Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 2.5e-144 515.4 254 100.0
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 2.1e-122 442.6 254 85.4
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 4.8e-119 431.4 254 83.9
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 1.5e-112 409.8 255 79.6
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.4e-110 403.3 256 78.1
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 1.5e-109 399.8 256 77.0
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.0e-109 399.4 256 77.0
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 3.4e-109 398.7 256 77.0
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 3.4e-109 398.7 256 77.3
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 1.4e-97 360.1 251 70.9
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 1.5e-93 346.7 242 67.8
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 6.1e-90 334.7 233 70.4
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 1.8e-89 333.2 259 65.3
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 2.6e-88 329.3 247 65.2
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 1.3e-87 327.0 247 64.4
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 2.8e-87 325.9 253 64.0
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.6e-85 319.3 241 64.3
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 1.0e-84 317.4 252 63.5
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 1.0e-84 317.4 249 60.6
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 1.5e-83 313.5 224 67.0
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 1.5e-83 313.5 220 67.3
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 2.5e-83 312.8 249 60.6
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 3.2e-83 312.4 233 65.7
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 1.6e-82 310.1 249 60.2
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 2.1e-82 309.7 221 65.6
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 2.3e-81 306.2 240 62.9
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 6.7e-81 304.7 215 67.0
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 6.7e-81 304.7 240 61.2
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 5.7e-80 301.6 220 66.8
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 5.7e-80 301.6 255 58.0
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 7.5e-80 301.2 242 60.7
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 1.7e-79 300.1 236 62.3
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 2.2e-79 299.7 248 58.9
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 8.2e-79 297.7 250 59.2
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 8.2e-79 297.7 250 58.4
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 1.4e-78 297.0 242 62.0
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 5.3e-78 295.0 226 63.3
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 9.1e-78 294.3 255 57.3
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 1.2e-77 293.9 226 63.3
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 3.5e-77 292.4 227 63.4
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 7.7e-77 291.2 241 59.3
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 3.8e-76 288.9 217 64.5
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 1.9e-75 286.6 250 58.0
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 3.2e-75 285.8 219 62.6
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 4.2e-75 285.4 248 57.7
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 4.2e-75 285.4 240 59.6
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 5.5e-75 285.0 217 64.1
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 2.3e-73 279.6 208 65.4
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 5.2e-73 278.5 215 62.8
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 5.2e-73 278.5 226 62.8
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 6.8e-73 278.1 250 55.2
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.5e-72 276.9 227 55.9
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 2.0e-72 276.6 241 58.5
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.7e-71 273.5 245 55.5
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.7e-71 273.5 210 62.9
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 4.8e-71 271.9 221 61.1
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 6.3e-71 271.6 232 56.9
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 1.8e-70 270.0 242 52.5
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 3.1e-70 269.2 235 55.7
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 7.0e-70 268.1 235 55.7
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 3.8e-68 262.3 250 54.4
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.8e-68 262.3 232 55.2
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 5.0e-68 261.9 249 54.2
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 2.5e-67 259.6 233 53.6
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 3.2e-67 259.2 236 53.4
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 9.4e-67 257.7 245 55.1
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 8.0e-66 254.6 239 53.1
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.0e-64 250.0 248 52.0
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 6.3e-63 245.0 201 59.7
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 9.2e-62 241.1 236 51.3
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.0e-60 237.7 231 47.6
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 1.3e-60 237.3 177 67.2
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 3.8e-60 235.7 234 50.9
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 6.6e-60 235.0 220 52.3
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 7.3e-59 231.5 229 48.9
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 6.8e-57 224.9 212 54.7
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 2.6e-56 223.0 157 69.4
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 2.2e-55 219.9 225 46.7
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 1.3e-52 210.7 259 43.6
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 3.9e-52 209.1 180 57.2
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.6e-52 208.4 223 43.9
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 5.8e-48 195.3 169 57.4
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 1.1e-46 191.0 239 39.7
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 1.8e-41 173.7 157 55.4
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 2.2e-39 166.8 150 55.3
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 5.6e-35 152.1 168 45.2
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.2e-29 134.4 96 67.7
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 2.6e-24 116.7 80 66.2
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.4e-23 112.1 100 48.0
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 1.8e-17 94.0 170 30.0


User provided reference genes

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