Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.5e-59 231.9 116 100.0
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 9.0e-49 196.8 116 87.1
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.1e-46 189.9 120 78.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 2.5e-46 188.7 119 79.0
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.3e-44 182.2 119 75.6
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 3.3e-43 178.3 113 77.9
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 9.7e-43 176.8 113 78.8
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.3e-42 176.4 113 77.0
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.8e-42 175.3 113 76.1
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 2.8e-42 175.3 113 76.1
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 4.8e-42 174.5 113 78.8
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 8.2e-42 173.7 113 75.2
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.4e-41 172.9 116 75.9
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.1e-41 171.4 113 77.9
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 6.9e-41 170.6 102 82.4
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.2e-40 169.9 113 76.1
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.0e-40 169.1 113 76.1
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 2.0e-40 169.1 113 74.3
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 4.5e-40 167.9 115 74.8
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 5.9e-40 167.5 115 74.8
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.0e-39 166.8 115 74.8
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.0e-39 166.8 114 71.9
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 1.7e-39 166.0 114 71.9
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 2.2e-39 165.6 90 86.7
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 3.8e-39 164.9 113 73.5
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 6.5e-39 164.1 114 74.6
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 8.5e-39 163.7 114 71.9
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 8.5e-39 163.7 114 74.6
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.4e-38 162.9 108 75.0
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 3.2e-38 161.8 94 78.7
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 4.2e-38 161.4 115 70.4
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 4.2e-38 161.4 115 70.4
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 4.2e-38 161.4 115 70.4
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 5.5e-38 161.0 89 85.4
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 5.5e-38 161.0 113 72.6
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 9.4e-38 160.2 113 70.8
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.2e-37 159.8 113 72.6
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-37 159.5 113 69.9
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-37 159.5 113 69.9
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.6e-37 159.5 89 85.4
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 4.7e-37 157.9 91 81.3
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 6.1e-37 157.5 115 68.7
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 6.1e-37 157.5 113 69.9
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 6.1e-37 157.5 113 69.0
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 6.1e-37 157.5 92 81.5
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 6.1e-37 157.5 90 82.2
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 7.9e-37 157.1 113 69.0
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 1.0e-36 156.8 101 75.2
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.0e-36 156.8 115 69.6
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.4e-36 156.4 115 70.4
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.4e-36 156.4 91 82.4
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 1.8e-36 156.0 114 68.4
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 2.3e-36 155.6 114 71.1
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 3.0e-36 155.2 113 68.1
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 3.9e-36 154.8 87 81.6
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 3.9e-36 154.8 114 69.3
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 5.1e-36 154.5 113 69.9
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 6.7e-36 154.1 113 68.1
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 6.7e-36 154.1 114 71.9
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 8.8e-36 153.7 91 81.3
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.5e-35 152.9 114 67.5
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.5e-35 152.9 114 67.5
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 2.6e-35 152.1 86 80.2
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 4.4e-35 151.4 113 69.0
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 5.7e-35 151.0 115 67.0
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 5.7e-35 151.0 85 81.2
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 5.7e-35 151.0 85 81.2
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 5.7e-35 151.0 115 67.0
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 5.7e-35 151.0 104 72.1
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 5.7e-35 151.0 112 67.9
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 7.4e-35 150.6 113 67.3
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.4e-35 150.6 101 75.2
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.3e-34 149.8 114 66.7
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 1.7e-34 149.4 91 75.8
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 1.7e-34 149.4 99 68.7
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.7e-34 149.4 100 74.0
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 2.8e-34 148.7 113 67.3
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 3.7e-34 148.3 104 70.2
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 3.7e-34 148.3 103 70.9
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 6.3e-34 147.5 97 74.2
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.1e-33 146.7 113 63.7
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.4e-33 146.4 112 64.3
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 9.1e-33 143.7 86 74.4
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 3.5e-32 141.7 94 68.1
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 5.9e-32 141.0 75 86.7
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 5.0e-31 137.9 112 60.7
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 6.5e-31 137.5 105 70.5
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 1.5e-30 136.3 75 81.3
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.9e-30 136.0 73 86.3
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.5e-30 135.6 75 82.7
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 5.5e-30 134.4 77 83.1
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 5.5e-30 134.4 108 63.0
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 5.5e-30 134.4 90 72.2
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 7.2e-30 134.0 114 58.8
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.2e-29 133.3 76 81.6
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 8.0e-29 130.6 86 75.6
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.8e-28 129.4 94 66.0
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 3.0e-28 128.6 88 70.5
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 4.4e-27 124.8 76 76.3
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 5.0e-23 111.3 94 59.6
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.9e-22 109.4 125 44.8
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 5.5e-22 107.8 103 51.5
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 2.7e-21 105.5 91 54.9
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.8e-17 92.8 54 79.6
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.6e-16 89.7 77 54.5
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.2e-15 85.9 134 36.6
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 2.2e-10 69.3 116 40.5
MCO15G665 Micromonas commoda HOM05D007268 ORTHO05D009152 2.5e-06 55.8 85 38.8


User provided reference genes

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