Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G026400 Prunus persica HOM05D004835 ORTHO05D006046 5.8e-228 793.9 401 100.0
MD05G1340900 Malus domestica HOM05D004835 ORTHO05D006046 3.3e-191 671.8 407 84.8
RcHm_v2.0_Chr5g0004011 Rosa chinensis HOM05D004835 ORTHO05D006046 2.6e-172 609.0 402 78.4
FAN25G1333 Fragaria x ananassa HOM05D004835 ORTHO05D006046 3.0e-168 595.5 402 76.6
Hma1.2p1_0091F.1_g046150 Hydrangea macrophylla HOM05D004835 ORTHO05D006046 6.7e-168 594.3 408 75.0
CiPaw.10G068200 Carya illinoinensis HOM05D004835 ORTHO05D006046 1.1e-167 593.6 401 76.1
Potri.004G022900 Populus trichocarpa HOM05D004835 ORTHO05D006046 4.4e-167 591.7 404 76.7
FvH4_3g02680 Fragaria vesca HOM05D004835 ORTHO05D006046 1.3e-166 590.1 402 75.9
Manes.16G012700 Manihot esculenta HOM05D004835 ORTHO05D006046 1.4e-165 586.6 410 73.7
Haze_06737 Corylus avellana HOM05D004835 ORTHO05D006046 1.0e-163 580.5 431 71.0
QL05p075217 Quercus lobata HOM05D004835 ORTHO05D006046 1.7e-163 579.7 400 74.0
TWI63G0472 Tripterygium wilfordii HOM05D004835 ORTHO05D006046 1.7e-163 579.7 407 74.4
Sabra04G0012600 Salix brachista HOM05D004835 ORTHO05D006046 6.5e-163 577.8 406 74.9
Atru.chr10.2145 Acer truncatum HOM05D004835 ORTHO05D006046 1.9e-162 576.2 406 74.6
Cfa000278 Carpinus fangiana HOM05D004835 ORTHO05D006046 2.5e-162 575.9 431 70.8
Haze_06733 Corylus avellana HOM05D004835 ORTHO05D006046 7.2e-162 574.3 390 75.6
Ciclev10015558m.g Citrus clementina HOM05D004835 ORTHO05D006046 1.6e-161 573.2 403 74.4
Thecc.06G213800 Theobroma cacao HOM05D004835 ORTHO05D006046 2.1e-161 572.8 372 79.3
PGR004G0955 Punica granatum HOM05D004835 ORTHO05D006046 3.0e-160 568.9 404 73.3
Lj1A1224G37 Lonicera japonica HOM05D004835 ORTHO05D006046 6.7e-160 567.8 399 74.2
TAR626G1121 Trochodendron aralioides HOM05D004835 ORTHO05D006046 2.6e-159 565.8 410 72.0
Eucgr.D00815 Eucalyptus grandis HOM05D004835 ORTHO05D006046 4.4e-159 565.1 408 73.0
ClCG03G004990 Citrullus lanatus HOM05D004835 ORTHO05D006046 5.7e-159 564.7 401 73.3
MELO3C002484.2 Cucumis melo HOM05D004835 ORTHO05D006046 3.7e-158 562.0 409 71.9
Actinidia26949 Actinidia chinensis HOM05D004835 ORTHO05D006046 1.4e-157 560.1 406 71.2
COL.COLO4_31722 Corchorus olitorius HOM05D004835 ORTHO05D006046 5.3e-157 558.1 375 76.3
Gohir.A06G145700 Gossypium hirsutum HOM05D004835 ORTHO05D006046 1.6e-156 556.6 374 76.2
Gorai.010G176900 Gossypium raimondii HOM05D004835 ORTHO05D006046 1.6e-156 556.6 373 76.1
CsaV3_1G011070 Cucumis sativus L. HOM05D004835 ORTHO05D006046 1.3e-155 553.5 372 75.8
CANSAT56G3094 Cannabis sativa HOM05D004835 ORTHO05D006046 5.0e-155 551.6 387 74.9
Rhsim13G0157800 Rhododendron simsii HOM05D004835 ORTHO05D006046 8.5e-155 550.8 408 70.6
vmacro03709 Vaccinium macrocarpon HOM05D004835 ORTHO05D006046 8.5e-155 550.8 405 70.4
Lsat_1_v5_gn_7_16981 Lactuca sativa HOM05D004835 ORTHO05D006046 1.5e-154 550.1 410 72.7
ECA236G4143 Erigeron canadensis HOM05D004835 ORTHO05D006046 1.0e-152 543.9 405 70.4
Nn1g07024 Nelumbo nucifera HOM05D004835 ORTHO05D006046 3.0e-152 542.3 370 74.3
Sed0001374 Sechium edule HOM05D004835 ORTHO05D006046 6.8e-152 541.2 433 68.1
