Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 4.6e-56 221.1 120 100.0
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 1.4e-44 183.0 120 85.0
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 2.4e-36 155.6 122 72.1
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 9.7e-30 133.7 116 68.1
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 8.2e-29 130.6 122 68.0
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 9.1e-28 127.1 122 66.4
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.2e-27 126.7 122 66.4
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 1.6e-27 126.3 124 64.5
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 2.0e-27 125.9 124 66.1
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 2.0e-27 125.9 122 66.4
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 2.0e-27 125.9 122 66.4
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 2.0e-27 125.9 121 64.5
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 2.6e-27 125.6 113 65.5
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 4.5e-27 124.8 122 64.8
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 1.7e-26 122.9 120 68.3
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 6.5e-26 120.9 120 60.8
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 1.9e-25 119.4 122 63.1
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 2.5e-25 119.0 124 61.3
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 7.2e-25 117.5 120 63.3
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 2.1e-24 115.9 121 62.8
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 2.1e-24 115.9 120 61.7
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 3.6e-24 115.2 124 61.3
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 4.7e-24 114.8 128 57.0
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 1.4e-23 113.2 120 60.8
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 2.3e-23 112.5 123 61.0
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 2.3e-23 112.5 121 64.5
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 3.0e-23 112.1 122 59.8
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 3.0e-23 112.1 105 64.8
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 4.0e-23 111.7 120 60.0
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 5.2e-23 111.3 121 62.8
Cc09_g04790 Coffea canephora HOM05D006797 ORTHO05D007696 8.8e-23 110.5 118 61.9
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 1.2e-22 110.2 118 59.3
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 1.5e-22 109.8 123 56.9
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 2.0e-22 109.4 120 60.8
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 2.0e-22 109.4 120 60.8
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 2.0e-22 109.4 123 58.5
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 2.6e-22 109.0 123 59.3
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 2.6e-22 109.0 121 59.5
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 3.3e-22 108.6 128 57.8
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 4.4e-22 108.2 121 58.7
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 4.4e-22 108.2 121 56.2
HanXRQChr12g0377351 Helianthus annuus HOM05D006797 ORTHO05D007696 4.4e-22 108.2 120 57.5
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 4.4e-22 108.2 118 56.8
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 2.2e-21 105.9 121 59.5
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 8.3e-21 104.0 127 55.9
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 1.8e-20 102.8 122 55.7
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 3.5e-19 98.6 127 58.3
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 3.5e-19 98.6 126 51.6
COL.COLO4_25039 Corchorus olitorius HOM05D006797 ORTHO05D007696 7.7e-19 97.4 100 62.0
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 7.7e-19 97.4 120 55.8
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 1.0e-18 97.1 126 53.2
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 2.9e-18 95.5 126 53.2
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 3.8e-18 95.1 122 51.6
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 6.5e-18 94.4 104 59.6
CAN.G809.30 Capsicum annuum HOM05D006797 ORTHO05D007696 8.5e-18 94.0 122 54.9
Lsat_1_v5_gn_3_103300 Lactuca sativa HOM05D006797 ORTHO05D007696 8.5e-18 94.0 109 54.1
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 1.5e-17 93.2 126 52.4
THA.LOC104812696 Tarenaya hassleriana HOM05D006797 ORTHO05D007696 1.5e-17 93.2 130 54.6
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 2.5e-17 92.4 113 52.2
ECA248G3234 Erigeron canadensis HOM05D006797 ORTHO05D007696 2.5e-17 92.4 120 50.8
PSO675G1942 Papaver somniferum HOM05D006797 ORTHO05D007696 3.2e-17 92.0 120 52.5
