Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 3.8e-102 374.8 182 100.0
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 1.6e-55 219.9 185 65.9
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 1.6e-52 209.9 190 62.1
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 5.6e-45 184.9 186 59.7
FAN16G3477 Fragaria x ananassa HOM05D015893 ORTHO05D019166 9.8e-42 174.1 190 57.9
FvH4_3g16930 Fragaria vesca HOM05D015893 ORTHO05D019166 2.9e-41 172.6 190 57.4
FAN11G0710 Fragaria x ananassa HOM05D015893 ORTHO05D019166 2.9e-41 172.6 190 57.4
FAN21G1907 Fragaria x ananassa HOM05D015893 ORTHO05D019166 4.3e-37 158.7 190 54.2
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.9e-16 90.1 191 37.2
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 4.6e-15 85.5 180 36.1
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 6.0e-15 85.1 191 36.1
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 8.7e-14 81.3 180 35.0
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.5e-13 80.5 180 37.2
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 3.3e-13 79.3 189 31.7
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 2.1e-12 76.6 156 38.5
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 2.8e-12 76.3 182 32.4
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 3.6e-12 75.9 151 39.1
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 8.1e-12 74.7 195 31.8
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 8.1e-12 74.7 179 34.6
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 1.4e-11 73.9 190 30.0
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.8e-11 73.6 159 35.8
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 4.0e-11 72.4 178 34.8
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 6.9e-11 71.6 176 32.4
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.2e-10 70.9 179 33.0
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.5e-10 70.5 144 33.3
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 2.0e-10 70.1 184 30.4
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.0e-10 70.1 179 32.4
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 2.0e-10 70.1 181 29.8
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.6e-10 69.7 186 33.3
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.6e-10 69.7 195 31.3
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 2.6e-10 69.7 158 36.7
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 7.6e-10 68.2 184 32.6
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.3e-09 67.4 156 35.9
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 1.7e-09 67.0 190 28.4
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 2.2e-09 66.6 178 25.8
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 2.9e-09 66.2 153 33.3
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 3.8e-09 65.9 156 35.3
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 3.8e-09 65.9 156 35.3
Potri.001G379300 Populus trichocarpa HOM05D015893 ORTHO05D009674 3.8e-09 65.9 182 34.6
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 4.9e-09 65.5 184 32.1
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 4.9e-09 65.5 183 30.1
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.1e-08 64.3 179 33.5
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 1.1e-08 64.3 153 34.0
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.4e-08 63.9 156 34.6
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.9e-08 63.5 177 31.6
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 2.4e-08 63.2 181 31.5
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 9.3e-08 61.2 175 32.6
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 1.6e-07 60.5 189 28.6
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.6e-07 60.5 152 32.2
Nitab4.5_0002209g0210 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.7e-07 59.7 89 39.3
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 6.0e-07 58.5 152 29.6
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 2.3e-06 56.6 159 28.3
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 6.7e-06 55.1 197 27.9
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 6.7e-06 55.1 190 29.5


User provided reference genes

Program Settings