Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G147600 Prunus persica HOM05D007132 ORTHO05D009120 6.5e-170 600.5 279 100.0
MD05G1209900 Malus domestica HOM05D007132 ORTHO05D009120 2.5e-153 545.4 278 91.0
Cfa012869 Carpinus fangiana HOM05D007132 ORTHO05D009120 9.9e-126 453.8 287 74.9
CiPaw.11G075400 Carya illinoinensis HOM05D007132 ORTHO05D009120 4.9e-125 451.4 282 74.5
FvH4_3g16420 Fragaria vesca HOM05D007132 ORTHO05D009120 4.1e-124 448.4 277 76.5
FAN11G4000 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.6e-123 446.4 279 76.0
Haze_08441 Corylus avellana HOM05D007132 ORTHO05D009120 3.5e-123 445.3 285 73.7
RcHm_v2.0_Chr5g0027441 Rosa chinensis HOM05D007132 ORTHO05D009120 3.5e-123 445.3 279 76.0
Phvul.002G120400 Phaseolus vulgaris HOM05D007132 ORTHO05D009120 6.6e-122 441.0 277 71.5
VMungo1215G2638 Vigna mungo HOM05D007132 ORTHO05D009120 9.6e-121 437.2 278 71.6
FAN25G2365 Fragaria x ananassa HOM05D007132 ORTHO05D009120 1.6e-120 436.4 279 74.6
Glyma.11G089600 Glycine max HOM05D007132 ORTHO05D009120 6.2e-120 434.5 275 72.7
TWI75G0244 Tripterygium wilfordii HOM05D007132 ORTHO05D009120 6.9e-119 431.0 280 70.7
CANSAT11G0857 Cannabis sativa HOM05D007132 ORTHO05D009120 1.2e-118 430.3 284 71.5
Lj2g0003748 Lotus japonicus HOM05D007132 ORTHO05D009120 2.6e-118 429.1 278 72.7
QL12p004376 Quercus lobata HOM05D007132 ORTHO05D009120 1.3e-117 426.8 285 69.5
Atru.chr8.2638 Acer truncatum HOM05D007132 ORTHO05D009120 8.4e-117 424.1 280 68.9
PGR042G0795 Punica granatum HOM05D007132 ORTHO05D009120 3.2e-116 422.2 282 68.8
Manes.S095221 Manihot esculenta HOM05D007132 ORTHO05D009120 2.7e-115 419.1 283 68.6
vmacro00083 Vaccinium macrocarpon HOM05D007132 ORTHO05D009120 1.7e-114 416.4 279 70.3
Nn1g09371 Nelumbo nucifera HOM05D007132 ORTHO05D009120 3.0e-114 415.6 295 67.1
EL10Ac2g04081 Beta vulgaris HOM05D007132 ORTHO05D009120 3.9e-114 415.2 280 67.5
Eucgr.E01138 Eucalyptus grandis HOM05D007132 ORTHO05D009120 3.9e-114 415.2 288 65.6
AUR62009339 Chenopodium quinoa HOM05D007132 ORTHO05D009120 8.7e-114 414.1 279 67.7
Lalb_Chr05g0215041 Lupinus albus HOM05D007132 ORTHO05D009120 8.7e-114 414.1 286 68.5
arahy.Tifrunner.gnm1.ann1.63YFX7 Arachis hypogaea HOM05D007132 ORTHO05D009120 1.5e-113 413.3 289 68.2
arahy.Tifrunner.gnm1.ann1.WE0KUF Arachis hypogaea HOM05D007132 ORTHO05D009120 1.5e-113 413.3 289 68.2
Thecc.09G252800 Theobroma cacao HOM05D007132 ORTHO05D009120 2.5e-113 412.5 278 70.9
TPR.G5247 Trifolium pratense HOM05D007132 ORTHO05D009120 2.5e-113 412.5 279 68.1
Psat2g145880 Pisum sativum HOM05D007132 ORTHO05D009120 3.3e-113 412.1 279 68.5
Actinidia32785 Actinidia chinensis HOM05D007132 ORTHO05D009120 4.3e-113 411.8 279 69.5
Duzib168G0014 Durio zibethinus HOM05D007132 ORTHO05D009120 1.6e-112 409.8 279 69.9
Sc01g0005800 Simmondsia chinensis HOM05D007132 ORTHO05D009120 1.6e-112 409.8 282 66.7
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 6.2e-112 407.9 283 66.4
Potri.009G025400 Populus trichocarpa HOM05D007132 ORTHO05D009120 4.0e-111 405.2 280 67.1
Sabra09G0016800 Salix brachista HOM05D007132 ORTHO05D009120 5.3e-111 404.8 280 67.9
Hund11034 Selenicereus undatus HOM05D007132 ORTHO05D009120 6.9e-111 404.4 283 66.4
