Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G113600 Prunus persica HOM05D000876 ORTHO05D000285 2.0e-74 282.3 145 100.0
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 2.1e-63 245.7 145 89.0
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 1.1e-62 243.4 145 88.3
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 1.2e-26 123.6 150 48.0
MD06G1090800 Malus domestica HOM05D000876 ORTHO05D000285 1.9e-24 116.3 102 56.9
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 1.3e-23 113.6 147 43.5
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 4.2e-19 98.6 139 43.9
RcHm_v2.0_Chr2g0103961 Rosa chinensis HOM05D000876 ORTHO05D000285 7.9e-18 94.4 146 41.8
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.9e-17 92.0 135 42.2
FAN02G2707 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.7e-17 91.3 138 47.1
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.7e-17 90.9 138 46.4
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.7e-17 90.9 136 47.8
FAN17G0428 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.7e-17 90.9 136 47.8
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 1.5e-16 90.1 138 46.4
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 1.5e-16 90.1 138 46.4
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.5e-16 90.1 138 42.0
FAN07G1275 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.5e-16 90.1 138 46.4
RcHm_v2.0_Chr2g0128681 Rosa chinensis HOM05D000876 ORTHO05D000285 1.9e-16 89.7 142 42.3
FAN02G3048 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.3e-16 89.0 138 46.4
RcHm_v2.0_Chr6g0254701 Rosa chinensis HOM05D000876 ORTHO05D000285 4.3e-16 88.6 143 39.9
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.7e-16 88.2 135 41.5
FvH4_7g00070 Fragaria vesca HOM05D000876 ORTHO05D000285 7.4e-16 87.8 138 42.8
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 7.4e-16 87.8 138 45.7
FAN23G0201 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-15 87.0 137 43.1
FAN23G2351 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-15 87.0 137 43.1
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-15 85.9 138 44.9
Atru.chr5.1610 Acer truncatum HOM05D000034 ORTHO05D000037 6.3e-15 84.7 128 44.5
FvH4_3g21471 Fragaria vesca HOM05D000034 ORTHO05D000285 1.1e-14 84.0 125 42.4
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-14 84.0 138 44.2
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-14 84.0 130 42.3
FAN06G3321 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.1e-14 82.4 131 42.7
RcHm_v2.0_Chr7g0199281 Rosa chinensis HOM05D000876 ORTHO05D000285 3.1e-14 82.4 123 43.9
FAN25G1382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.1e-14 82.0 123 43.1
arahy.Tifrunner.gnm1.ann1.T11VTH Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-13 80.1 135 37.0
FAN08G0806 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.0e-13 79.7 123 43.1
FvH4_6g53022 Fragaria vesca HOM05D000876 ORTHO05D000285 2.6e-13 79.3 136 41.9
FAN02G2262 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-13 79.3 136 41.9
FAN10G2724 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-13 79.3 87 54.0
RcHm_v2.0_Chr5g0029731 Rosa chinensis HOM05D000876 ORTHO05D000285 3.4e-13 79.0 91 50.5
FvH4_2g31320 Fragaria vesca HOM05D000876 ORTHO05D022651 4.5e-13 78.6 129 45.7
FAN09G3353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.7e-13 77.8 143 41.3
FAN11G2465 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.7e-13 77.8 142 37.3
FAN22G0382 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-12 77.4 125 44.0
FvH4_1g28413 Fragaria vesca HOM05D000876 ORTHO05D015047 6.5e-12 74.7 136 41.9
FAN21G2190 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-11 73.9 127 42.5
Prupe.1G173000 Prunus persica HOM05D000876 ORTHO05D000285 1.4e-11 73.6 115 47.8
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 1.9e-11 73.2 136 41.2
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.2e-11 72.0 138 35.5
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 5.5e-11 71.6 134 33.6
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 7.2e-11 71.2 150 34.0
Atru.chr10.824 Acer truncatum HOM05D000876 ORTHO05D000285 9.4e-11 70.9 150 33.3
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 1.2e-10 70.5 136 34.6
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 1.2e-10 70.5 136 35.3
FAN21G1280 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-10 70.1 143 35.7
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-10 69.7 136 36.0
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-10 69.7 136 36.0
FAN05G3579 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-10 69.7 131 38.2
FAN19G2459 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.1e-10 69.7 138 37.7
FAN10G2634 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.7e-10 69.3 72 56.9
FAN09G1076 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.6e-10 68.9 125 40.8
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 4.6e-10 68.6 136 35.3
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 7.9e-10 67.8 136 35.3
FAN05G4445 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.4e-09 67.0 118 41.5
FAN05G3178 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.3e-09 66.2 133 36.1
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 6.7e-09 64.7 136 34.6
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-08 63.9 138 35.5
FAN10G0055 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-08 63.9 72 54.2
PSO507G0009 Papaver somniferum HOM05D000876 ORTHO05D000285 1.1e-08 63.9 134 30.6
FAN10G3635 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.0e-08 63.2 65 53.8
FAN12G2878 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.0e-08 63.2 138 37.0
FAN14G3310 Fragaria x ananassa HOM05D000876 ORTHO05D046130 2.0e-08 63.2 69 47.8
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.7e-08 61.6 144 31.2
Atru.chr5.3371 Acer truncatum HOM05D000876 ORTHO05D000285 9.7e-08 60.8 137 33.6
FAN21G2068 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.7e-08 60.8 85 41.2
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 1.3e-07 60.5 137 33.6
Potri.010G076000 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.2e-07 59.7 151 31.8
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 6.3e-07 58.2 149 28.9
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 6.3e-07 58.2 149 28.9
CANSAT01G0041 Cannabis sativa HOM05D000876 ORTHO05D000285 6.3e-07 58.2 130 33.1
CANSAT54G1231 Cannabis sativa HOM05D000876 ORTHO05D000285 6.3e-07 58.2 130 32.3
FAN09G0603 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.3e-07 58.2 86 44.2
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-06 57.4 139 32.4
Hma1.2p1_0148F.1_g066070 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 1.4e-06 57.0 96 33.3
Hma1.2p1_0148F.1_g066080 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 1.4e-06 57.0 96 33.3
MD05G1346000 Malus domestica HOM05D018741 ORTHO05D020857 1.8e-06 56.6 55 47.3
CANSAT35G0018 Cannabis sativa HOM05D000876 ORTHO05D000285 4.1e-06 55.5 133 30.8
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.1e-06 55.5 142 31.0
CANSAT64G0872 Cannabis sativa HOM05D000876 ORTHO05D000285 6.9e-06 54.7 130 30.8
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 9.1e-06 54.3 130 32.3
FAN02G4516 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.1e-06 54.3 78 44.9
Gorai.007G190400 Gossypium raimondii HOM05D000876 ORTHO05D000285 9.1e-06 54.3 100 32.0


User provided reference genes

Program Settings