Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G074700 Prunus persica HOM05D003390 ORTHO05D004189 7.7e-74 280.4 143 100.0
MD05G1290900 Malus domestica HOM05D003390 ORTHO05D004189 1.5e-40 169.9 116 72.4
MD10G1266700 Malus domestica HOM05D003390 ORTHO05D004189 4.2e-40 168.3 115 73.9
MD16G1203400 Malus domestica HOM05D003390 ORTHO05D004189 4.2e-40 168.3 115 73.9
Cpa.g.sc17.128 Carica papaya HOM05D003390 ORTHO05D004189 1.6e-39 166.4 116 72.4
RcHm_v2.0_Chr5g0013021 Rosa chinensis HOM05D003390 ORTHO05D004189 2.8e-39 165.6 116 71.6
TWI09G1133 Tripterygium wilfordii HOM05D003390 ORTHO05D004189 3.6e-39 165.2 116 71.6
Lj1A1183G65 Lonicera japonica HOM05D003390 ORTHO05D004189 6.1e-39 164.5 116 71.6
Lalb_Chr18g0057721 Lupinus albus HOM05D003390 ORTHO05D004189 8.0e-39 164.1 116 70.7
Rhsim12G0071900 Rhododendron simsii HOM05D003390 ORTHO05D004189 8.0e-39 164.1 116 69.0
Eucgr.D00339 Eucalyptus grandis HOM05D003390 ORTHO05D004189 2.3e-38 162.5 115 70.4
FvH4_3g06290 Fragaria vesca HOM05D003390 ORTHO05D004189 2.3e-38 162.5 116 70.7
FAN11G2053 Fragaria x ananassa HOM05D003390 ORTHO05D004189 2.3e-38 162.5 116 70.7
Solyc02g021480.4 Solanum lycopersicum HOM05D003390 ORTHO05D004189 2.3e-38 162.5 116 69.0
Sopen02g005990 Solanum pennellii HOM05D003390 ORTHO05D004189 2.3e-38 162.5 116 69.0
Glyma.15G125900 Glycine max HOM05D003390 ORTHO05D004189 3.0e-38 162.2 116 69.8
Phvul.006G132300 Phaseolus vulgaris HOM05D003390 ORTHO05D004189 3.0e-38 162.2 116 69.0
TAR386G0005 Trochodendron aralioides HOM05D003390 ORTHO05D004189 4.0e-38 161.8 116 69.8
TAR627G0573 Trochodendron aralioides HOM05D003390 ORTHO05D004189 4.0e-38 161.8 116 69.8
Nitab4.5_0000206g0100 Nicotiana tabacum HOM05D003390 ORTHO05D004189 5.2e-38 161.4 116 69.0
Nitab4.5_0001826g0010 Nicotiana tabacum HOM05D003390 ORTHO05D004189 5.2e-38 161.4 116 69.0
Prupe.4G074800 Prunus persica HOM05D003390 ORTHO05D004189 5.2e-38 161.4 115 73.0
Actinidia39555 Actinidia chinensis HOM05D003390 ORTHO05D004189 6.8e-38 161.0 116 72.4
Ca_11357_v3 Cicer arietinum L. HOM05D003390 ORTHO05D004189 6.8e-38 161.0 116 70.7
Lj6g0006873 Lotus japonicus HOM05D003390 ORTHO05D004189 6.8e-38 161.0 116 70.7
Cfa000990 Carpinus fangiana HOM05D003390 ORTHO05D004189 8.9e-38 160.6 116 68.1
DCAR_005073 Daucus carota HOM05D003390 ORTHO05D004189 8.9e-38 160.6 116 69.0
FAN25G2602 Fragaria x ananassa HOM05D003390 ORTHO05D004189 1.2e-37 160.2 116 69.0
Sabra16G0232300 Salix brachista HOM05D003390 ORTHO05D004189 1.2e-37 160.2 116 69.0
