Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 1.3e-79 299.7 151 100.0
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 6.9e-57 224.2 146 80.8
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 1.0e-52 210.3 148 75.0
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.6e-50 203.0 148 71.6
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 1.8e-49 199.5 148 70.9
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 1.4e-46 189.9 146 68.5
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 3.5e-45 185.3 146 68.5
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 4.6e-45 184.9 140 70.0
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 4.6e-45 184.9 146 67.8
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 2.3e-44 182.6 140 69.3
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 5.1e-44 181.4 140 68.6
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.1e-43 180.3 146 67.8
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.1e-43 180.3 146 69.2
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 2.5e-43 179.1 146 67.8
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.3e-43 178.7 151 64.9
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 1.6e-42 176.4 146 65.1
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 2.8e-42 175.6 139 65.5
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 3.7e-42 175.3 136 69.9
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.4e-41 173.3 146 61.6
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 1.4e-41 173.3 146 64.4
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 1.4e-41 173.3 146 63.0
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 1.4e-41 173.3 149 64.4
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 3.1e-41 172.2 146 65.8
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.1e-41 171.8 140 68.6
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 5.3e-41 171.4 150 63.3
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 5.3e-41 171.4 134 68.7
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 6.9e-41 171.0 151 64.2
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 1.5e-40 169.9 145 63.4
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 3.4e-40 168.7 146 63.7
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 7.6e-40 167.5 146 63.0
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 1.0e-39 167.2 148 65.5
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 1.7e-39 166.4 87 92.0
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 1.1e-38 163.7 139 65.5
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 1.1e-38 163.7 119 71.4
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 1.9e-38 162.9 139 65.5
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.9e-38 162.9 148 62.2
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 2.5e-38 162.5 148 61.5
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 3.2e-38 162.2 150 60.7
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 3.2e-38 162.2 132 68.2
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 3.2e-38 162.2 146 61.0
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 7.2e-38 161.0 134 64.9
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 7.2e-38 161.0 148 61.5
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 1.2e-37 160.2 151 58.9
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 2.1e-37 159.5 107 75.7
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 2.7e-37 159.1 115 73.9
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 3.6e-37 158.7 134 64.9
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 3.6e-37 158.7 144 61.8
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 7.9e-37 157.5 142 59.2
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 1.0e-36 157.1 83 90.4
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 1.8e-36 156.4 110 76.4
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 1.8e-36 156.4 83 89.2
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 2.3e-36 156.0 155 57.4
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 3.0e-36 155.6 143 59.4
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 3.9e-36 155.2 83 88.0
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 6.7e-36 154.5 143 58.0
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 6.7e-36 154.5 155 57.4
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 1.1e-35 153.7 142 59.2
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 1.5e-35 153.3 145 57.2
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 1.9e-35 152.9 152 59.2
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.5e-35 152.5 159 57.2
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 2.5e-35 152.5 159 57.2
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.5e-35 152.5 107 72.9
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 3.3e-35 152.1 151 57.6
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 5.7e-35 151.4 103 74.8
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 7.4e-35 151.0 104 72.1
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 9.7e-35 150.6 98 74.5
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 9.7e-35 150.6 104 72.1
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 9.7e-35 150.6 110 73.6
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.3e-34 150.2 95 77.9
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 1.3e-34 150.2 95 77.9
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 1.6e-34 149.8 96 75.0
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 1.6e-34 149.8 96 75.0
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 2.8e-34 149.1 136 57.4
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 4.8e-34 148.3 141 57.4
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 4.8e-34 148.3 98 73.5
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 6.3e-34 147.9 146 54.1
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 6.3e-34 147.9 104 71.2
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 6.3e-34 147.9 85 83.5
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 6.3e-34 147.9 80 90.0
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 8.2e-34 147.5 147 54.4
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 8.2e-34 147.5 147 54.4
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 8.2e-34 147.5 147 54.4
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 8.2e-34 147.5 91 79.1
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 1.1e-33 147.1 79 87.3
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 1.4e-33 146.7 148 54.1
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 1.8e-33 146.4 137 58.4
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 1.8e-33 146.4 89 76.4
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 2.4e-33 146.0 79 87.3
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 4.1e-33 145.2 104 71.2
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.5e-32 143.3 91 74.7
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 5.9e-32 141.4 112 68.8
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 7.2e-30 134.4 103 67.0
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 3.0e-28 129.0 70 84.3
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 3.9e-28 128.6 109 57.8
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 2.2e-26 122.9 102 58.8
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 2.8e-26 122.5 66 86.4
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 8.2e-26 120.9 126 56.3
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.1e-25 118.6 145 53.1
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 5.3e-25 118.2 79 69.6
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 9.1e-25 117.5 89 64.0
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 1.8e-20 103.2 79 77.2
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 3.0e-20 102.4 119 53.8
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 5.2e-20 101.7 76 63.2
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 6.7e-20 101.3 80 70.0
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 2.6e-19 99.4 51 90.2


User provided reference genes

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