Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G080200 Prunus persica HOM05D008329 ORTHO05D010502 1.7e-54 216.1 138 100.0
Cfa000951 Carpinus fangiana HOM05D008329 ORTHO05D010502 4.0e-19 98.6 106 50.9
FvH4_3g05631 Fragaria vesca HOM05D008329 ORTHO05D010502 6.8e-19 97.8 85 60.0
FAN11G1031 Fragaria x ananassa HOM05D008329 ORTHO05D010502 6.8e-19 97.8 85 60.0
Oeu052372.1 Olea europaea HOM05D008329 ORTHO05D010502 4.4e-18 95.1 104 48.1
Lalb_Chr15g0086851 Lupinus albus HOM05D008329 ORTHO05D010502 7.5e-18 94.4 100 52.0
Haze_05589 Corylus avellana HOM05D008329 ORTHO05D010502 1.3e-17 93.6 107 51.4
Potri.004G132400 Populus trichocarpa HOM05D008329 ORTHO05D010502 3.7e-17 92.0 89 60.7
FAN16G0699 Fragaria x ananassa HOM05D008329 ORTHO05D010502 4.9e-17 91.7 83 57.8
Thecc.06G151200 Theobroma cacao HOM05D008329 ORTHO05D010502 4.9e-17 91.7 99 53.5
Duzib235G1274 Durio zibethinus HOM05D008329 ORTHO05D010502 1.1e-16 90.5 98 52.0
Lalb_Chr18g0055481 Lupinus albus HOM05D008329 ORTHO05D010502 1.1e-16 90.5 104 49.0
Manes.15G120700 Manihot esculenta HOM05D008329 ORTHO05D010502 1.4e-16 90.1 110 51.8
Hma1.2p1_0286F.1_g114040 Hydrangea macrophylla HOM05D008329 ORTHO05D010502 2.4e-16 89.4 92 50.0
CiPaw.10G092100 Carya illinoinensis HOM05D008329 ORTHO05D010502 4.1e-16 88.6 98 49.0
Gohir.A05G148400 Gossypium hirsutum HOM05D008329 ORTHO05D010502 5.4e-16 88.2 92 53.3
Gohir.D05G150900 Gossypium hirsutum HOM05D008329 ORTHO05D010502 5.4e-16 88.2 92 53.3
Gorai.009G155000 Gossypium raimondii HOM05D008329 ORTHO05D010502 5.4e-16 88.2 92 53.3
Phvul.006G164500 Phaseolus vulgaris HOM05D008329 ORTHO05D010502 7.0e-16 87.8 112 47.3
QL05p058297 Quercus lobata HOM05D008329 ORTHO05D010502 1.6e-15 86.7 103 48.5
Ca_00545_v3 Cicer arietinum L. HOM05D008329 ORTHO05D010502 3.5e-15 85.5 109 53.2
Nn3g20763 Nelumbo nucifera HOM05D008329 ORTHO05D010502 1.3e-14 83.6 95 49.5
DCAR_003919 Daucus carota HOM05D000413 ORTHO05D000292 2.3e-14 82.8 85 47.1
Medtr2g019510 Medicago truncatula HOM05D008329 ORTHO05D010502 3.0e-14 82.4 113 45.1
Glyma.13G218000 Glycine max HOM05D008329 ORTHO05D010502 3.3e-13 79.0 94 47.9
VMungo0540G1040 Vigna mungo HOM05D008329 ORTHO05D010502 9.5e-13 77.4 95 47.4
CiPaw.09G124100 Carya illinoinensis HOM05D008329 ORTHO05D010502 1.6e-12 76.6 95 45.3
Psat1g190560 Pisum sativum HOM05D008329 ORTHO05D010502 1.6e-12 76.6 114 41.2
Glyma.15G094400 Glycine max HOM05D008329 ORTHO05D010502 2.8e-12 75.9 101 44.6
Atru.chr10.1238 Acer truncatum HOM05D008329 ORTHO05D010502 3.6e-12 75.5 106 48.1
TWI73G0626 Tripterygium wilfordii HOM05D008329 ORTHO05D010502 8.1e-12 74.3 84 51.2
MBI07_g26350_MAGBIO Magnolia biondii HOM05D008329 ORTHO05D010502 3.1e-11 72.4 99 43.4
TPR.G26681 Trifolium pratense HOM05D008329 ORTHO05D010502 4.0e-11 72.0 114 43.0
COL.COLO4_31077 Corchorus olitorius HOM05D008329 ORTHO05D010502 5.2e-11 71.6 48 72.9
Migut.M00911 Erythranthe guttata HOM05D008329 ORTHO05D010502 5.2e-11 71.6 49 69.4
C01p12160 Brassica napus HOM05D008329 ORTHO05D010502 7.5e-10 67.8 103 44.7
BolC1t01190H Brassica oleracea HOM05D008329 ORTHO05D010502 2.2e-09 66.2 103 43.7
Sp7g15760 Schrenkiella parvula HOM05D008329 ORTHO05D010502 4.9e-09 65.1 97 41.2
PGSC0003DMG400037562 Solanum tuberosum HOM05D008329 ORTHO05D010502 4.9e-09 65.1 34 76.5
A01p10240 Brassica napus HOM05D008329 ORTHO05D010502 6.4e-09 64.7 103 42.7
BraA01t00969Z Brassica rapa HOM05D008329 ORTHO05D010502 2.4e-08 62.8 103 41.7
Sed0024982 Sechium edule HOM05D008329 ORTHO05D010502 3.2e-08 62.4 39 69.2
AT4G18335 Arabidopsis thaliana HOM05D008329 ORTHO05D010502 4.1e-08 62.0 105 38.1
BcaC09g51533 Brassica carinata HOM05D008329 ORTHO05D010502 4.1e-08 62.0 67 53.7
BcaNung00019 Brassica carinata HOM05D008329 ORTHO05D010502 4.1e-08 62.0 67 53.7
CsaV3_6G051710 Cucumis sativus L. HOM05D008329 ORTHO05D010502 9.2e-08 60.8 42 69.0
FAN21G0831 Fragaria x ananassa HOM05D008329 ORTHO05D010502 9.2e-08 60.8 62 56.5
Thhalv10027023m.g Eutrema salsugineum HOM05D008329 ORTHO05D010502 1.6e-07 60.1 107 42.1
AL7G36060 Arabidopsis lyrata HOM05D008329 ORTHO05D010502 4.6e-07 58.5 100 39.0
arahy.Tifrunner.gnm1.ann1.3F4JYQ Arachis hypogaea HOM05D008329 ORTHO05D010502 6.0e-07 58.2 45 66.7
THA.LOC104812857 Tarenaya hassleriana HOM05D008329 ORTHO05D010502 6.0e-07 58.2 104 38.5
arahy.Tifrunner.gnm1.ann1.I5NJB4 Arachis hypogaea HOM05D008329 ORTHO05D010502 1.3e-06 57.0 44 65.9
MELO3C007136.2 Cucumis melo HOM05D008329 ORTHO05D010502 1.7e-06 56.6 72 44.4
PGR042G3823 Punica granatum HOM05D008329 ORTHO05D010502 3.0e-06 55.8 37 64.9
Lsat_1_v5_gn_7_27261 Lactuca sativa HOM05D008329 ORTHO05D010502 3.9e-06 55.5 35 68.6
ClCG01G024590 Citrullus lanatus HOM05D008329 ORTHO05D010502 8.6e-06 54.3 38 65.8


User provided reference genes

Program Settings