Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.2e-56 223.0 120 100.0
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 1.1e-49 199.9 120 89.2
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 4.6e-48 194.5 120 86.7
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 4.3e-46 188.0 121 85.1
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 9.7e-46 186.8 122 82.8
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.3e-45 186.4 123 82.1
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 6.3e-45 184.1 123 81.3
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.7e-42 176.0 123 80.5
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 5.3e-36 154.5 103 79.6
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 1.2e-35 153.3 103 79.6
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 2.0e-35 152.5 109 72.5
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 3.5e-35 151.8 114 71.9
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 1.7e-34 149.4 105 75.2
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.9e-34 148.7 103 76.7
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 3.8e-34 148.3 100 77.0
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 5.0e-34 147.9 114 71.9
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.4e-33 146.4 104 76.9
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 2.5e-33 145.6 103 75.7
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 5.5e-33 144.4 95 78.9
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 5.5e-33 144.4 101 75.2
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 9.4e-33 143.7 106 71.7
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 1.6e-32 142.9 103 73.8
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.6e-32 142.9 114 71.1
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 2.7e-32 142.1 106 70.8
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 2.7e-32 142.1 109 70.6
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 2.7e-32 142.1 110 72.7
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 3.6e-32 141.7 105 70.5
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 4.7e-32 141.4 109 67.9
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 8.0e-32 140.6 101 70.3
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.0e-31 140.2 109 69.7
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.0e-31 140.2 105 69.5
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.4e-31 139.8 109 72.5
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.4e-31 139.8 109 69.7
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.8e-31 139.4 106 70.8
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 2.3e-31 139.0 93 77.4
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 2.3e-31 139.0 93 77.4
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.3e-31 139.0 105 68.6
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 2.3e-31 139.0 94 76.6
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 2.3e-31 139.0 107 67.3
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 3.9e-31 138.3 101 75.2
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 6.7e-31 137.5 106 68.9
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 8.8e-31 137.1 111 66.7
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.5e-30 136.3 105 67.6
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 2.0e-30 136.0 101 72.3
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 3.3e-30 135.2 105 65.7
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 4.4e-30 134.8 101 73.3
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 4.4e-30 134.8 105 66.7
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 7.4e-30 134.0 107 67.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 9.7e-30 133.7 101 70.3
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 1.3e-29 133.3 93 76.3
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.7e-29 132.9 107 68.2
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 1.7e-29 132.9 110 65.5
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 3.7e-29 131.7 109 68.8
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 1.1e-28 130.2 103 67.0
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.1e-28 130.2 103 71.8
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 3.1e-28 128.6 100 65.0
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 3.1e-28 128.6 95 68.4
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 3.1e-28 128.6 109 65.1
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 3.1e-28 128.6 104 62.5
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 3.1e-28 128.6 99 68.7
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 2.6e-27 125.6 102 62.7
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 4.5e-27 124.8 101 68.3
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 4.5e-27 124.8 105 67.6
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 4.5e-27 124.8 104 63.5
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 5.9e-27 124.4 107 67.3
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 7.7e-27 124.0 98 68.4
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.3e-26 123.2 105 66.7
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.7e-26 122.9 102 59.8
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 5.0e-26 121.3 102 58.8
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 5.0e-26 121.3 103 66.0
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 6.5e-26 120.9 103 67.0
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 8.5e-26 120.6 91 69.2
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.1e-25 120.2 82 79.3
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.5e-25 119.8 101 64.4
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 1.9e-25 119.4 101 63.4
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 2.5e-25 119.0 107 59.8
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 4.2e-25 118.2 101 62.4
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 4.2e-25 118.2 101 62.4
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 4.2e-25 118.2 101 62.4
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 2.1e-24 115.9 113 56.6
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 4.7e-24 114.8 109 57.8
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 4.7e-24 114.8 80 77.5
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.8e-23 112.8 102 60.8
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 4.4e-22 108.2 119 53.8
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 9.7e-22 107.1 128 46.9
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.3e-21 106.7 104 54.8
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 2.2e-21 105.9 153 48.4
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 8.3e-21 104.0 95 64.2
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 1.4e-20 103.2 77 74.0
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 1.4e-20 103.2 80 68.8
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 2.0e-19 99.4 104 56.7
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.0e-18 97.1 94 50.0
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 1.0e-18 97.1 101 51.5
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 2.2e-18 95.9 69 71.0
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 3.2e-17 92.0 80 55.0
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 9.4e-17 90.5 83 63.9
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 9.4e-17 90.5 90 54.4
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.2e-16 90.1 66 71.2
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 2.8e-13 79.0 112 43.8
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 3.7e-13 78.6 91 48.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 8.3e-13 77.4 125 37.6
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.2e-11 73.6 75 52.0
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 8.0e-08 60.8 94 40.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 6.8e-07 57.8 65 52.3
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 7.5e-06 54.3 50 52.0


User provided reference genes

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