CDE02G3577 Ceratophyllum demersum HOM05D007132 ORTHO05D009120 9.0e-111 404.1 279 66.3
Medtr5g025190 Medicago truncatula HOM05D007132 ORTHO05D009120 9.0e-111 404.1 280 66.8
Potri.001G233200 Populus trichocarpa HOM05D007132 ORTHO05D009120 1.5e-110 403.3 280 68.6
Ciclev10031829m.g Citrus clementina HOM05D007132 ORTHO05D009120 2.0e-110 402.9 289 65.4
Gohir.D09G105701 Gossypium hirsutum HOM05D007132 ORTHO05D009120 2.0e-110 402.9 278 69.1
Gorai.006G123100 Gossypium raimondii HOM05D007132 ORTHO05D009120 2.0e-110 402.9 278 69.1
Nitab4.5_0000030g0380 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.6e-110 402.5 279 66.3
BraA06t25207Z Brassica rapa HOM05D007132 ORTHO05D009120 4.5e-110 401.7 279 64.9
COL.COLO4_33243 Corchorus olitorius HOM05D007132 ORTHO05D009120 7.6e-110 401.0 278 68.7
A06p21200 Brassica napus HOM05D007132 ORTHO05D009120 1.7e-109 399.8 282 63.8
Gohir.A09G109100 Gossypium hirsutum HOM05D007132 ORTHO05D009120 2.2e-109 399.4 278 68.7
Lj8A344T21 Lonicera japonica HOM05D007132 ORTHO05D009120 1.1e-108 397.1 342 55.8
Lj8C1T2 Lonicera japonica HOM05D007132 ORTHO05D009120 1.9e-108 396.4 342 55.6
Nitab4.5_0004157g0010 Nicotiana tabacum HOM05D007132 ORTHO05D009120 2.4e-108 396.0 279 66.3
PSO541G5430 Papaver somniferum HOM05D007132 ORTHO05D009120 3.2e-108 395.6 289 64.4
Aqoxy3G02733 Aquilegia oxysepala HOM05D007132 ORTHO05D009120 9.3e-108 394.0 287 64.5
CSS0020867 Camellia sinensis var. sinensis HOM05D007132 ORTHO05D009120 2.7e-107 392.5 278 66.9
Oeu046789.1 Olea europaea HOM05D007132 ORTHO05D009120 6.0e-107 391.3 280 65.0
Sopen08g024160 Solanum pennellii HOM05D007132 ORTHO05D009120 1.3e-106 390.2 280 64.3
BcaC01g01945 Brassica carinata HOM05D007132 ORTHO05D009120 1.8e-106 389.8 282 62.8
BolC3t19289H Brassica oleracea HOM05D007132 ORTHO05D009120 1.8e-106 389.8 282 62.8
Lsat_1_v5_gn_6_15181 Lactuca sativa HOM05D007132 ORTHO05D009120 2.3e-106 389.4 285 64.2
PGSC0003DMG400001970 Solanum tuberosum HOM05D007132 ORTHO05D009120 2.3e-106 389.4 280 64.3
DCAR_028364 Daucus carota HOM05D007132 ORTHO05D009120 3.0e-106 389.0 282 64.2
MBI04_g06282_MAGBIO Magnolia biondii HOM05D007132 ORTHO05D009120 3.9e-106 388.7 278 65.8
Solyc08g075510.4 Solanum lycopersicum HOM05D007132 ORTHO05D009120 6.7e-106 387.9 280 63.9
C03p70370 Brassica napus HOM05D007132 ORTHO05D009120 1.1e-105 387.1 280 62.5
Thhalv10002595m.g Eutrema salsugineum HOM05D007132 ORTHO05D009120 1.9e-105 386.3 277 64.6
CARHR154210 Cardamine hirsuta HOM05D007132 ORTHO05D009120 2.5e-105 386.0 281 61.2
Sp2g03890 Schrenkiella parvula HOM05D007132 ORTHO05D009120 3.3e-105 385.6 281 63.0
BcaB01g01051 Brassica carinata HOM05D007132 ORTHO05D009120 2.8e-104 382.5 282 62.8
Cc08_g05480 Coffea canephora HOM05D007132 ORTHO05D009120 4.8e-104 381.7 289 61.6
Aa31LG9G15710 Aethionema arabicum HOM05D007132 ORTHO05D009120 8.1e-104 380.9 285 61.1
SalBow8G0736 Salvia bowleyana HOM05D007132 ORTHO05D009120 1.2e-102 377.1 278 60.1
MSTRG.1761 Avicennia marina HOM05D007132 ORTHO05D009120 1.3e-101 373.6 278 62.2
Carub.0005s1173 Capsella rubella HOM05D007132 ORTHO05D009120 1.7e-101 373.2 282 60.3
CAN.G1026.1 Capsicum annuum HOM05D007132 ORTHO05D009120 3.8e-101 372.1 278 60.4
HanXRQChr12g0382251 Helianthus annuus HOM05D007132 ORTHO05D009120 1.4e-100 370.2 278 61.2
