Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 3.5e-138 495.0 251 100.0
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 2.3e-89 332.8 254 72.0
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 1.1e-88 330.5 252 69.8
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 5.1e-73 278.5 246 59.3
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 5.1e-73 278.5 246 58.5
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 1.2e-69 267.3 247 59.5
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 8.4e-68 261.2 232 58.6
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.4e-67 260.4 230 59.6
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 5.5e-59 231.9 251 51.8
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 1.4e-57 227.3 246 49.6
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 3.0e-57 226.1 249 51.8
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 9.7e-56 221.1 260 48.8
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 4.8e-55 218.8 244 52.0
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 8.2e-55 218.0 255 47.5
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 1.1e-54 217.6 255 46.7
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 2.2e-52 209.9 252 47.6
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 2.9e-52 209.5 261 45.2
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 3.8e-52 209.1 172 64.0
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 7.9e-50 201.4 198 51.0
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 1.0e-49 201.1 250 45.2
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 1.7e-47 193.7 236 46.6
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 1.8e-46 190.3 261 43.7
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 1.2e-45 187.6 242 42.6
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 1.0e-44 184.5 256 44.1
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 8.5e-44 181.4 233 45.5
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 1.5e-43 180.6 249 44.2
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 5.2e-41 172.2 264 42.8
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 8.8e-41 171.4 201 47.8
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.6e-40 169.9 232 37.9
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 5.7e-40 168.7 288 36.8
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 1.7e-39 167.2 283 39.2
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 2.8e-39 166.4 251 36.7
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.8e-39 166.4 248 39.5
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 1.1e-38 164.5 285 38.9
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 2.4e-38 163.3 248 38.7
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 3.1e-38 162.9 285 39.3
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 9.1e-38 161.4 272 40.1
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.2e-37 161.0 249 38.2
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 4.5e-37 159.1 249 35.3
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.5e-37 159.1 248 37.9
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 7.7e-37 158.3 276 36.6
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 3.8e-36 156.0 249 38.2
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 6.5e-36 155.2 243 37.4
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 4.7e-34 149.1 203 42.9
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 6.1e-34 148.7 199 42.7
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 1.8e-33 147.1 260 36.9
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 1.8e-33 147.1 250 36.8
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 2.3e-33 146.7 267 38.6
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 3.0e-33 146.4 276 37.0
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 3.0e-33 146.4 267 38.6
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 5.2e-33 145.6 201 40.8
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 2.0e-32 143.7 187 40.1
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 5.7e-32 142.1 205 43.4
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 5.7e-32 142.1 197 43.1
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 5.7e-32 142.1 197 43.1
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 5.7e-32 142.1 245 38.8
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 7.5e-32 141.7 205 43.4
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 4.8e-31 139.0 179 43.6
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 1.8e-30 137.1 153 48.4
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.4e-30 136.7 126 57.1
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 5.4e-30 135.6 235 37.9
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.6e-29 134.0 134 53.0
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 7.7e-29 131.7 234 35.9
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 5.0e-28 129.0 261 33.7
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 2.5e-27 126.7 197 41.6
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 7.2e-27 125.2 285 34.7
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 2.7e-26 123.2 134 47.0
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 3.4e-24 116.3 138 40.6
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 3.7e-23 112.8 254 35.4
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 1.6e-21 107.5 130 46.9
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 1.0e-20 104.8 206 35.4
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 3.8e-20 102.8 322 28.3
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.5e-19 100.9 229 31.4
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 3.6e-18 96.3 134 44.8
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 3.6e-18 96.3 150 42.0
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 4.0e-17 92.8 105 38.1
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 5.2e-17 92.4 140 35.7
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 4.9e-15 85.9 138 41.3
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 2.7e-13 80.1 103 43.7
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 3.5e-13 79.7 222 30.2
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 3.1e-09 66.6 145 26.9
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 6.8e-09 65.5 117 34.2
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 8.9e-09 65.1 245 26.9
BcaC02g11516 Brassica carinata HOM05D008587 ORTHO05D010485 9.8e-08 61.6 141 32.6
C04p14490 Brassica napus HOM05D008587 ORTHO05D010485 9.8e-08 61.6 141 32.6
BolC4t23032H Brassica oleracea HOM05D008587 ORTHO05D010485 9.8e-08 61.6 141 32.6
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 9.8e-08 61.6 192 29.7
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 1.3e-07 61.2 100 41.0
A05p11130 Brassica napus HOM05D008587 ORTHO05D010485 1.7e-07 60.8 142 33.1
BraA05t20060Z Brassica rapa HOM05D008587 ORTHO05D010485 1.7e-07 60.8 142 33.1
BcaB02g09532 Brassica carinata HOM05D008587 ORTHO05D010485 2.2e-07 60.5 141 32.6
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 3.7e-07 59.7 195 28.2
CARHR128630 Cardamine hirsuta HOM05D008587 ORTHO05D010485 4.9e-07 59.3 142 30.3
QL05p058149 Quercus lobata HOM05D008587 ORTHO05D010485 6.4e-07 58.9 140 31.4
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 8.3e-07 58.5 142 30.3
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 1.4e-06 57.8 144 30.6
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 1.9e-06 57.4 141 29.8
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 3.2e-06 56.6 144 29.9
Carub.0004s1621 Capsella rubella HOM05D008587 ORTHO05D010485 7.0e-06 55.5 143 29.4
Cfa000946 Carpinus fangiana HOM05D008587 ORTHO05D010485 7.0e-06 55.5 100 36.0
CiPaw.09G123400 Carya illinoinensis HOM05D008587 ORTHO05D010485 9.2e-06 55.1 172 29.7
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 9.2e-06 55.1 142 29.6
FvH4_3g05540 Fragaria vesca HOM05D014465 ORTHO05D010485 9.2e-06 55.1 103 33.0


User provided reference genes

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