Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G118800 Prunus persica HOM05D007155 ORTHO05D003034 1.4e-78 297.7 418 100.0
MD10G1226600 Malus domestica HOM05D007155 ORTHO05D003034 5.4e-43 179.5 119 74.8
VMungo1309G1642 Vigna mungo HOM05D007155 ORTHO05D003034 1.1e-40 171.8 115 69.6
FAN21G1032 Fragaria x ananassa HOM05D007155 ORTHO05D003034 3.1e-38 163.7 120 68.3
Lj6g0001159 Lotus japonicus HOM05D007155 ORTHO05D003034 3.1e-38 163.7 115 67.0
Ca_01983_v3 Cicer arietinum L. HOM05D007155 ORTHO05D003034 4.4e-37 159.8 119 65.5
FAN11G2573 Fragaria x ananassa HOM05D007155 ORTHO05D003034 1.2e-34 151.8 119 64.7
CiPaw.09G138700 Carya illinoinensis HOM05D007155 ORTHO05D003034 2.7e-34 150.6 122 60.7
FvH4_3g13070 Fragaria vesca HOM05D007155 ORTHO05D003034 6.0e-34 149.4 119 63.9
FAN25G3588 Fragaria x ananassa HOM05D007155 ORTHO05D003034 6.0e-34 149.4 118 63.6
Gohir.A05G245700 Gossypium hirsutum HOM05D007155 ORTHO05D003034 7.8e-34 149.1 121 61.2
FAN16G0835 Fragaria x ananassa HOM05D007155 ORTHO05D003034 1.5e-32 144.8 120 62.5
Psat1g150440 Pisum sativum HOM05D007155 ORTHO05D003034 1.9e-32 144.4 115 60.9
RcHm_v2.0_Chr5g0021261 Rosa chinensis HOM05D007155 ORTHO05D003034 5.6e-32 142.9 114 64.9
TPR.G29692 Trifolium pratense HOM05D007155 ORTHO05D003034 5.6e-32 142.9 115 60.0
GSVIVG01012156001 Vitis vinifera HOM05D007155 ORTHO05D003034 9.5e-32 142.1 121 57.9
QL10p022098 Quercus lobata HOM05D007155 ORTHO05D003034 2.8e-31 140.6 81 81.5
CsaV3_2G014420 Cucumis sativus L. HOM05D007155 ORTHO05D003034 3.6e-31 140.2 123 55.3
Thecc.02G002900 Theobroma cacao HOM05D007155 ORTHO05D003034 3.6e-31 140.2 122 57.4
Cfa001139 Carpinus fangiana HOM05D007155 ORTHO05D003034 6.2e-31 139.4 120 57.5
Haze_05252 Corylus avellana HOM05D007155 ORTHO05D003034 6.2e-31 139.4 120 57.5
TAR624G1337 Trochodendron aralioides HOM05D007155 ORTHO05D003034 6.2e-31 139.4 121 59.5
Dinv26303 Davidia involucrata HOM05D007155 ORTHO05D003034 1.1e-30 138.7 81 79.0
Potri.003G154800 Populus trichocarpa HOM05D007155 ORTHO05D003034 1.4e-30 138.3 117 59.8
EL10Ac7g17660 Beta vulgaris HOM05D007155 ORTHO05D003034 1.8e-30 137.9 113 56.6
Carub.0007s2104 Capsella rubella HOM05D007155 ORTHO05D003034 8.9e-30 135.6 119 53.8
Gorai.009G258000 Gossypium raimondii HOM05D007155 ORTHO05D003034 8.9e-30 135.6 116 58.6
Phvul.009G243700 Phaseolus vulgaris HOM05D007155 ORTHO05D003034 1.5e-29 134.8 116 56.0
Gohir.D05G247200 Gossypium hirsutum HOM05D007155 ORTHO05D003034 2.6e-29 134.0 116 57.8
CANSAT35G0897 Cannabis sativa HOM05D007155 ORTHO05D003034 5.8e-29 132.9 123 52.0
Duzib132G0118 Durio zibethinus HOM05D007155 ORTHO05D003034 5.8e-29 132.9 80 76.2
Sabra03G0112000 Salix brachista HOM05D007155 ORTHO05D003034 5.8e-29 132.9 117 57.3
CARHR226930 Cardamine hirsuta HOM05D007155 ORTHO05D003034 9.9e-29 132.1 124 51.6
ClCG01G025760 Citrullus lanatus HOM05D007155 ORTHO05D003034 9.9e-29 132.1 123 54.5