Migut.M00950 Erythranthe guttata HOM05D003390 ORTHO05D004189 1.5e-37 159.8 117 68.4
LjContig00049g0028197 Lotus japonicus HOM05D003390 ORTHO05D004189 1.5e-37 159.8 118 68.6
VMungo0540G2227 Vigna mungo HOM05D003390 ORTHO05D004189 1.5e-37 159.8 116 68.1
Duzib192G0036 Durio zibethinus HOM05D003390 ORTHO05D004189 2.0e-37 159.5 115 69.6
Manes.17G065600 Manihot esculenta HOM05D003390 ORTHO05D004189 2.0e-37 159.5 115 71.3
QL05p060163 Quercus lobata HOM05D003390 ORTHO05D004189 2.0e-37 159.5 116 65.5
Potri.001G353000 Populus trichocarpa HOM05D003390 ORTHO05D004189 2.6e-37 159.1 116 68.1
FAN21G1255 Fragaria x ananassa HOM05D003390 ORTHO05D004189 3.4e-37 158.7 116 68.1
Psat1g170120 Pisum sativum HOM05D003390 ORTHO05D004189 3.4e-37 158.7 116 69.8
FAN16G0009 Fragaria x ananassa HOM05D003390 ORTHO05D004189 4.4e-37 158.3 116 68.1
CiPaw.09G127400 Carya illinoinensis HOM05D003390 ORTHO05D004189 5.7e-37 157.9 116 67.2
AUR62035789 Chenopodium quinoa HOM05D003390 ORTHO05D004189 5.7e-37 157.9 116 66.4
PGSC0003DMG400003171 Solanum tuberosum HOM05D003390 ORTHO05D004189 5.7e-37 157.9 116 67.2
Thecc.06G156600 Theobroma cacao HOM05D003390 ORTHO05D004189 5.7e-37 157.9 115 68.7
MSTRG.7463 Avicennia marina HOM05D003390 ORTHO05D004189 9.8e-37 157.1 116 66.4
Lj2A310T45 Lonicera japonica HOM05D003390 ORTHO05D004189 9.8e-37 157.1 116 66.4
Nitab4.5_0002209g0030 Nicotiana tabacum HOM05D003390 ORTHO05D004189 9.8e-37 157.1 116 69.0
TPR.G17505 Trifolium pratense HOM05D003390 ORTHO05D004189 9.8e-37 157.1 116 69.0
Cc09_g09610 Coffea canephora HOM05D003390 ORTHO05D004189 1.3e-36 156.8 116 66.4
Dinv30696 Davidia involucrata HOM05D003390 ORTHO05D004189 1.3e-36 156.8 116 69.8
Haze_05526 Corylus avellana HOM05D003390 ORTHO05D004189 1.7e-36 156.4 116 66.4
AUR62027570 Chenopodium quinoa HOM05D003390 ORTHO05D004189 2.2e-36 156.0 116 65.5
Ciclev10014753m.g Citrus clementina HOM05D003390 ORTHO05D004189 2.8e-36 155.6 119 67.2
Nitab4.5_0003104g0070 Nicotiana tabacum HOM05D003390 ORTHO05D004189 3.7e-36 155.2 116 68.1
Aa31LG6G5840 Aethionema arabicum HOM05D003390 ORTHO05D004189 4.9e-36 154.8 111 67.6
Ah.09g232910 Amaranthus hybridus HOM05D003390 ORTHO05D004189 6.3e-36 154.5 120 61.7
Aqoxy1G01824 Aquilegia oxysepala HOM05D003390 ORTHO05D004189 6.3e-36 154.5 115 68.7
Gohir.D06G205600 Gossypium hirsutum HOM05D003390 ORTHO05D004189 6.3e-36 154.5 115 67.8
Gorai.010G239900 Gossypium raimondii HOM05D003390 ORTHO05D004189 6.3e-36 154.5 115 67.8
Medtr2g028770 Medicago truncatula HOM05D003390 ORTHO05D004189 6.3e-36 154.5 116 68.1
