04G1000100 Malus domestica HOM05D007899 ORTHO05D010282 1.2e-18 97.8 109 46.8
arahy.Tifrunner.gnm1.ann1.8PB9CU Arachis hypogaea HOM05D007899 ORTHO05D010282 1.0e-17 94.7 137 35.0
Aqoxy5G02752 Aquilegia oxysepala HOM05D007899 ORTHO05D010282 6.2e-15 85.5 204 27.5
Aqoxy2G02572 Aquilegia oxysepala HOM05D007899 ORTHO05D010282 4.0e-14 82.8 255 27.1
FAN25G1552 Fragaria x ananassa HOM05D007899 ORTHO05D010282 4.0e-14 82.8 242 26.4
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 6.8e-14 82.0 80 46.2
CAN.G100.24 Capsicum annuum HOM05D007899 ORTHO05D010282 5.8e-13 79.0 134 35.1
Aqoxy2G02614 Aquilegia oxysepala HOM05D007899 ORTHO05D010282 1.3e-12 77.8 261 21.8
Aqoxy2G02890 Aquilegia oxysepala HOM05D007899 ORTHO05D010282 2.9e-12 76.6 213 25.8
Lalb_Chr12g0203021 Lupinus albus HOM05D007899 ORTHO05D010282 1.9e-11 73.9 125 37.6
Sed0018455 Sechium edule HOM05D000886 ORTHO05D000525 4.1e-11 72.8 194 29.9
Solyc10g078200.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 3.5e-10 69.7 170 30.6
arahy.Tifrunner.gnm1.ann1.M0EGM5 Arachis hypogaea HOM05D007899 ORTHO05D010282 1.7e-09 67.4 72 41.7
Prupe.7G019000 Prunus persica HOM05D000886 ORTHO05D000525 3.0e-09 66.6 215 28.4
QL04p029020 Quercus lobata HOM05D007899 ORTHO05D010282 3.9e-09 66.2 181 25.4
QL07p013665 Quercus lobata HOM05D000886 ORTHO05D000525 6.6e-09 65.5 222 27.0
QL04p028890 Quercus lobata HOM05D000007 ORTHO05D000521 1.1e-08 64.7 181 24.3
TPR.G1559 Trifolium pratense HOM05D000886 ORTHO05D000525 1.9e-08 63.9 224 29.5
Nitab4.5_0000712g0220 Nicotiana tabacum HOM05D000886 ORTHO05D000525 4.3e-08 62.8 217 27.2
CANSAT64G2470 Cannabis sativa HOM05D007899 ORTHO05D010282 7.3e-08 62.0 213 26.3
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 9.5e-08 61.6 222 25.7
CDE12G0818 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 1.2e-07 61.2 229 25.3
Lsat_1_v5_gn_9_55780 Lactuca sativa HOM05D000886 ORTHO05D000525 1.6e-07 60.8 222 29.7
TPR.G1540 Trifolium pratense HOM05D000886 ORTHO05D000525 2.1e-07 60.5 173 30.6
QL09p046424 Quercus lobata HOM05D007899 ORTHO05D010282 4.7e-07 59.3 182 23.6
CDE12G0614 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 6.2e-07 58.9 185 27.0
Manes.08G161704 Manihot esculenta HOM05D000886 ORTHO05D000525 6.2e-07 58.9 173 27.2
Nitab4.5_0002225g0060 Nicotiana tabacum HOM05D000886 ORTHO05D000525 6.2e-07 58.9 209 26.8
Nitab4.5_0004310g0010 Nicotiana tabacum HOM05D000886 ORTHO05D000525 6.2e-07 58.9 209 25.8
PSO781G0173 Papaver somniferum HOM05D000886 ORTHO05D000525 6.2e-07 58.9 232 25.4
Peaxi162Scf00102g00087 Petunia axillaris HOM05D000886 ORTHO05D000525 6.2e-07 58.9 194 26.3
Dinv12103 Davidia involucrata HOM05D007899 ORTHO05D010282 8.1e-07 58.5 136 30.9
Manes.08G161900 Manihot esculenta HOM05D000886 ORTHO05D000525 8.1e-07 58.5 146 28.8
Aqoxy1G00577 Aquilegia oxysepala HOM05D025551 ORTHO05D010282 1.1e-06 58.2 167 28.7
CiPaw.09G051600 Carya illinoinensis HOM05D000886 ORTHO05D000525 1.1e-06 58.2 177 29.4
Aqoxy2G02684 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 1.8e-06 57.4 225 27.1
TPR.G1548 Trifolium pratense HOM05D000292 ORTHO05D000172 2.4e-06 57.0 223 28.7
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 3.1e-06 56.6 215 25.6
CANSAT64G2259 Cannabis sativa HOM05D007899 ORTHO05D010282 3.1e-06 56.6 164 26.8
Nitab4.5_0000712g0170 Nicotiana tabacum HOM05D000886 ORTHO05D000525 4.0e-06 56.2 209 26.8
CANSAT25G2445 Cannabis sativa HOM05D007899 ORTHO05D010282 6.8e-06 55.5 189 24.3
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 6.8e-06 55.5 210 29.0


User provided reference genes

Program Settings