CANSAT21G2211 Cannabis sativa HOM05D007155 ORTHO05D003034 2.2e-28 131.0 123 52.0
Sed0006212 Sechium edule HOM05D007155 ORTHO05D003034 2.2e-28 131.0 109 60.6
Lj2P342T43 Lonicera japonica HOM05D007155 ORTHO05D003034 2.9e-28 130.6 81 72.8
Nn1g07043 Nelumbo nucifera HOM05D007155 ORTHO05D003034 4.9e-28 129.8 121 54.5
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 4.9e-28 129.8 121 53.7
Medtr2g035450 Medicago truncatula HOM05D007155 ORTHO05D003034 6.4e-28 129.4 114 55.3
Atru.chr10.291 Acer truncatum HOM05D007155 ORTHO05D003034 8.3e-28 129.0 82 75.6
DCAR_001266 Daucus carota HOM05D007155 ORTHO05D003034 8.3e-28 129.0 82 73.2
Manes.09G079638 Manihot esculenta HOM05D007155 ORTHO05D003034 8.3e-28 129.0 81 74.1
PSO832G3824 Papaver somniferum HOM05D007155 ORTHO05D003034 8.3e-28 129.0 121 52.9
AL7G33760 Arabidopsis lyrata HOM05D007155 ORTHO05D003034 2.4e-27 127.5 121 52.9
Ciclev10014519m.g Citrus clementina HOM05D007155 ORTHO05D003034 2.4e-27 127.5 118 53.4
Sc17g0004280 Simmondsia chinensis HOM05D007155 ORTHO05D003034 2.4e-27 127.5 122 54.1
Manes.13G075956 Manihot esculenta HOM05D007155 ORTHO05D003034 3.2e-27 127.1 121 53.7
Sp7g18540 Schrenkiella parvula HOM05D007155 ORTHO05D003034 3.2e-27 127.1 120 53.3
Thhalv10010168m.g Eutrema salsugineum HOM05D007155 ORTHO05D003034 4.1e-27 126.7 121 52.9
Lalb_Chr15g0083741 Lupinus albus HOM05D007155 ORTHO05D003034 4.1e-27 126.7 116 52.6
Potri.001G075900 Populus trichocarpa HOM05D007155 ORTHO05D003034 5.4e-27 126.3 75 80.0
BraA01t01129Z Brassica rapa HOM05D007155 ORTHO05D003034 7.1e-27 125.9 156 55.8
Eucgr.D00014 Eucalyptus grandis HOM05D007155 ORTHO05D003034 7.1e-27 125.9 115 53.0
CSS0001449 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 9.2e-27 125.6 81 72.8
CSS0034942 Camellia sinensis var. sinensis HOM05D007155 ORTHO05D003034 9.2e-27 125.6 81 72.8
SGA_v2.0_scaffold341G49370 Striga asiatica HOM05D007155 ORTHO05D002534 9.2e-27 125.6 151 55.0
THA.LOC104811820 Tarenaya hassleriana HOM05D007155 ORTHO05D003034 1.2e-26 125.2 123 49.6
MSTRG.22516 Avicennia marina HOM05D007155 ORTHO05D003034 2.1e-26 124.4 81 69.1
A01p11870 Brassica napus HOM05D007155 ORTHO05D003034 2.1e-26 124.4 156 55.8
Lalb_Chr02g0154101 Lupinus albus HOM05D007155 ORTHO05D003034 2.1e-26 124.4 123 49.6
Oeu046920.2 Olea europaea HOM05D007155 ORTHO05D003034 2.1e-26 124.4 123 48.8
C01p14070 Brassica napus HOM05D007155 ORTHO05D003034 3.5e-26 123.6 155 54.8
BolC1t01374H Brassica oleracea HOM05D007155 ORTHO05D003034 4.6e-26 123.2 155 54.8
Glyma.09G050500 Glycine max HOM05D007155 ORTHO05D003034 6.0e-26 122.9 77 71.4
Aa31LG6G2510 Aethionema arabicum HOM05D007155 ORTHO05D003034 7.8e-26 122.5 120 54.2
PGR142G0445 Punica granatum HOM05D007155 ORTHO05D003034 5.1e-25 119.8 80 67.5
Aqoxy1G03675 Aquilegia oxysepala HOM05D007155 ORTHO05D003034 1.5e-24 118.2 119 48.7