AL5G24560 Arabidopsis lyrata HOM05D007132 ORTHO05D009120 1.9e-100 369.8 277 61.7
ATR0568G089 Amborella trichopoda HOM05D007132 ORTHO05D009120 9.3e-100 367.5 287 58.9
AT3G45880 Arabidopsis thaliana HOM05D007132 ORTHO05D009120 2.1e-99 366.3 277 61.7
SGA_v2.0_scaffold111G31350 Striga asiatica HOM05D007132 ORTHO05D009120 2.1e-99 366.3 318 54.7
AUR62023023 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.7e-99 365.9 277 61.7
AUR62043353 Chenopodium quinoa HOM05D007132 ORTHO05D009120 2.7e-99 365.9 277 61.7
Ah.10g035250 Amaranthus hybridus HOM05D001758 ORTHO05D005969 1.8e-95 353.2 280 60.0
Peaxi162Scf00053g00715 Petunia axillaris HOM05D007132 ORTHO05D009120 4.0e-95 352.1 284 58.1
Nitab4.5_0000898g0130 Nicotiana tabacum HOM05D007132 ORTHO05D009120 3.4e-94 349.0 270 61.9
THA.LOC104798521 Tarenaya hassleriana HOM05D007132 ORTHO05D009120 2.2e-93 346.3 283 56.2
PSO675G1526 Papaver somniferum HOM05D007132 ORTHO05D009120 1.4e-92 343.6 249 64.3
SEGI_38459 Sequoiadendron giganteum HOM05D007132 ORTHO05D009120 1.3e-90 337.0 279 56.3
Os09g0483600 Oryza sativa ssp. japonica HOM05D007132 ORTHO05D009120 2.5e-89 332.8 292 56.5
unitig_46.g18229 Utricularia gibba HOM05D007132 ORTHO05D009120 5.3e-87 325.1 284 54.9
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 1.2e-86 323.9 235 63.4
Zm00001eb316510 Zea mays HOM05D007132 ORTHO05D009120 7.6e-86 321.2 294 54.4
Pp3c2_13200 Physcomitrium patens HOM05D007132 ORTHO05D009120 3.3e-81 305.8 300 51.0
SMO367G0267 Selaginella moellendorffii HOM05D007132 ORTHO05D009120 5.5e-76 288.5 302 50.0
TAR629G3242 Trochodendron aralioides HOM05D007132 ORTHO05D009120 4.4e-65 252.3 185 67.0
AagrBONN_evm.TU.Sc2ySwM_344.2529 Anthoceros agrestis HOM05D007132 ORTHO05D009120 4.1e-63 245.7 278 47.8
Cc02_g31510 Coffea canephora HOM05D007132 ORTHO05D009120 4.5e-62 242.3 146 72.6
MD10G1196200 Malus domestica HOM05D007132 ORTHO05D009120 4.8e-56 222.2 114 86.8
Sp5g15660 Schrenkiella parvula HOM05D007132 ORTHO05D009120 1.8e-55 220.3 269 46.5
MCO03G301 Micromonas commoda HOM05D007132 ORTHO05D009120 7.8e-38 161.8 274 38.3
Cfa022513 Carpinus fangiana HOM05D007132 ORTHO05D009120 5.0e-37 159.1 270 35.9
Cre03.g175750 Chlamydomonas reinhardtii HOM05D007132 ORTHO05D009120 3.6e-27 126.3 247 32.4
PRCOL_00004459 Prasinoderma coloniale HOM05D007132 ORTHO05D009120 1.8e-26 124.0 248 34.3
TAR629G3340 Trochodendron aralioides HOM05D007132 ORTHO05D009120 5.2e-26 122.5 74 71.6
GSVIVG01036861001 Vitis vinifera HOM05D007132 ORTHO05D009120 4.4e-25 119.4 74 66.2
FAN13G1029 Fragaria x ananassa HOM05D007132 ORTHO05D009181 1.1e-20 104.8 186 39.2
Nitab4.5_0000480g0030 Nicotiana tabacum HOM05D007132 ORTHO05D009120 1.3e-16 91.3 77 57.1
Migut.E01364 Erythranthe guttata HOM05D007132 ORTHO05D009120 2.2e-16 90.5 59 61.0
FAN02G3822 Fragaria x ananassa HOM05D007132 ORTHO05D009120 7.1e-15 85.5 93 50.5
CDE11G0272 Ceratophyllum demersum HOM05D000435 ORTHO05D000430 1.6e-14 84.3 105 42.9
Cre16.g694201 Chlamydomonas reinhardtii HOM05D009332 ORTHO05D044261 1.1e-07 61.6 203 27.6
Rhsim11G0036300 Rhododendron simsii HOM05D000007 ORTHO05D000039 4.6e-06 56.2 32 62.5


User provided reference genes

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