Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G184600 Prunus persica HOM05D003094 ORTHO05D003482 2.4e-104 382.1 185 100.0
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 7.6e-74 280.8 157 86.0
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 6.9e-67 257.7 158 77.8
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 6.9e-67 257.7 158 77.8
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 6.9e-67 257.7 157 79.0
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 3.4e-66 255.4 155 76.8
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 1.3e-65 253.4 157 78.3
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.7e-65 253.1 158 76.6
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.9e-65 251.5 158 76.6
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.9e-65 251.5 157 76.4
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 6.4e-65 251.1 157 75.2
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.1e-64 250.4 157 76.4
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 1.4e-64 250.0 155 76.8
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.4e-64 250.0 157 75.8
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.9e-64 249.6 157 75.8
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 3.2e-64 248.8 157 73.9
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 4.2e-64 248.4 157 75.2
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 4.2e-64 248.4 157 75.2
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 5.5e-64 248.1 157 75.2
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 5.5e-64 248.1 157 74.5
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 9.3e-64 247.3 157 73.9
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.2e-63 246.9 155 74.8
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 1.6e-63 246.5 155 74.2
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 1.6e-63 246.5 157 74.5
Lalb_Chr08g0242311 Lupinus albus HOM05D003094 ORTHO05D003482 2.7e-63 245.7 157 73.2
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 3.5e-63 245.4 157 74.5
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 4.6e-63 245.0 155 73.5
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 4.6e-63 245.0 155 71.6
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 7.9e-63 244.2 157 73.2
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 1.0e-62 243.8 157 73.2
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 2.3e-62 242.7 155 74.2
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 3.0e-62 242.3 155 74.2
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.0e-62 242.3 157 73.9
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 3.0e-62 242.3 157 74.5
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 3.9e-62 241.9 155 74.2
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 3.9e-62 241.9 157 73.2
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 5.1e-62 241.5 157 73.2
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 6.7e-62 241.1 160 74.4
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 1.5e-61 240.0 157 73.2
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 1.9e-61 239.6 157 71.3
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 1.9e-61 239.6 155 74.2
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 3.3e-61 238.8 157 71.3
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 4.3e-61 238.4 158 71.5
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 1.3e-60 236.9 157 72.6
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 1.6e-60 236.5 155 71.0
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 1.6e-60 236.5 155 69.7
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 2.1e-60 236.1 155 71.0
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 2.1e-60 236.1 155 69.7
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 2.1e-60 236.1 157 69.4
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 2.1e-60 236.1 157 70.1
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 2.8e-60 235.7 157 70.7
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 2.8e-60 235.7 155 72.9
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 4.8e-60 235.0 157 70.7
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 6.2e-60 234.6 155 69.7
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 1.1e-59 233.8 157 71.3
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 1.1e-59 233.8 157 71.3
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.1e-59 233.8 157 72.0
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 2.4e-59 232.6 155 70.3
MSTRG.4516 Avicennia marina HOM05D003094 ORTHO05D003482 2.4e-59 232.6 155 69.7
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 3.1e-59 232.3 157 69.4
BcaC05g28647 Brassica carinata HOM05D003094 ORTHO05D003482 3.1e-59 232.3 157 70.7
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 3.1e-59 232.3 157 70.7
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 3.1e-59 232.3 157 70.7
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 3.1e-59 232.3 157 70.7
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 3.1e-59 232.3 157 68.8
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 5.3e-59 231.5 157 70.7
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 5.3e-59 231.5 157 70.1
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 6.9e-59 231.1 155 69.7
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 1.5e-58 229.9 155 70.3
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 5.8e-58 228.0 157 68.2
Os08g0513300 Oryza sativa ssp. japonica HOM05D003094 ORTHO05D003482 5.8e-58 228.0 159 67.3
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 1.3e-57 226.9 157 69.4
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 2.9e-57 225.7 157 68.2
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 3.8e-57 225.3 157 66.9
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 6.5e-57 224.6 155 68.4
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 8.4e-57 224.2 157 66.2
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 1.4e-56 223.4 156 69.2
HanXRQChr14g0446571 Helianthus annuus HOM05D003094 ORTHO05D003482 2.5e-56 222.6 157 63.7
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 3.2e-56 222.2 155 65.8
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 4.2e-56 221.9 158 65.8
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 4.2e-56 221.9 155 65.8
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 4.2e-56 221.9 155 65.8
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 9.3e-56 220.7 155 65.8
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 1.2e-55 220.3 157 68.8
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 1.6e-55 219.9 158 65.8
SalBow7G3604 Salvia bowleyana HOM05D003094 ORTHO05D003482 2.7e-55 219.2 159 66.7
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 2.7e-55 219.2 196 57.7
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 6.0e-55 218.0 157 65.0
Zm00001eb143930 Zea mays HOM05D003094 ORTHO05D003482 1.3e-54 216.9 159 65.4
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 2.3e-54 216.1 159 65.4
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 2.3e-54 216.1 159 65.4
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 2.3e-54 216.1 138 75.4
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 3.9e-54 215.3 158 65.2
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 1.1e-53 213.8 157 66.2
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 1.5e-53 213.4 157 65.0
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 3.3e-53 212.2 157 64.3
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 7.4e-53 211.1 157 62.4
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 4.8e-52 208.4 157 60.5
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.1e-51 207.2 169 59.2
HPP92_008848 Vanilla planifolia HOM05D003094 ORTHO05D003482 1.5e-50 203.4 158 62.7
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 5.9e-50 201.4 157 66.9
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 7.6e-50 201.1 158 61.4
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 1.0e-49 200.7 155 61.3
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 4.3e-45 185.3 140 62.9
Nitab4.5_0008639g0020 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.8e-43 179.9 139 61.2
Oeu010081.1 Olea europaea HOM05D003094 ORTHO05D003482 1.2e-39 167.2 137 58.4
RcHm_v2.0_Chr2g0128191 Rosa chinensis HOM05D003094 ORTHO05D003482 5.0e-33 145.2 76 86.8
SEGI_02552 Sequoiadendron giganteum HOM05D003094 ORTHO05D003482 4.7e-31 138.7 154 47.4
TAR622G0867 Trochodendron aralioides HOM05D003094 ORTHO05D009164 8.2e-28 127.9 154 44.2
Gohir.A06G136104 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.9e-26 121.7 93 65.6
Mapoly0002s0206 Marchantia polymorpha HOM05D003094 ORTHO05D003482 1.4e-19 100.5 71 66.2
Pp3c18_10090 Physcomitrium patens HOM05D003094 ORTHO05D003482 4.1e-19 99.0 71 63.4
CBR_g23797 Chara braunii HOM05D003094 ORTHO05D003482 9.4e-16 87.8 79 57.0
SMO367G0461 Selaginella moellendorffii HOM05D003094 ORTHO05D003482 3.1e-11 72.8 142 35.9
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 1.9e-08 63.5 42 71.4


User provided reference genes

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