SalBow7G4478 Salvia bowleyana HOM05D007155 ORTHO05D003034 1.5e-24 118.2 79 69.6
Sed0017393 Sechium edule HOM05D007155 ORTHO05D003034 4.3e-24 116.7 123 48.0
AT4G20090 Arabidopsis thaliana HOM05D007155 ORTHO05D003034 5.6e-24 116.3 121 49.6
Rhsim10G0011200 Rhododendron simsii HOM05D007155 ORTHO05D003034 9.5e-24 115.5 78 70.5
BcaNung06194 Brassica carinata HOM05D007155 ORTHO05D003034 2.1e-23 114.4 121 49.6
Actinidia34693 Actinidia chinensis HOM05D007155 ORTHO05D003034 2.8e-23 114.0 82 67.1
CAN.G809.50 Capsicum annuum HOM05D007155 ORTHO05D003034 6.2e-23 112.8 188 43.1
Cc09_g05030 Coffea canephora HOM05D007155 ORTHO05D003034 6.2e-23 112.8 81 61.7
vmacro11017 Vaccinium macrocarpon HOM05D007155 ORTHO05D003034 4.0e-22 110.2 77 66.2
Nitab4.5_0010610g0010 Nicotiana tabacum HOM05D007155 ORTHO05D003034 1.2e-21 108.6 78 60.3
SHI28075 Sapria himalayana HOM05D007155 ORTHO05D003034 1.2e-21 108.6 123 43.9
Lsat_1_v5_gn_5_153261 Lactuca sativa HOM05D007155 ORTHO05D003034 1.5e-21 108.2 123 42.3
Hund12398 Selenicereus undatus HOM05D007155 ORTHO05D003034 1.5e-21 108.2 80 61.2
ECA233G0666 Erigeron canadensis HOM05D007155 ORTHO05D003034 2.6e-21 107.5 82 61.0
Ah.15g092760 Amaranthus hybridus HOM05D007155 ORTHO05D003034 5.8e-21 106.3 76 65.8
HanXRQChr01g0005921 Helianthus annuus HOM05D007155 ORTHO05D003034 7.6e-21 105.9 81 61.7
Solyc02g081860.3 Solanum lycopersicum HOM05D007155 ORTHO05D003034 1.7e-20 104.8 74 59.5
PGSC0003DMG400007329 Solanum tuberosum HOM05D007155 ORTHO05D003034 2.2e-20 104.4 121 41.3
Peaxi162Scf00036g00084 Petunia axillaris HOM05D007155 ORTHO05D003034 6.4e-20 102.8 75 61.3
Sopen02g026480 Solanum pennellii HOM05D007155 ORTHO05D003034 1.4e-19 101.7 74 58.1
Nitab4.5_0000844g0300 Nicotiana tabacum HOM05D007155 ORTHO05D003034 1.9e-19 101.3 75 60.0
Os06g0499301 Oryza sativa ssp. japonica HOM05D007155 ORTHO05D003034 5.4e-19 99.8 121 44.6
MELO3C021947.2 Cucumis melo HOM05D007155 ORTHO05D003034 8.7e-17 92.4 81 55.6
Migut.L00974 Erythranthe guttata HOM05D007155 ORTHO05D003034 1.5e-16 91.7 66 68.2
Zm00001eb064820 Zea mays HOM05D007155 ORTHO05D003034 1.5e-16 91.7 111 41.4
HPP92_011144 Vanilla planifolia HOM05D007155 ORTHO05D003034 3.3e-16 90.5 111 41.4
Migut.L00267 Erythranthe guttata HOM05D007155 ORTHO05D003034 5.6e-16 89.7 66 66.7
Lalb_Chr15g0083701 Lupinus albus HOM05D007155 ORTHO05D003034 1.4e-11 75.1 80 46.2
MBI02_g21862_MAGBIO Magnolia biondii HOM05D007155 ORTHO05D003034 1.0e-09 68.9 49 65.3
Zm00001eb023980 Zea mays HOM05D007155 ORTHO05D003034 6.2e-07 59.7 51 49.0
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 3.1e-06 57.4 126 30.2
Carub.0008s0042 Capsella rubella HOM05D006400 ORTHO05D008039 4.0e-06 57.0 120 28.3
AL8G10680 Arabidopsis lyrata HOM05D006400 ORTHO05D008039 9.0e-06 55.8 120 28.3


User provided reference genes

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