Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G083800 Prunus persica HOM05D008821 ORTHO05D010464 1.0e-77 293.5 164 100.0
RcHm_v2.0_Chr5g0014511 Rosa chinensis HOM05D008821 ORTHO05D010464 5.0e-45 184.9 164 63.4
FvH4_3g05210 Fragaria vesca HOM05D008821 ORTHO05D010464 7.0e-39 164.5 162 59.3
FAN21G0539 Fragaria x ananassa HOM05D008821 ORTHO05D010464 1.0e-37 160.6 162 59.3
FAN16G1747 Fragaria x ananassa HOM05D008821 ORTHO05D010464 1.5e-36 156.8 162 58.6
FAN16G2928 Fragaria x ananassa HOM05D008821 ORTHO05D010464 9.5e-36 154.1 165 58.2
CiPaw.09G121300 Carya illinoinensis HOM05D008821 ORTHO05D010464 2.5e-28 129.4 150 46.7
Thecc.06G147000 Theobroma cacao HOM05D008821 ORTHO05D010464 6.8e-26 121.3 150 49.3
Gohir.D06G143700 Gossypium hirsutum HOM05D008821 ORTHO05D010464 2.1e-22 109.8 154 44.2
Gohir.A06G139000 Gossypium hirsutum HOM05D008821 ORTHO05D010464 3.5e-22 109.0 154 43.5
Gorai.010G167500 Gossypium raimondii HOM05D008821 ORTHO05D010464 4.6e-22 108.6 154 44.2
Nn4g26609 Nelumbo nucifera HOM05D008821 ORTHO05D010464 3.3e-20 102.4 153 42.5
TAR460G0006 Trochodendron aralioides HOM05D008821 ORTHO05D010464 4.0e-18 95.5 151 43.0
Atru.chr10.1160 Acer truncatum HOM05D008821 ORTHO05D010464 2.0e-17 93.2 167 40.1
Lj4g0018254 Lotus japonicus HOM05D008821 ORTHO05D010464 2.0e-17 93.2 156 39.7
Lj5g0007792 Lotus japonicus HOM05D008821 ORTHO05D010464 3.8e-16 89.0 156 39.1
PSO541G6549 Papaver somniferum HOM05D008821 ORTHO05D010464 2.4e-15 86.3 157 38.9
Glyma.08G098600 Glycine max HOM05D008821 ORTHO05D010464 3.2e-15 85.9 158 38.6
Manes.15G123932 Manihot esculenta HOM05D008821 ORTHO05D010464 4.2e-15 85.5 149 41.6
Oeu007936.1 Olea europaea HOM05D008821 ORTHO05D010464 4.2e-15 85.5 159 39.0
Glyma.05G142600 Glycine max HOM05D008821 ORTHO05D010464 5.4e-15 85.1 158 39.2
Oeu007934.1 Olea europaea HOM05D008821 ORTHO05D010464 5.4e-15 85.1 159 39.0
Dinv32224 Davidia involucrata HOM05D000116 ORTHO05D000133 1.2e-14 84.0 122 44.3
Phvul.002G180600 Phaseolus vulgaris HOM05D008821 ORTHO05D010464 1.6e-14 83.6 154 40.3
MBI18_g11239_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 1.0e-13 80.9 161 36.6
Aqoxy1G01677 Aquilegia oxysepala HOM05D008821 ORTHO05D010464 3.0e-13 79.3 166 34.3
ClCG01G024780 Citrullus lanatus HOM05D008821 ORTHO05D010464 3.9e-13 79.0 142 43.0
MELO3C007119.2 Cucumis melo HOM05D008821 ORTHO05D010464 3.9e-13 79.0 142 43.0
CsaV3_6G051900 Cucumis sativus L. HOM05D000116 ORTHO05D010464 5.1e-13 78.6 123 45.5
TPR.G9571 Trifolium pratense HOM05D008821 ORTHO05D010464 5.1e-13 78.6 138 40.6
Haze_05636 Corylus avellana HOM05D008821 ORTHO05D010464 5.6e-12 75.1 76 59.2
Lalb_Chr12g0196061 Lupinus albus HOM05D008821 ORTHO05D010464 7.3e-12 74.7 126 39.7
CSS0030437 Camellia sinensis var. sinensis HOM05D008821 ORTHO05D010464 1.6e-11 73.6 136 35.3
Psat7g081560 Pisum sativum HOM05D008821 ORTHO05D010464 3.6e-11 72.4 144 38.9
Cfa000919 Carpinus fangiana HOM05D008821 ORTHO05D010464 8.1e-11 71.2 75 57.3
Medtr5g077560 Medicago truncatula HOM05D008821 ORTHO05D010464 5.2e-10 68.6 144 34.7
Sed0011418 Sechium edule HOM05D008821 ORTHO05D010464 7.6e-09 64.7 115 40.9
Sc24g0001660 Simmondsia chinensis HOM05D008821 ORTHO05D010464 2.9e-08 62.8 123 34.1
arahy.Tifrunner.gnm1.ann1.SDZ0GZ Arachis hypogaea HOM05D008821 ORTHO05D010464 6.4e-08 61.6 124 36.3
arahy.Tifrunner.gnm1.ann1.ZX7BQ2 Arachis hypogaea HOM05D000116 ORTHO05D010464 1.4e-07 60.5 123 35.8
MBI02_g21430_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 2.1e-06 56.6 59 52.5


User provided reference genes

Program Settings