Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 1.2e-91 340.1 214 100.0
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 7.4e-73 277.7 210 84.8
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 1.3e-64 250.4 202 68.3
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.0e-61 240.7 227 63.4
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 1.1e-55 220.7 208 72.6
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.1e-52 210.7 201 60.7
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 2.0e-49 199.9 207 57.0
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.7e-48 195.7 198 64.6
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 5.4e-47 191.8 208 63.5
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.6e-46 190.3 201 54.2
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 5.9e-46 188.3 205 53.7
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 5.9e-46 188.3 208 57.7
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 7.7e-46 188.0 207 52.7
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 3.8e-45 185.7 208 51.0
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 4.7e-43 178.7 207 50.7
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 1.4e-42 177.2 199 51.8
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 5.2e-42 175.3 201 62.7
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 5.2e-42 175.3 212 49.5
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 4.4e-41 172.2 207 45.9
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 7.5e-41 171.4 202 50.5
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.9e-40 169.5 208 49.5
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 4.9e-40 168.7 202 48.0
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.4e-39 167.2 202 48.0
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 2.4e-39 166.4 202 46.5
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.6e-38 163.7 208 46.2
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.6e-38 163.7 202 58.9
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.6e-38 163.7 202 58.9
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 5.9e-38 161.8 202 47.5
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 5.9e-38 161.8 202 47.0
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 1.3e-37 160.6 213 45.1
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 1.7e-37 160.2 219 56.6
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 3.3e-36 156.0 229 43.2
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 3.3e-36 156.0 208 56.7
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 4.3e-36 155.6 208 44.7
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 7.3e-36 154.8 209 52.6
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 7.3e-36 154.8 202 44.6
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 3.1e-34 149.4 208 44.2
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 4.0e-34 149.1 230 41.3
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 6.8e-34 148.3 209 57.4
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 8.9e-34 147.9 189 58.2
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.2e-33 147.5 208 43.8
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 1.2e-33 147.5 201 43.8
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.5e-33 147.1 197 47.7
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 1.7e-32 143.7 210 46.2
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 4.9e-32 142.1 208 43.8
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 4.1e-31 139.0 212 45.3
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 4.1e-31 139.0 205 44.9
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 2.0e-30 136.7 205 42.0
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 8.6e-29 131.3 200 42.5
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.3e-28 129.4 189 55.0
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 9.5e-28 127.9 201 52.2
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 9.5e-28 127.9 159 44.7
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.6e-27 127.1 201 51.7
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 2.1e-27 126.7 155 49.0
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 2.8e-27 126.3 201 39.3
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 6.2e-27 125.2 203 38.9
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 6.2e-27 125.2 155 48.4
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 1.4e-26 124.0 148 50.0
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 1.4e-26 124.0 207 40.6
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.8e-26 123.6 148 48.0
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 5.2e-26 122.1 148 47.3
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 6.8e-26 121.7 201 49.8
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 1.2e-25 120.9 161 46.0
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 5.8e-25 118.6 144 47.2
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 1.3e-24 117.5 156 44.2
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.3e-24 117.5 144 45.1
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 2.2e-24 116.7 148 46.6
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 1.4e-23 114.0 99 60.6
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 7.1e-23 111.7 143 62.9
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 3.0e-21 106.3 102 54.9
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 6.6e-21 105.1 176 40.3
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.8e-19 99.8 151 41.1
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 3.6e-19 99.4 146 52.1
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 6.2e-19 98.6 145 42.8
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 8.9e-18 94.7 144 59.7
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 1.7e-16 90.5 106 47.2
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 2.9e-16 89.7 123 43.9
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.8e-16 89.4 142 52.1
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.1e-15 87.8 142 52.1
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 2.4e-15 86.7 122 42.6
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 2.4e-15 86.7 208 33.7
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.1e-15 85.9 144 38.9
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 7.1e-15 85.1 77 62.3
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.6e-14 84.0 130 56.9
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.9e-13 79.3 172 34.9
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 1.2e-11 74.3 106 38.7
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 1.2e-11 74.3 75 57.3
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.0e-09 67.0 77 50.6
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 3.4e-09 66.2 119 35.3
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 3.8e-08 62.8 118 34.7
Ah.16g109120 Amaranthus hybridus HOM05D007451 ORTHO05D009399 2.1e-06 57.0 107 33.6


User provided reference genes

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