Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 1.9e-65 252.3 122 100.0
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 4.0e-39 164.9 122 68.9
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 2.4e-36 155.6 110 70.0
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 2.4e-36 155.6 110 70.9
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 1.6e-35 152.9 121 65.3
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 3.5e-35 151.8 119 63.9
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.0e-34 150.2 114 62.3
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 3.0e-34 148.7 109 67.0
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 5.1e-34 147.9 115 64.3
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.5e-33 146.4 125 61.6
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 2.5e-33 145.6 110 69.1
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 3.3e-33 145.2 112 64.3
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 1.2e-32 143.3 107 65.4
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 1.1e-31 140.2 102 69.6
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.4e-31 139.0 107 63.6
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 4.0e-31 138.3 108 66.7
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 6.8e-31 137.5 88 68.2
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 8.9e-31 137.1 104 63.5
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 8.9e-31 137.1 96 64.6
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 8.9e-31 137.1 111 62.2
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.5e-30 136.3 73 83.6
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.5e-30 136.3 114 60.5
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 2.6e-30 135.6 111 61.3
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 2.6e-30 135.6 107 63.6
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 4.4e-30 134.8 115 59.1
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 5.8e-30 134.4 111 60.4
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.8e-30 134.4 104 64.4
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 7.6e-30 134.0 104 64.4
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 9.9e-30 133.7 120 60.0
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 1.7e-29 132.9 116 57.8
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 1.7e-29 132.9 89 65.2
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 3.8e-29 131.7 89 71.9
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 4.9e-29 131.3 104 62.5
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 4.9e-29 131.3 120 55.8
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 6.4e-29 131.0 102 61.8
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 1.4e-28 129.8 110 58.2
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 2.4e-28 129.0 103 65.0
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 3.2e-28 128.6 110 58.2
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 3.2e-28 128.6 102 60.8
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 4.2e-28 128.3 111 62.2
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.2e-28 128.3 85 69.4
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 4.2e-28 128.3 109 62.4
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 4.2e-28 128.3 104 59.6
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 5.4e-28 127.9 104 59.6
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 5.4e-28 127.9 109 59.6
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 9.3e-28 127.1 107 60.7
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 9.3e-28 127.1 67 80.6
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 9.3e-28 127.1 67 80.6
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 1.2e-27 126.7 112 59.8
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.6e-27 126.3 96 65.6
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 1.6e-27 126.3 102 61.8
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 2.1e-27 125.9 107 60.7
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 2.7e-27 125.6 106 58.5
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 2.7e-27 125.6 70 80.0
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 3.5e-27 125.2 101 64.4
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 3.5e-27 125.2 86 65.1
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 3.5e-27 125.2 109 60.6
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 4.6e-27 124.8 96 64.6
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 6.0e-27 124.4 106 56.6
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.7e-26 122.9 85 64.7
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.7e-26 122.9 91 68.1
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.7e-26 122.9 91 68.1
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 2.3e-26 122.5 83 67.5
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 2.3e-26 122.5 103 60.2
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 3.9e-26 121.7 112 58.0
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 3.9e-26 121.7 99 61.6
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 3.9e-26 121.7 118 55.9
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 5.1e-26 121.3 111 58.6
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 5.1e-26 121.3 118 56.8
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 5.1e-26 121.3 105 61.0
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 6.6e-26 120.9 103 62.1
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 8.7e-26 120.6 102 60.8
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 8.7e-26 120.6 115 53.9
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 1.1e-25 120.2 110 58.2
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 1.1e-25 120.2 66 80.3
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 2.5e-25 119.0 115 54.8
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 4.3e-25 118.2 66 75.8
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 4.3e-25 118.2 129 49.6
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 9.6e-25 117.1 102 56.9
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 1.3e-24 116.7 90 64.4
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 1.6e-24 116.3 80 66.2
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.6e-24 116.3 124 52.4
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 3.6e-24 115.2 91 61.5
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 3.6e-24 115.2 128 50.8
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 4.8e-24 114.8 65 80.0
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 4.8e-24 114.8 98 60.2
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 6.2e-24 114.4 118 51.7
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 8.1e-24 114.0 59 81.4
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 1.1e-23 113.6 108 58.3
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 6.9e-23 110.9 117 53.0
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 1.2e-22 110.2 96 57.3
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 3.4e-22 108.6 116 52.6
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 4.4e-22 108.2 92 59.8
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 9.9e-22 107.1 109 50.5
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 1.3e-21 106.7 78 64.1
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.3e-21 106.7 106 52.8
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 1.1e-20 103.6 97 54.6
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 1.9e-20 102.8 51 84.3
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 3.5e-19 98.6 62 66.1
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 8.7e-18 94.0 67 58.2
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 9.6e-17 90.5 88 51.1
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 2.1e-16 89.4 91 56.0
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 1.9e-12 76.3 79 46.8
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 6.9e-07 57.8 29 75.9


User provided reference genes

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