Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.4e-98 362.1 174 100.0
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 6.4e-83 310.8 175 86.3
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 2.9e-75 285.4 172 81.4
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 4.6e-73 278.1 165 81.8
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 1.0e-72 276.9 172 79.1
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 1.0e-67 260.4 171 74.9
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 1.3e-64 250.0 150 77.3
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.8e-64 249.6 152 80.3
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 6.7e-64 247.7 169 72.8
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 8.7e-64 247.3 170 71.8
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 6.3e-62 241.1 153 74.5
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.1e-61 240.4 147 76.2
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.4e-61 240.0 158 75.9
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 6.9e-61 237.7 169 69.2
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.0e-59 233.8 174 64.9
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 1.3e-59 233.4 175 66.9
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.7e-59 233.0 168 69.0
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 2.2e-59 232.6 142 76.8
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 2.2e-59 232.6 170 68.8
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 3.8e-59 231.9 123 87.8
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.1e-58 230.3 137 78.1
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 1.1e-58 230.3 174 65.5
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 1.4e-58 229.9 174 65.5
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.9e-58 229.6 172 66.3
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 2.5e-58 229.2 211 58.8
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 3.2e-58 228.8 174 66.1
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 4.2e-58 228.4 171 63.2
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 7.2e-58 227.6 158 70.3
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 9.4e-58 227.3 142 74.6
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 6.1e-57 224.6 150 74.0
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 7.9e-57 224.2 129 80.6
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 7.9e-57 224.2 178 63.5
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 7.9e-57 224.2 170 64.1
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 1.0e-56 223.8 140 74.3
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 2.3e-56 222.6 168 67.3
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 2.3e-56 222.6 171 66.1
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 3.9e-56 221.9 148 70.9
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 5.1e-56 221.5 148 70.9
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 6.7e-56 221.1 148 70.3
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 1.1e-55 220.3 142 73.9
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 1.1e-55 220.3 175 61.7
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.1e-55 220.3 173 64.2
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.0e-55 219.5 170 64.7
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.0e-55 219.5 170 64.7
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 2.0e-55 219.5 156 70.5
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 4.4e-55 218.4 140 75.7
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 4.4e-55 218.4 173 63.0
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 5.7e-55 218.0 148 70.3
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 7.4e-55 217.6 179 63.1
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 7.4e-55 217.6 175 63.4
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.3e-54 216.9 148 69.6
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.7e-54 216.5 130 78.5
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.2e-54 216.1 130 78.5
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 2.8e-54 215.7 132 75.0
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 3.7e-54 215.3 142 72.5
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 3.7e-54 215.3 171 61.4
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 4.8e-54 214.9 164 62.8
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 6.3e-54 214.5 128 77.3
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 8.2e-54 214.2 148 69.6
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.4e-53 213.4 147 70.1
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 1.8e-53 213.0 135 76.3
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 3.1e-53 212.2 166 62.0
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 3.1e-53 212.2 166 62.0
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 5.3e-53 211.5 176 60.8
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 6.9e-53 211.1 167 65.3
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 6.9e-53 211.1 223 54.3
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.6e-52 209.1 169 64.5
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 7.7e-52 207.6 112 82.1
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 2.2e-51 206.1 138 72.5
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.2e-51 206.1 166 61.4
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 6.5e-51 204.5 196 56.6
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 4.2e-50 201.8 155 62.6
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 7.2e-50 201.1 153 65.4
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 7.2e-50 201.1 106 84.0
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 6.1e-49 198.0 129 72.9
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 3.0e-48 195.7 154 61.0
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 6.7e-48 194.5 147 62.6
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.1e-47 193.7 106 78.3
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 5.7e-47 191.4 171 61.4
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.7e-46 189.9 169 54.4
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 2.2e-46 189.5 132 67.4
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.8e-45 186.4 100 81.0
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 3.1e-45 185.7 161 59.6
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 3.1e-45 185.7 167 54.5
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 3.5e-44 182.2 127 68.5
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 1.0e-43 180.6 102 73.5
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 8.5e-43 177.6 110 68.2
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 6.7e-40 167.9 110 70.9
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 5.7e-39 164.9 117 65.8
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 9.7e-39 164.1 105 74.3
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 3.7e-38 162.2 92 72.8
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 1.5e-34 150.2 96 80.2
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 5.5e-34 148.3 115 55.7
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 2.1e-33 146.4 119 56.3
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 4.7e-33 145.2 118 55.1
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 6.1e-33 144.8 125 52.8
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 2.3e-32 142.9 146 53.4
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.7e-30 136.7 142 50.7
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 5.0e-27 125.2 125 48.0
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 2.5e-26 122.9 146 43.2
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 1.6e-25 120.2 133 46.6
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.3e-24 116.3 142 43.7
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 5.7e-23 111.7 58 82.8
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 5.7e-23 111.7 72 66.7
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.2e-20 104.0 85 61.2
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 3.3e-18 95.9 87 49.4


User provided reference genes

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