Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.2e-56 223.4 151 100.0
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.3e-39 166.8 149 69.1
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 2.0e-32 142.9 114 70.2
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 1.7e-31 139.8 114 69.3
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.0e-27 126.3 97 71.1
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.0e-27 126.3 102 70.6
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.6e-27 125.9 101 69.3
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 7.4e-27 124.4 102 69.6
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 7.4e-27 124.4 110 64.5
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.7e-26 123.2 111 62.2
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 4.8e-26 121.7 110 64.5
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 6.3e-26 121.3 111 61.3
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.4e-25 120.2 111 61.3
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 3.1e-25 119.0 142 52.8
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 3.1e-25 119.0 94 69.1
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 3.1e-25 119.0 95 67.4
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 5.3e-25 118.2 94 68.1
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.2e-24 117.1 95 65.3
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 1.2e-24 117.1 95 65.3
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.5e-24 116.7 92 69.6
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 2.0e-24 116.3 138 52.9
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 2.6e-24 115.9 94 64.9
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 4.5e-24 115.2 95 65.3
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 4.5e-24 115.2 125 56.0
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 4.5e-24 115.2 92 68.5
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 5.9e-24 114.8 112 57.1
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 5.9e-24 114.8 91 68.1
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 7.7e-24 114.4 113 59.3
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 7.7e-24 114.4 135 52.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 7.7e-24 114.4 110 61.8
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 7.7e-24 114.4 110 61.8
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 1.7e-23 113.2 95 62.1
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.7e-23 113.2 94 63.8
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 1.7e-23 113.2 95 64.2
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.7e-23 113.2 95 65.3
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.7e-23 113.2 94 67.0
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.7e-23 113.2 111 58.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 2.9e-23 112.5 94 62.8
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.9e-23 112.5 92 67.4
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.9e-23 112.5 109 56.0
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 3.8e-23 112.1 121 56.2
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 8.5e-23 110.9 90 66.7
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.4e-22 110.2 95 61.1
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 2.5e-22 109.4 121 56.2
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.2e-22 109.0 111 53.2
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 3.2e-22 109.0 95 62.1
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 4.2e-22 108.6 97 61.9
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 4.2e-22 108.6 95 60.0
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 4.2e-22 108.6 95 60.0
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 7.2e-22 107.8 102 57.8
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 7.2e-22 107.8 94 61.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 7.2e-22 107.8 95 60.0
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 9.4e-22 107.5 95 58.9
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.2e-21 107.1 89 73.0
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.6e-21 106.7 94 58.5
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.7e-21 105.9 93 62.4
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.7e-21 105.1 105 57.1
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 4.7e-21 105.1 87 65.5
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 6.1e-21 104.8 91 62.6
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 6.1e-21 104.8 94 60.6
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 7.9e-21 104.4 91 62.6
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 7.9e-21 104.4 91 59.3
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 1.0e-20 104.0 91 59.3
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.0e-20 104.0 92 57.6
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 1.4e-20 103.6 93 60.2
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.4e-20 103.6 97 55.7
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.3e-20 102.8 90 64.4
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 3.9e-20 102.1 95 58.9
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 3.9e-20 102.1 91 60.4
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 5.2e-20 101.7 90 63.3
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 6.7e-20 101.3 93 59.1
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 6.7e-20 101.3 93 58.1
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 6.7e-20 101.3 91 58.2
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 8.8e-20 100.9 95 54.7
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 8.8e-20 100.9 91 59.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.5e-19 100.1 128 46.1
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.5e-19 100.1 117 49.6
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 1.5e-19 100.1 92 59.8
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.0e-19 99.8 89 57.3
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 2.6e-19 99.4 89 60.7
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 2.6e-19 99.4 89 60.7
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.6e-19 99.4 130 52.3
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.6e-19 99.4 84 60.7
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 7.4e-19 97.8 89 59.6
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 7.4e-19 97.8 113 50.4
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 7.4e-19 97.8 89 59.6
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 7.4e-19 97.8 89 59.6
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 7.4e-19 97.8 106 51.9
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.7e-18 96.7 83 65.1
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.7e-18 96.7 89 59.6
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 2.8e-18 95.9 95 51.6
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 4.8e-18 95.1 89 59.6
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 8.2e-18 94.4 95 52.6
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.1e-17 94.0 93 54.8
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.4e-17 93.6 123 46.3
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.5e-16 89.0 78 60.3
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 4.5e-16 88.6 90 55.6
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.2e-15 86.3 49 87.8
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.9e-14 83.2 127 40.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.9e-14 83.2 74 62.2
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 2.5e-14 82.8 65 69.2
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.0e-12 77.4 90 51.1
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 3.3e-11 72.4 89 43.8
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 3.3e-11 72.4 89 44.9
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 3.3e-11 72.4 98 38.8
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 4.4e-11 72.0 97 41.2
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-09 67.4 89 37.1
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.8e-09 66.6 89 41.6
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.4e-09 66.2 67 52.2
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 3.1e-09 65.9 61 55.7
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 4.2e-06 55.5 83 38.6


User provided reference genes

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