Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 9.3e-253 876.3 422 100.0
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.7e-233 812.4 421 91.9
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 1.3e-222 776.2 422 89.6
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 4.2e-221 771.2 419 86.9
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.6e-220 768.1 422 83.9
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 6.7e-219 763.8 426 84.3
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.2e-217 758.8 423 83.0
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 8.2e-217 756.9 421 83.6
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 5.3e-216 754.2 419 84.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.3e-214 749.6 422 82.5
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 1.7e-214 749.2 423 81.3
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 8.5e-214 746.9 423 80.6
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 2.5e-213 745.3 422 82.2
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 3.2e-213 745.0 409 84.6
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 5.5e-213 744.2 423 80.4
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.7e-212 741.9 424 80.0
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.6e-212 741.5 424 80.7
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 4.7e-212 741.1 423 80.1
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 6.1e-212 740.7 421 82.2
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 2.3e-211 738.8 427 80.6
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 9.8e-210 733.4 418 83.3
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 9.8e-210 733.4 413 83.5
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 9.8e-210 733.4 425 80.2
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 1.3e-209 733.0 425 80.0
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.1e-208 729.9 424 81.8
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 1.4e-208 729.6 425 78.6
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 3.1e-208 728.4 412 81.3
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 3.1e-208 728.4 423 79.9
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.0e-206 723.4 424 79.0
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 3.8e-206 721.5 423 79.4
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 8.6e-206 720.3 412 80.8
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.5e-205 719.5 423 78.3
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 2.8e-204 715.3 419 77.8
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 3.6e-204 714.9 423 77.5
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.0e-203 713.4 423 77.5
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.4e-203 713.0 423 77.5
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.4e-203 713.0 423 78.0
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 2.3e-203 712.2 413 78.9
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 3.0e-203 711.8 423 78.5
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 5.2e-203 711.1 423 77.3
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 8.8e-203 710.3 423 76.8
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.2e-202 709.9 423 77.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.2e-202 709.9 423 77.3
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.5e-202 709.5 419 77.1
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.5e-202 709.5 419 80.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 4.4e-202 708.0 423 77.3
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 5.7e-202 707.6 423 77.3
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 7.5e-202 707.2 424 76.2
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 7.5e-202 707.2 424 75.9
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 9.8e-202 706.8 417 77.9
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.3e-201 706.4 423 76.8
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.3e-201 706.4 419 78.5
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 6.3e-201 704.1 422 77.0
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 1.6e-199 699.5 425 75.5
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 2.0e-199 699.1 421 77.7
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 4.5e-199 698.0 423 77.5
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 5.9e-199 697.6 405 79.5
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 7.8e-199 697.2 422 76.5
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.7e-198 696.0 425 73.9
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 6.6e-198 694.1 424 75.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.6e-196 689.5 413 79.9
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 6.1e-196 687.6 422 73.5
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 3.0e-195 685.3 540 64.1
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 8.9e-195 683.7 423 76.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 7.5e-194 680.6 424 73.1
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 9.8e-194 680.2 402 78.1
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.2e-193 679.1 425 76.0
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 3.7e-193 678.3 450 71.3
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 4.9e-193 677.9 422 74.6
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 8.3e-193 677.2 422 75.1
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 7.0e-192 674.1 422 74.9
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 9.2e-192 673.7 411 74.7
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.2e-191 673.3 425 75.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 6.6e-190 667.5 422 71.3
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 4.3e-189 664.8 408 74.3
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.8e-187 659.4 395 75.7
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 6.8e-187 657.5 412 73.1
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.5e-186 656.4 424 71.0
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 2.2e-185 652.5 434 70.7
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.0e-182 643.7 468 66.7
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 5.6e-181 637.9 411 73.0
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.3e-177 626.7 409 70.4
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.3e-174 615.9 458 66.8
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 1.2e-172 610.1 421 66.3
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 4.4e-170 601.7 411 69.1
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.1e-167 592.8 386 72.3
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.8e-164 582.4 412 68.9
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.7e-161 573.2 423 65.7
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 1.3e-158 563.5 379 71.5
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 3.0e-158 562.4 387 69.0
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 9.0e-155 550.8 312 80.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 1.4e-152 543.5 387 71.3
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.6e-148 530.0 313 76.4
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.3e-142 510.4 423 62.6
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 5.0e-97 359.0 214 76.6
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.6e-95 354.0 343 45.2
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 2.3e-94 350.1 204 78.4
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 3.4e-93 346.3 203 76.8
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.6e-90 337.4 346 46.2
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 1.9e-88 330.5 347 43.8
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 6.8e-78 295.4 367 38.4
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 2.1e-63 247.3 280 41.4
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 4.4e-45 186.4 106 77.4
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.9e-40 171.0 103 75.7
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 3.6e-39 166.8 85 89.4
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.8e-38 164.5 106 72.6
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.8e-38 164.5 106 72.6
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 6.9e-38 162.5 103 72.8
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 8.2e-23 112.5 83 71.1
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 3.7e-15 87.0 49 77.6
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.4e-14 84.3 49 75.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.1e-14 83.6 50 72.0
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.9e-11 74.7 48 68.8
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.6e-10 71.6 63 54.0
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 3.9e-09 67.0 45 68.9
FAN21G2570 Fragaria x ananassa HOM05D011847 ORTHO05D013847 5.3e-06 56.6 47 59.6


User provided reference genes

Program Settings