GSVIVG01021390001 Vitis vinifera HOM05D003390 ORTHO05D004189 6.3e-36 154.5 115 67.8
CiPaw.09G127300 Carya illinoinensis HOM05D003390 ORTHO05D004189 8.3e-36 154.1 116 66.4
Gohir.A06G198200 Gossypium hirsutum HOM05D003390 ORTHO05D004189 8.3e-36 154.1 115 67.0
Peaxi162Scf00121g02312 Petunia axillaris HOM05D003390 ORTHO05D004189 8.3e-36 154.1 116 67.2
SHI35740 Sapria himalayana HOM05D003390 ORTHO05D004189 8.3e-36 154.1 116 65.5
Medtr5g091570 Medicago truncatula HOM05D003390 ORTHO05D004189 1.1e-35 153.7 116 66.4
Psat2g016080 Pisum sativum HOM05D003390 ORTHO05D004189 1.1e-35 153.7 116 66.4
Ca_06279_v3 Cicer arietinum L. HOM05D003390 ORTHO05D004189 1.4e-35 153.3 116 69.0
Ca_30614_v3 Cicer arietinum L. HOM05D003390 ORTHO05D004189 1.4e-35 153.3 116 69.0
HanXRQChr16g0525801 Helianthus annuus HOM05D003390 ORTHO05D004189 1.4e-35 153.3 119 65.5
PGR031G1555 Punica granatum HOM05D003390 ORTHO05D004189 1.4e-35 153.3 115 67.8
THA.LOC104820634 Tarenaya hassleriana HOM05D003390 ORTHO05D004189 1.4e-35 153.3 108 69.4
ClCG03G007130 Citrullus lanatus HOM05D003390 ORTHO05D004189 1.8e-35 152.9 116 64.7
Lalb_Chr10g0106641 Lupinus albus HOM05D003390 ORTHO05D004189 1.8e-35 152.9 118 63.6
Peaxi162Scf00035g02617 Petunia axillaris HOM05D003390 ORTHO05D004189 1.8e-35 152.9 116 67.2
SGA_v2.0_scaffold333G49014 Striga asiatica HOM05D003390 ORTHO05D004189 1.8e-35 152.9 116 64.7
arahy.Tifrunner.gnm1.ann1.WT2YK3 Arachis hypogaea HOM05D003390 ORTHO05D004189 2.4e-35 152.5 116 63.8
CARHR029610 Cardamine hirsuta HOM05D003390 ORTHO05D004189 2.4e-35 152.5 108 68.5
SalBow8G0013 Salvia bowleyana HOM05D003390 ORTHO05D002303 2.4e-35 152.5 116 67.2
Haze_13511 Corylus avellana HOM05D003390 ORTHO05D004189 5.4e-35 151.4 116 64.7
Prupe.3G173900 Prunus persica HOM05D003390 ORTHO05D004189 5.4e-35 151.4 114 65.8
BcaC01g00142 Brassica carinata HOM05D003390 ORTHO05D004189 9.2e-35 150.6 108 66.7
C03p76240 Brassica napus HOM05D003390 ORTHO05D004189 9.2e-35 150.6 108 66.7
BolC3t19880H Brassica oleracea HOM05D003390 ORTHO05D004189 9.2e-35 150.6 108 66.7
CAN.G2018.1 Capsicum annuum HOM05D003390 ORTHO05D004189 9.2e-35 150.6 108 71.3
MELO3C002711.2 Cucumis melo HOM05D003390 ORTHO05D004189 9.2e-35 150.6 116 62.9
Sp1g25730 Schrenkiella parvula HOM05D003390 ORTHO05D004189 9.2e-35 150.6 108 67.6
PSO135G0210 Papaver somniferum HOM05D003390 ORTHO05D004189 1.2e-34 150.2 116 61.2
BcaB03g12182 Brassica carinata HOM05D003390 ORTHO05D004189 1.6e-34 149.8 108 66.7
