Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 9.7e-195 683.3 352 100.0
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 9.8e-147 523.9 323 84.2
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 8.3e-146 520.8 323 83.6
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 5.0e-143 511.5 322 82.3
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.3e-142 508.8 322 82.3
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 7.5e-139 497.7 321 81.0
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 3.2e-129 465.7 323 74.6
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 6.0e-128 461.5 320 72.8
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 6.0e-128 461.5 324 72.2
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 2.5e-126 456.1 323 72.4
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 4.3e-126 455.3 319 72.4
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 1.2e-125 453.8 321 72.3
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 8.1e-125 451.1 322 70.5
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 8.1e-125 451.1 320 70.6
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 2.3e-124 449.5 322 71.1
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.5e-123 446.8 336 69.0
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 5.8e-123 444.9 327 71.6
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 5.8e-123 444.9 322 68.3
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 7.6e-123 444.5 327 71.6
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 8.4e-122 441.0 324 70.7
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 1.4e-121 440.3 325 71.1
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.1e-121 438.7 320 69.4
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 9.2e-121 437.6 322 70.2
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.2e-120 437.2 322 71.1
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 1.2e-120 437.2 321 70.1
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 2.7e-120 436.0 321 70.4
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 7.8e-120 434.5 323 70.6
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 7.8e-120 434.5 313 71.9
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 8.6e-119 431.0 323 67.2
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 8.6e-119 431.0 329 69.0
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 1.5e-118 430.3 327 67.0
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 1.2e-117 427.2 254 82.7
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.2e-117 427.2 323 70.3
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 2.1e-117 426.4 320 70.3
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 2.8e-117 426.0 324 69.1
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 4.7e-117 425.2 323 69.7
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 6.2e-117 424.9 254 81.9
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 8.1e-117 424.5 327 68.5
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.4e-116 423.7 323 68.4
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 1.8e-116 423.3 322 66.8
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 2.4e-116 422.9 275 74.5
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 3.1e-116 422.5 321 68.5
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 4.0e-116 422.2 332 67.5
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 6.8e-116 421.4 322 66.5
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 1.5e-115 420.2 318 68.2
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 2.6e-115 419.5 323 66.3
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 3.4e-115 419.1 269 75.8
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 4.4e-115 418.7 342 63.7
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 7.6e-115 417.9 325 66.5
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 7.6e-115 417.9 328 66.2
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 9.9e-115 417.5 325 66.5
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.7e-114 416.8 320 66.6
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 2.9e-114 416.0 275 74.5
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 3.8e-114 415.6 320 65.6
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 6.4e-114 414.8 326 65.0
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.1e-113 414.1 325 65.8
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.4e-113 413.7 324 64.5
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.9e-113 413.3 324 65.7
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 2.4e-113 412.9 326 66.9
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 5.4e-113 411.8 324 64.5
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 9.3e-113 411.0 290 69.0
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.2e-112 410.6 319 66.8
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.2e-112 410.6 236 86.4
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 1.2e-112 410.6 322 64.9
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.1e-112 409.8 327 65.7
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 1.0e-111 407.5 321 64.2
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.0e-111 407.5 322 65.2
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 2.3e-111 406.4 322 66.8
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 2.3e-111 406.4 325 65.2
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 8.7e-111 404.4 292 70.2
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 8.7e-111 404.4 362 60.2
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 1.1e-110 404.1 333 64.0
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 3.1e-108 396.0 325 64.9
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 9.0e-108 394.4 323 65.0
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 3.4e-107 392.5 285 68.1
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 3.4e-107 392.5 299 66.2
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 2.2e-106 389.8 300 65.0
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 1.1e-105 387.5 270 69.3
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 2.7e-104 382.9 306 65.0
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 6.0e-104 381.7 324 61.7
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.7e-103 380.2 274 67.5
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 3.9e-103 379.0 300 63.7
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 3.9e-103 379.0 269 74.0
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 8.7e-103 377.9 237 77.2
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 5.6e-102 375.2 212 87.7
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.3e-101 374.0 324 61.4
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 8.1e-101 371.3 344 58.4
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.8e-100 370.2 237 76.8
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.2e-99 367.5 234 75.6
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 1.3e-98 364.0 250 69.2
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 2.2e-98 363.2 322 61.8
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.5e-91 340.5 212 76.9
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.5e-91 340.5 300 59.7
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.5e-91 340.5 288 62.5
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 7.6e-91 338.2 269 63.6
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.9e-89 333.6 318 56.6
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 4.2e-89 332.4 251 64.9
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 2.8e-85 319.7 397 48.9
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 2.5e-78 296.6 343 48.1
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 2.6e-75 286.6 217 65.4
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 1.9e-73 280.4 350 45.1
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 4.2e-73 279.3 248 61.3
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 5.1e-71 272.3 331 45.9
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.3e-66 257.7 243 53.1
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 1.9e-65 253.8 257 51.4
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.8e-60 237.3 148 77.7
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 7.0e-52 208.8 276 40.9
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.5e-49 200.3 129 72.1
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 4.2e-41 172.9 105 80.0
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.3e-33 146.4 88 83.0
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.6e-32 143.3 88 81.8
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 5.4e-28 129.4 81 79.0
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 3.2e-20 103.6 72 68.1
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.0e-19 99.4 65 64.6
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.3e-18 97.4 64 65.6
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 2.3e-18 97.4 261 30.7
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 1.5e-09 68.2 158 39.9
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 2.1e-08 64.3 36 80.6
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 4.0e-07 60.1 35 77.1


User provided reference genes

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