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 7.2e-17 90.9 124 51.6
PSO541G4265 Papaver somniferum HOM05D006797 ORTHO05D007696 9.4e-17 90.5 120 51.7
Nitab4.5_0003902g0030 Nicotiana tabacum HOM05D006797 ORTHO05D007696 1.2e-16 90.1 122 52.5
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 1.6e-16 89.7 120 50.0
Nn1g05854 Nelumbo nucifera HOM05D006797 ORTHO05D007696 1.6e-16 89.7 115 51.3
Nitab4.5_0000632g0020 Nicotiana tabacum HOM05D006797 ORTHO05D007696 1.6e-16 89.7 122 52.5
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 1.6e-16 89.7 120 51.7
Solyc02g082020.3 Solanum lycopersicum HOM05D006797 ORTHO05D007696 1.6e-16 89.7 122 53.3
Potri.003G155400 Populus trichocarpa HOM05D006797 ORTHO05D007696 4.7e-16 88.2 126 48.4
Sopen02g026660 Solanum pennellii HOM05D006797 ORTHO05D007696 1.0e-15 87.0 122 51.6
Peaxi162Scf00036g02019 Petunia axillaris HOM05D006797 ORTHO05D007696 1.8e-15 86.3 122 53.3
Aa31LG6G12300 Aethionema arabicum HOM05D006797 ORTHO05D007696 3.0e-15 85.5 118 55.1
PGSC0003DMG400007337 Solanum tuberosum HOM05D006797 ORTHO05D007696 3.0e-15 85.5 122 50.8
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 4.0e-15 85.1 130 47.7
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 6.8e-15 84.3 116 51.7
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 8.8e-15 84.0 128 48.4
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 8.8e-15 84.0 97 56.7
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 1.2e-14 83.6 105 54.3
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 1.2e-14 83.6 86 64.0
A07p09570 Brassica napus HOM05D006797 ORTHO05D007696 3.4e-14 82.0 113 53.1
BraA07t28751Z Brassica rapa HOM05D006797 ORTHO05D007696 3.4e-14 82.0 113 53.1
A09p35270 Brassica napus HOM05D006797 ORTHO05D007696 5.7e-14 81.3 114 52.6
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 7.5e-14 80.9 116 51.7
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 1.7e-13 79.7 130 47.7
BcaB04g18200 Brassica carinata HOM05D006797 ORTHO05D007696 2.2e-13 79.3 120 53.3
BcaB07g32754 Brassica carinata HOM05D006797 ORTHO05D007696 2.8e-13 79.0 117 52.1
BolC7t41975H Brassica oleracea HOM05D006797 ORTHO05D007696 2.8e-13 79.0 118 54.2
Carub.0001s2922 Capsella rubella HOM05D006797 ORTHO05D007696 3.7e-13 78.6 122 52.5
Sp1g26780 Schrenkiella parvula HOM05D006797 ORTHO05D007696 3.7e-13 78.6 117 53.0
AL1G45170 Arabidopsis lyrata HOM05D006797 ORTHO05D007696 4.8e-13 78.2 125 51.2
BcaC07g37796 Brassica carinata HOM05D006797 ORTHO05D007696 6.3e-13 77.8 114 50.9
A08p10910 Brassica napus HOM05D006797 ORTHO05D007696 6.3e-13 77.8 114 50.9
C07p14730 Brassica napus HOM05D006797 ORTHO05D007696 6.3e-13 77.8 118 53.4
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 6.3e-13 77.8 49 87.8
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 6.3e-13 77.8 68 67.6
Os04g0611300 Oryza sativa ssp. japonica HOM05D006797 ORTHO05D007696 8.3e-13 77.4 121 48.8
BraA09t39054Z Brassica rapa HOM05D006797 ORTHO05D007696 1.1e-12 77.0 117 50.4
BcaC05g27127 Brassica carinata HOM05D006797 ORTHO05D007696 1.4e-12 76.6 117 50.4
C05p30120 Brassica napus HOM05D006797 ORTHO05D007696 1.4e-12 76.6 117 50.4
BraA08t33088Z Brassica rapa HOM05D006797 ORTHO05D007696 1.8e-12 76.3 117 52.1
Thhalv10009126m.g Eutrema salsugineum HOM05D006797 ORTHO05D007696 1.8e-12 76.3 118 52.5
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 1.8e-12 76.3 100 50.0
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 2.4e-12 75.9 71 67.6
BolC5t31749H Brassica oleracea HOM05D006797 ORTHO05D007696 4.1e-12 75.1 122 46.7
BolC8t48187H Brassica oleracea HOM05D006797 ORTHO05D007696 4.1e-12 75.1 115 48.7
CARHR030370 Cardamine hirsuta HOM05D006797 ORTHO05D007696 1.2e-11 73.6 125 48.8
Sabra03G0112800 Salix brachista HOM05D006797 ORTHO05D007696 1.6e-11 73.2 56 73.2
AT1G30880 Arabidopsis thaliana HOM05D006797 ORTHO05D007696 2.7e-11 72.4 124 50.0
DCAR_001265 Daucus carota HOM05D006797 ORTHO05D007696 4.5e-11 71.6 98 53.1
Cfa002056 Carpinus fangiana HOM05D006797 ORTHO05D007696 7.7e-11 70.9 159 37.7
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 2.3e-10 69.3 69 63.8
Hma1.2p1_0747F.1_g212490 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 2.8e-08 62.4 80 56.2
Oeu008734.1 Olea europaea HOM05D016541 ORTHO05D007696 8.0e-08 60.8 73 56.2
Cfa001151 Carpinus fangiana HOM05D000071 ORTHO05D000029 1.8e-07 59.7 164 32.9
Pp3c24_14860 Physcomitrium patens HOM05D006797 ORTHO05D007696 4.0e-07 58.5 115 42.6
C04p29800 Brassica napus HOM05D006797 ORTHO05D007696 8.9e-07 57.4 83 53.0
BolC9t58594H Brassica oleracea HOM05D006797 ORTHO05D007696 8.9e-07 57.4 72 58.3
BcaC02g10358 Brassica carinata HOM05D006797 ORTHO05D007696 1.2e-06 57.0 72 58.3
Mapoly0051s0054 Marchantia polymorpha HOM05D006797 ORTHO05D007696 1.2e-06 57.0 111 43.2


User provided reference genes

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