ECA234G1186 Erigeron canadensis HOM05D003390 ORTHO05D004189 1.6e-34 149.8 114 69.3
arahy.Tifrunner.gnm1.ann1.QBP2NG Arachis hypogaea HOM05D003390 ORTHO05D004189 2.0e-34 149.4 116 62.1
PGR042G1945 Punica granatum HOM05D003390 ORTHO05D004189 2.0e-34 149.4 116 63.8
ECA232G3556 Erigeron canadensis HOM05D003390 ORTHO05D004189 3.5e-34 148.7 115 67.0
AL1G43660 Arabidopsis lyrata HOM05D003390 ORTHO05D004189 4.5e-34 148.3 108 64.8
DCAR_013317 Daucus carota HOM05D003390 ORTHO05D004189 4.5e-34 148.3 118 61.0
Oeu001052.1 Olea europaea HOM05D003390 ORTHO05D004189 4.5e-34 148.3 116 64.7
Eucgr.A01981 Eucalyptus grandis HOM05D003390 ORTHO05D004189 5.9e-34 147.9 116 66.4
RcHm_v2.0_Chr2g0151651 Rosa chinensis HOM05D003390 ORTHO05D004189 5.9e-34 147.9 114 65.8
TAR626G0692 Trochodendron aralioides HOM05D003390 ORTHO05D004189 5.9e-34 147.9 111 66.7
AT1G29820 Arabidopsis thaliana HOM05D003390 ORTHO05D004189 7.8e-34 147.5 108 64.8
A08p24810 Brassica napus HOM05D003390 ORTHO05D004189 7.8e-34 147.5 104 68.3
BraA08t34436Z Brassica rapa HOM05D003390 ORTHO05D004189 7.8e-34 147.5 104 68.3
arahy.Tifrunner.gnm1.ann1.0JHG5Q Arachis hypogaea HOM05D003390 ORTHO05D004189 1.0e-33 147.1 118 66.1
EL10Ac8g19781 Beta vulgaris HOM05D003390 ORTHO05D004189 1.0e-33 147.1 116 57.8
CDE08G1393 Ceratophyllum demersum HOM05D003390 ORTHO05D004189 1.0e-33 147.1 115 60.0
arahy.Tifrunner.gnm1.ann1.VAF4MI Arachis hypogaea HOM05D003390 ORTHO05D004189 1.3e-33 146.7 118 65.3
HanXRQChr05g0147821 Helianthus annuus HOM05D003390 ORTHO05D004189 1.3e-33 146.7 116 62.9
Thhalv10007315m.g Eutrema salsugineum HOM05D003390 ORTHO05D004189 1.7e-33 146.4 108 63.9
Hund21490 Selenicereus undatus HOM05D003390 ORTHO05D004189 1.7e-33 146.4 120 63.3
ATR1131G058 Amborella trichopoda HOM05D003390 ORTHO05D004189 2.3e-33 146.0 116 59.5
COL.COLO4_07487 Corchorus olitorius HOM05D003390 ORTHO05D004189 2.3e-33 146.0 110 68.2
Thecc.01G163000 Theobroma cacao HOM05D003390 ORTHO05D004189 2.3e-33 146.0 116 63.8
MBI07_g07829_MAGBIO Magnolia biondii HOM05D003390 ORTHO05D004189 2.9e-33 145.6 116 62.9
Atru.chr6.2080 Acer truncatum HOM05D003390 ORTHO05D004189 5.0e-33 144.8 112 64.3
Cc05_g09550 Coffea canephora HOM05D003390 ORTHO05D004189 6.6e-33 144.4 118 61.0
TPR.G12521 Trifolium pratense HOM05D003390 ORTHO05D004189 6.6e-33 144.4 124 59.7
CANSAT35G0642 Cannabis sativa HOM05D003390 ORTHO05D004189 1.1e-32 143.7 104 67.3
Carub.0001s2807 Capsella rubella HOM05D003390 ORTHO05D004189 1.1e-32 143.7 108 64.8
