Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G118900 Prunus persica HOM05D003521 ORTHO05D000476 1.2e-110 403.3 217 100.0
Prupe.5G245900 Prunus persica HOM05D003521 ORTHO05D000476 3.6e-99 365.2 201 98.5
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 1.9e-84 316.2 179 96.6
Prupe.2G059800 Prunus persica HOM05D003521 ORTHO05D000476 4.8e-43 178.7 99 98.0
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 7.6e-41 171.4 179 62.6
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 7.1e-39 164.9 179 60.9
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 1.1e-31 141.0 218 49.5
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.1e-26 124.4 219 45.7
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 2.6e-25 119.8 231 43.3
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.0e-24 117.9 231 43.3
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 7.2e-23 111.7 229 41.9
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.3e-21 107.5 173 44.5
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 3.9e-21 105.9 174 41.4
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 6.7e-21 105.1 175 43.4
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 9.1e-18 94.7 186 42.5
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.2e-17 94.4 201 36.8
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 1.5e-17 94.0 177 36.7
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 1.9e-15 87.0 190 40.0
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 4.2e-15 85.9 178 37.1
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 7.2e-15 85.1 179 37.4
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.2e-14 84.3 181 39.8
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.2e-14 84.3 179 38.5
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 1.4e-13 80.9 177 34.5
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 3.0e-13 79.7 185 34.1
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.1e-12 77.8 174 32.8
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 5.7e-12 75.5 177 33.9
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 1.1e-10 71.2 177 36.2
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.4e-10 70.1 187 30.5
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 3.1e-10 69.7 178 34.3
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.4e-09 66.2 177 37.3
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.0e-08 64.7 177 35.6
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.3e-08 64.3 191 32.5
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 1.3e-08 64.3 161 36.6
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 2.9e-08 63.2 210 29.5
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 5.0e-08 62.4 192 32.8
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 6.5e-08 62.0 164 32.3
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 8.5e-08 61.6 201 30.3
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 8.5e-08 61.6 181 32.6
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 1.6e-06 57.4 174 31.6
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 4.7e-06 55.8 163 33.7
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 4.7e-06 55.8 181 28.7
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 6.1e-06 55.5 173 31.8
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 7.9e-06 55.1 176 36.4


User provided reference genes

Program Settings