Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 9.8e-60 233.4 131 100.0
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 7.1e-58 227.3 131 96.9
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 3.5e-57 224.9 131 95.4
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 7.3e-55 217.2 131 92.4
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.7e-54 214.5 131 91.6
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 6.2e-54 214.2 130 91.5
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.8e-53 212.6 130 90.8
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 5.2e-53 211.1 131 87.8
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 5.2e-53 211.1 131 87.8
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.2e-52 209.9 131 87.8
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.2e-52 209.9 131 87.0
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 2.6e-52 208.8 130 88.5
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.6e-52 208.8 131 87.8
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 2.6e-52 208.8 131 87.0
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 2.6e-52 208.8 131 85.5
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 3.4e-52 208.4 131 86.3
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 4.4e-52 208.0 131 86.3
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 5.8e-52 207.6 129 88.4
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 5.8e-52 207.6 131 86.3
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 5.8e-52 207.6 131 84.7
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 9.9e-52 206.8 131 85.5
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.3e-51 206.5 127 89.0
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.7e-51 206.1 131 86.3
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 2.9e-51 205.3 129 86.8
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 3.7e-51 204.9 129 86.8
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 3.7e-51 204.9 131 84.0
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 4.9e-51 204.5 131 84.7
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 4.9e-51 204.5 131 86.3
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 4.9e-51 204.5 129 86.0
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 8.4e-51 203.8 131 84.7
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 8.4e-51 203.8 131 84.7
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.1e-50 203.4 127 86.6
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.4e-50 203.0 131 83.2
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 1.4e-50 203.0 129 85.3
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 1.4e-50 203.0 129 86.0
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 1.9e-50 202.6 127 87.4
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.4e-50 202.2 130 84.6
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 2.4e-50 202.2 131 84.0
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 3.2e-50 201.8 129 84.5
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 3.2e-50 201.8 131 84.0
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 3.2e-50 201.8 125 88.0
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 82.4
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.1e-50 201.4 130 84.6
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 4.1e-50 201.4 130 86.9
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 84.7
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 4.1e-50 201.4 131 84.0
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 4.1e-50 201.4 127 87.4
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 5.4e-50 201.1 130 84.6
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 5.4e-50 201.1 131 84.0
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 5.4e-50 201.1 129 84.5
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 9.2e-50 200.3 127 85.8
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 84.6
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 84.6
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 1.2e-49 199.9 127 85.8
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 1.2e-49 199.9 130 84.6
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 2.7e-49 198.7 129 82.9
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 2.7e-49 198.7 129 83.7
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.7e-49 198.7 130 83.8
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 4.6e-49 198.0 131 84.7
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 6.0e-49 197.6 130 84.6
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 1.0e-48 196.8 130 81.5
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 1.0e-48 196.8 130 81.5
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.7e-48 196.1 127 82.7
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.3e-48 195.7 144 79.2
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 3.9e-48 194.9 131 80.2
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 3.9e-48 194.9 131 80.2
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 3.9e-48 194.9 131 80.2
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 1.5e-47 193.0 131 79.4
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 1.5e-47 193.0 131 79.4
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 2.5e-47 192.2 126 82.5
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 3.3e-47 191.8 140 78.6
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 5.6e-47 191.0 131 80.2
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 7.3e-47 190.7 130 82.3
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-46 189.9 136 77.9
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.6e-46 189.5 131 77.1
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 2.8e-46 188.7 130 80.0
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.7e-46 188.0 129 79.1
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 6.2e-46 187.6 131 79.4
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.1e-45 186.8 129 78.3
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 2.4e-45 185.7 105 97.1
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 6.8e-45 184.1 113 85.8
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 1.2e-44 183.3 112 85.7
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 1.2e-44 183.3 113 86.7
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 4.4e-44 181.4 186 60.2
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 5.8e-44 181.0 113 86.7
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.3e-43 179.9 134 76.9
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 1.3e-43 179.9 113 84.1
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 2.9e-43 178.7 111 82.9
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 2.9e-43 178.7 112 83.9
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 6.4e-43 177.6 124 74.2
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.4e-43 177.6 129 75.2
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 1.9e-42 176.0 106 89.6
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 4.2e-42 174.9 110 85.5
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.1e-41 172.6 121 80.2
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.7e-41 172.2 121 80.2
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 1.0e-40 170.2 108 83.3
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.7e-40 169.5 107 83.2
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 3.9e-40 168.3 105 86.7
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 3.9e-40 168.3 105 85.7
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 3.9e-40 168.3 116 82.8
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 5.1e-40 167.9 128 74.2
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 6.6e-40 167.5 131 74.0
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 8.7e-40 167.2 113 77.9
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 2.5e-39 165.6 116 77.6
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 4.3e-39 164.9 122 76.2
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.3e-38 163.3 112 78.6
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 1.1e-37 160.2 110 78.2
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 6.9e-37 157.5 126 66.7
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 2.6e-36 155.6 125 64.0
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 2.6e-36 155.6 130 69.2
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 3.4e-36 155.2 112 75.9
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 4.4e-36 154.8 92 88.0
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 1.3e-35 153.3 131 61.8
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 1.7e-35 152.9 163 56.4
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 2.2e-35 152.5 92 87.0
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 4.9e-35 151.4 133 67.7
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.1e-34 150.2 92 84.8
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.4e-34 149.8 108 70.4
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 3.2e-34 148.7 89 86.5
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 3.2e-34 148.7 92 87.0
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 3.2e-34 148.7 92 83.7
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 3.2e-34 148.7 87 88.5
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 4.2e-34 148.3 87 88.5
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 7.1e-34 147.5 92 83.7
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 2.1e-33 146.0 88 89.8
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 2.1e-33 146.0 117 70.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 2.7e-33 145.6 84 88.1
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.3e-32 143.3 95 78.9
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 6.6e-32 141.0 131 66.4
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 5.6e-31 137.9 87 86.2
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 4.8e-30 134.8 90 78.9
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 5.8e-28 127.9 102 70.6
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.9e-27 125.6 95 76.8
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 6.4e-27 124.4 92 76.1
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.4e-26 123.2 92 76.1
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 4.2e-26 121.7 71 88.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.2e-25 120.2 88 75.0
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.1e-21 105.5 61 90.2
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 3.1e-21 105.5 125 47.2
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 5.3e-21 104.8 202 41.6
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 1.3e-19 100.1 63 82.5
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 6.5e-19 97.8 67 73.1
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 2.5e-18 95.9 111 55.0
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 3.2e-18 95.5 64 75.0
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 5.5e-18 94.7 121 42.1
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 9.3e-18 94.0 66 72.7
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 9.3e-18 94.0 64 73.4
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 1.2e-17 93.6 78 62.8
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 4.6e-17 91.7 65 72.3
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 3.0e-16 89.0 68 67.6
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.3e-14 83.6 114 40.4
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 2.4e-13 79.3 173 38.7
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 2.5e-10 69.3 124 42.7
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 9.3e-10 67.4 123 32.5
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 4.8e-06 55.1 51 60.8


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