PGSC0003DMG400021242 Solanum tuberosum HOM05D003390 ORTHO05D004189 1.1e-32 143.7 111 65.8
unitig_748.g7439 Utricularia gibba HOM05D003390 ORTHO05D004189 1.1e-32 143.7 108 64.8
Rhsim06G0115300 Rhododendron simsii HOM05D003390 ORTHO05D004189 1.5e-32 143.3 113 61.9
TPR.G17499 Trifolium pratense HOM05D003390 ORTHO05D004189 1.5e-32 143.3 108 66.7
vmacro12466 Vaccinium macrocarpon HOM05D003390 ORTHO05D004189 1.5e-32 143.3 113 63.7
Eucgr.A01987 Eucalyptus grandis HOM05D003390 ORTHO05D004189 1.9e-32 142.9 117 60.7
Solyc10g007740.3 Solanum lycopersicum HOM05D003390 ORTHO05D004189 1.9e-32 142.9 108 67.6
Sopen10g003650 Solanum pennellii HOM05D003390 ORTHO05D004189 1.9e-32 142.9 108 67.6
Os01g0601000 Oryza sativa ssp. japonica HOM05D003390 ORTHO05D004189 2.5e-32 142.5 117 59.0
Lsat_1_v5_gn_0_8061 Lactuca sativa HOM05D003390 ORTHO05D004189 4.3e-32 141.7 115 61.7
Sed0005552 Sechium edule HOM05D003390 ORTHO05D004189 4.3e-32 141.7 104 67.3
SGA_v2.0_scaffold4G02117 Striga asiatica HOM05D003390 ORTHO05D004189 4.3e-32 141.7 112 64.3
Gorai.006G007900 Gossypium raimondii HOM05D003390 ORTHO05D004189 5.6e-32 141.4 117 65.0
QL08p044424 Quercus lobata HOM05D003390 ORTHO05D004189 7.3e-32 141.0 115 63.5
CsaV3_1G032710 Cucumis sativus L. HOM05D003390 ORTHO05D004189 1.2e-31 140.2 114 61.4
Glyma.02G285600 Glycine max HOM05D003390 ORTHO05D004189 1.6e-31 139.8 113 62.8
Gohir.A09G007100 Gossypium hirsutum HOM05D003390 ORTHO05D004189 1.6e-31 139.8 117 64.1
COL.COLO4_08451 Corchorus olitorius HOM05D003390 ORTHO05D004189 2.8e-31 139.0 112 65.2
HPP92_008023 Vanilla planifolia HOM05D003390 ORTHO05D004189 3.6e-31 138.7 117 61.5
Lsat_1_v5_gn_4_29721 Lactuca sativa HOM05D003390 ORTHO05D004189 8.0e-31 137.5 99 67.7
Migut.H02104 Erythranthe guttata HOM05D003390 ORTHO05D004189 1.4e-30 136.7 107 61.7
Oeu020929.2 Olea europaea HOM05D003390 ORTHO05D004189 4.0e-30 135.2 118 61.0
SalBow7G4851 Salvia bowleyana HOM05D003390 ORTHO05D004189 3.4e-29 132.1 108 62.0
Os01g0664100 Oryza sativa ssp. japonica HOM05D003390 ORTHO05D004189 5.8e-29 131.3 112 56.2
AT1G29830 Arabidopsis thaliana HOM05D003390 ORTHO05D004189 2.2e-28 129.4 108 61.1
CARHR138010 Cardamine hirsuta HOM05D003390 ORTHO05D004189 8.3e-28 127.5 113 58.4
AL4G41580 Arabidopsis lyrata HOM05D003390 ORTHO05D004189 3.2e-27 125.6 110 59.1
SEGI_30082 Sequoiadendron giganteum HOM05D003390 ORTHO05D004189 3.2e-27 125.6 119 52.1
AT2G42950 Arabidopsis thaliana HOM05D003390 ORTHO05D004189 9.2e-27 124.0 110 56.4
