Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 3.1e-246 854.7 449 100.0
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 1.8e-145 520.0 464 68.1
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 3.9e-132 475.7 465 64.3
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 5.6e-131 471.9 473 64.5
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.1e-129 466.1 474 63.5
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 5.3e-129 465.3 472 62.9
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 4.5e-128 462.2 475 63.8
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 3.0e-124 449.5 476 60.7
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 2.8e-122 443.0 469 59.7
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 5.0e-103 379.0 460 52.6
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 2.9e-87 326.6 468 47.4
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 1.2e-85 321.2 461 47.7
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 1.4e-84 317.8 472 47.5
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 1.2e-83 314.7 460 45.7
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 2.0e-83 313.9 457 49.7
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 5.7e-83 312.4 458 45.2
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 9.7e-83 311.6 457 49.0
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.8e-81 307.4 455 48.4
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 7.0e-81 305.4 464 46.6
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 9.1e-81 305.1 473 46.5
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.5e-80 303.1 456 48.2
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.7e-79 300.8 468 44.0
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.5e-78 297.7 407 51.1
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 1.5e-78 297.7 451 46.1
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 1.5e-78 297.7 455 50.3
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 5.5e-78 295.8 418 49.3
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 7.2e-78 295.4 453 47.7
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.1e-77 293.9 458 46.1
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 6.1e-77 292.4 455 44.4
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 5.2e-76 289.3 465 44.1
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.8e-74 282.7 467 43.5
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 5.0e-71 272.7 473 44.8
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 7.2e-70 268.9 455 44.0
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.5e-67 261.2 439 43.7
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 4.5e-64 249.6 454 40.7
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 5.9e-64 249.2 467 40.9
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.7e-63 247.7 454 42.3
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.9e-63 246.9 459 41.6
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 3.9e-63 246.5 477 41.1
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 2.5e-62 243.8 453 42.4
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 6.1e-61 239.2 478 42.5
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 1.0e-60 238.4 364 46.2
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 2.0e-59 234.2 464 41.4
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 9.8e-59 231.9 464 40.9
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 3.7e-58 229.9 496 38.1
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 3.2e-57 226.9 332 48.8
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 3.2e-57 226.9 460 42.8
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 3.2e-57 226.9 427 40.7
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 5.4e-57 226.1 466 42.1
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 9.2e-57 225.3 460 42.6
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 4.6e-56 223.0 430 42.8
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 4.3e-54 216.5 463 40.0
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 9.5e-54 215.3 223 56.1
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 1.6e-53 214.5 462 39.8
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 3.6e-53 213.4 466 40.6
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.1e-52 211.8 402 40.5
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 4.0e-52 209.9 464 39.9
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 4.0e-52 209.9 480 39.4
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 5.2e-52 209.5 457 42.2
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 8.9e-52 208.8 454 41.2
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 2.6e-51 207.2 460 39.3
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 4.4e-51 206.5 456 39.5
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 9.8e-51 205.3 460 40.0
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.7e-50 204.5 472 37.5
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 2.9e-50 203.8 463 39.7
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 3.7e-50 203.4 459 36.8
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 1.9e-49 201.1 453 40.0
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 5.4e-49 199.5 456 39.9
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 5.4e-49 199.5 426 40.1
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 5.4e-49 199.5 374 39.8
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 9.2e-49 198.7 462 38.7
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 2.1e-48 197.6 469 38.6
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.7e-48 197.2 441 38.5
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 2.3e-47 194.1 421 38.7
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 3.0e-47 193.7 438 39.0
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 3.0e-47 193.7 471 35.9
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 6.6e-47 192.6 451 36.6
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 1.2e-45 188.3 478 35.8
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 6.2e-45 186.0 455 38.2
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 1.8e-44 184.5 477 35.8
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.2e-43 181.8 473 35.1
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 1.3e-42 178.3 439 35.8
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 2.2e-42 177.6 259 45.6
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 2.2e-42 177.6 454 37.2
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 6.4e-42 176.0 426 38.5
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 5.4e-41 172.9 457 36.3
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 5.4e-41 172.9 476 38.4
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 3.5e-40 170.2 459 34.9
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 6.0e-40 169.5 480 35.8
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 1.3e-39 168.3 466 35.4
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 5.1e-39 166.4 472 36.4
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 5.6e-38 162.9 426 35.2
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 9.6e-38 162.2 430 36.3
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.1e-37 161.0 285 41.4
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 1.4e-36 158.3 455 35.8
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 3.1e-36 157.1 452 34.1
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 6.8e-36 156.0 315 39.7
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 6.8e-36 156.0 452 34.3
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 2.9e-34 150.6 457 32.4
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 4.2e-33 146.7 218 45.0
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 7.1e-33 146.0 400 33.0
Phvul.011G157100 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 9.3e-33 145.6 421 38.2
VMungo1127G1756 Vigna mungo HOM05D006105 ORTHO05D006345 1.3e-31 141.7 366 37.4
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 4.3e-30 136.7 426 32.6
Gohir.A13G148200 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.1e-29 134.4 329 35.3
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 8.1e-29 132.5 437 34.8
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 8.1e-29 132.5 352 35.2
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 8.1e-29 132.5 284 37.3
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 5.3e-28 129.8 429 31.9
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 5.8e-27 126.3 464 31.5
Nn1g04330 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.4e-25 120.9 280 40.4
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.4e-25 120.9 214 39.3
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 4.2e-25 120.2 426 30.3
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 9.3e-25 119.0 461 31.0
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 9.3e-25 119.0 443 33.0
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.1e-22 112.1 286 36.4
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 4.3e-22 110.2 443 28.7
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 7.3e-22 109.4 562 27.9
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 8.1e-21 105.9 460 29.6
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.4e-20 104.4 343 33.2
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.3e-20 103.2 462 30.5
CANSAT35G1552 Cannabis sativa HOM05D006105 ORTHO05D006345 1.2e-19 102.1 464 31.7
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 3.4e-19 100.5 378 31.7
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 4.5e-19 100.1 433 28.9
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 2.2e-18 97.8 438 29.0
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 1.4e-17 95.1 250 37.6
Sopen10g003350 Solanum pennellii HOM05D016660 ORTHO05D006345 9.3e-17 92.4 206 37.9
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 3.9e-15 87.0 477 27.3
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.9e-14 84.7 190 34.7
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 2.5e-14 84.3 476 26.7
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 1.6e-13 81.6 451 27.9
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 1.8e-12 78.2 127 40.2
Solyc10g007156.2 Solanum lycopersicum HOM05D016660 ORTHO05D006345 2.4e-12 77.8 191 36.1
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 1.1e-09 68.9 439 25.3
HanXRQChr17g0545011 Helianthus annuus HOM05D006105 ORTHO05D006345 3.2e-09 67.4 187 35.3
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 4.2e-09 67.0 440 24.1
GSVIVG01021165001 Vitis vinifera HOM05D006105 ORTHO05D006345 4.2e-09 67.0 433 27.7
Cfa000566 Carpinus fangiana HOM05D038757 ORTHO05D010890 7.1e-09 66.2 203 31.0
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 1.2e-08 65.5 283 28.3
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 1.6e-08 65.1 283 27.9
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 1.9e-06 58.2 466 27.5
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 1.9e-06 58.2 446 24.0
MBI06_g46086_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 1.9e-06 58.2 149 36.2
MBI06_g40465_MAGBIO Magnolia biondii HOM05D026394 ORTHO05D030051 3.3e-06 57.4 151 38.4
SEGI_16969 Sequoiadendron giganteum HOM05D016559 ORTHO05D019650 4.3e-06 57.0 284 29.6


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