Thhalv10016539m.g Eutrema salsugineum HOM05D003390 ORTHO05D004189 9.2e-27 124.0 118 55.9
Sp4g25080 Schrenkiella parvula HOM05D003390 ORTHO05D004189 9.2e-27 124.0 110 58.2
FAN09G2932 Fragaria x ananassa HOM05D003390 ORTHO05D004189 4.6e-26 121.7 98 65.3
Lj1A614G6 Lonicera japonica HOM05D003390 ORTHO05D004189 4.6e-26 121.7 116 55.2
Aa31LG1G24700 Aethionema arabicum HOM05D003390 ORTHO05D004189 7.8e-26 120.9 113 54.9
Carub.0004s2542 Capsella rubella HOM05D003390 ORTHO05D004189 1.3e-25 120.2 110 56.4
FAN02G0419 Fragaria x ananassa HOM05D003390 ORTHO05D004189 1.3e-25 120.2 98 64.3
BcaC02g07214 Brassica carinata HOM05D003390 ORTHO05D004189 3.0e-25 119.0 119 54.6
C04p69990 Brassica napus HOM05D003390 ORTHO05D004189 3.0e-25 119.0 119 54.6
BolC4t28499H Brassica oleracea HOM05D003390 ORTHO05D004189 3.0e-25 119.0 119 54.6
BNapus_Darmor_BZH_scaffold_64p00180 Brassica napus HOM05D003390 ORTHO05D004189 5.0e-25 118.2 110 57.3
BraA04t18699Z Brassica rapa HOM05D003390 ORTHO05D004189 5.0e-25 118.2 110 57.3
BcaB06g29273 Brassica carinata HOM05D003390 ORTHO05D004189 1.5e-24 116.7 110 56.4
Eucgr.A01984 Eucalyptus grandis HOM05D003390 ORTHO05D004189 1.9e-24 116.3 105 60.0
FAN19G1589 Fragaria x ananassa HOM05D003390 ORTHO05D004189 1.6e-23 113.2 106 54.7
FvH4_1g24850 Fragaria vesca HOM05D003390 ORTHO05D004189 8.0e-23 110.9 106 53.8
LjContig00141g0021144 Lotus japonicus HOM05D003390 ORTHO05D004791 8.0e-23 110.9 112 56.2
FAN26G2057 Fragaria x ananassa HOM05D003390 ORTHO05D004189 6.8e-22 107.8 106 53.8
Pp3c9_16960 Physcomitrium patens HOM05D003390 ORTHO05D004189 2.6e-21 105.9 103 51.5
AagrBONN_evm.TU.Sc2ySwM_228.3525 Anthoceros agrestis HOM05D003390 ORTHO05D004189 2.2e-20 102.8 111 48.6
Mapoly0130s0010 Marchantia polymorpha HOM05D003390 ORTHO05D004189 3.5e-18 95.5 110 50.9
Pp3c9_12460 Physcomitrium patens HOM05D003390 ORTHO05D004189 5.0e-17 91.7 107 43.9
Pp3c15_4880 Physcomitrium patens HOM05D003390 ORTHO05D004189 1.1e-16 90.5 103 46.6
FAN14G5098 Fragaria x ananassa HOM05D003390 ORTHO05D004189 1.1e-14 84.0 91 53.8
Nn4g26479 Nelumbo nucifera HOM05D003390 ORTHO05D004189 2.2e-12 76.3 49 69.4
PSO541G3465 Papaver somniferum HOM05D003390 ORTHO05D004189 4.9e-12 75.1 68 54.4
TPR.G31585 Trifolium pratense HOM05D003390 ORTHO05D004189 2.7e-10 69.3 56 64.3
Gohir.D09G006300 Gossypium hirsutum HOM05D003390 ORTHO05D004189 1.1e-08 63.9 40 70.0
MD17G1138500 Malus domestica HOM05D003390 ORTHO05D004189 7.3e-08 61.2 62 56.5


User provided reference genes

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