CSS0008490 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 2.0e-151 539.7 411 69.8
HanXRQChr05g0130051 Helianthus annuus HOM05D004835 ORTHO05D006046 2.2e-150 536.2 408 68.6
Lj5g0006944 Lotus japonicus HOM05D004835 ORTHO05D006046 1.8e-149 533.1 396 68.7
MBI02_g10099_MAGBIO Magnolia biondii HOM05D004835 ORTHO05D006046 4.1e-149 531.9 393 71.0
Glyma.20G141100 Glycine max HOM05D004835 ORTHO05D006046 5.4e-149 531.6 367 72.8
DCAR_008123 Daucus carota HOM05D004835 ORTHO05D006046 1.2e-148 530.4 401 68.8
Gohir.D06G151600 Gossypium hirsutum HOM05D004835 ORTHO05D006046 2.7e-148 529.3 373 73.7
Duzib235G1297 Durio zibethinus HOM05D004835 ORTHO05D006046 1.7e-147 526.6 373 74.5
Glyma.10G252300 Glycine max HOM05D004835 ORTHO05D006046 1.1e-146 523.9 367 71.9
Aqoxy4G01996 Aquilegia oxysepala HOM05D004835 ORTHO05D006046 2.5e-146 522.7 369 73.4
Cpa.g.sc198.3 Carica papaya HOM05D004835 ORTHO05D006046 2.5e-146 522.7 408 66.4
PSO675G0743 Papaver somniferum HOM05D004835 ORTHO05D006046 4.2e-146 521.9 408 68.6
Oeu030985.2 Olea europaea HOM05D004835 ORTHO05D006046 1.6e-145 520.0 439 63.3
Solyc10g005370.3 Solanum lycopersicum HOM05D004835 ORTHO05D006046 2.1e-145 519.6 403 67.2
Nitab4.5_0003738g0050 Nicotiana tabacum HOM05D004835 ORTHO05D006046 2.7e-145 519.2 402 68.7
Lalb_Chr02g0144591 Lupinus albus HOM05D004835 ORTHO05D006046 4.7e-145 518.5 373 70.8
Dinv17835 Davidia involucrata HOM05D004835 ORTHO05D006046 8.0e-145 517.7 287 87.8
Sopen10g001360 Solanum pennellii HOM05D004835 ORTHO05D006046 8.0e-145 517.7 403 67.2
arahy.Tifrunner.gnm1.ann1.P6UBAG Arachis hypogaea HOM05D004835 ORTHO05D006046 1.4e-144 516.9 378 69.8
GSVIVG01012626001 Vitis vinifera HOM05D004835 ORTHO05D006046 1.4e-144 516.9 287 87.1
Psat6g210360 Pisum sativum HOM05D004835 ORTHO05D006046 2.3e-144 516.2 386 70.5
Nitab4.5_0006795g0010 Nicotiana tabacum HOM05D004835 ORTHO05D006046 1.2e-143 513.8 402 67.9
VMungo0720G3178 Vigna mungo HOM05D004835 ORTHO05D006046 1.5e-143 513.5 367 70.6
Hund21377 Selenicereus undatus HOM05D004835 ORTHO05D006046 2.0e-143 513.1 359 71.6
arahy.Tifrunner.gnm1.ann1.06HJR7 Arachis hypogaea HOM05D004835 ORTHO05D006046 5.7e-143 511.5 378 69.0
Ca_10985_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 9.8e-143 510.8 381 69.8
Ca_11005_v3 Cicer arietinum L. HOM05D004835 ORTHO05D006046 9.8e-143 510.8 381 69.8
MSTRG.13160 Avicennia marina HOM05D004835 ORTHO05D006046 1.3e-142 510.4 425 64.9
EL10Ac8g19899 Beta vulgaris HOM05D004835 ORTHO05D006046 1.3e-142 510.4 395 67.3
Medtr1g105545 Medicago truncatula HOM05D004835 ORTHO05D006046 4.9e-142 508.4 371 70.9
Phvul.007G051900 Phaseolus vulgaris HOM05D004835 ORTHO05D006046 8.3e-142 507.7 395 67.3
PGSC0003DMG400011280 Solanum tuberosum HOM05D004835 ORTHO05D006046 1.8e-141 506.5 366 70.2
ATR0762G046 Amborella trichopoda HOM05D004835 ORTHO05D006046 7.0e-141 504.6 360 70.0
PSO541G2305 Papaver somniferum HOM05D004835 ORTHO05D006046 2.5e-138 496.1 377 70.3
Migut.H01551 Erythranthe guttata HOM05D004835 ORTHO05D006046 4.3e-138 495.4 422 63.0
THA.LOC104812524 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 9.5e-138 494.2 403 65.8
CDE05G0674 Ceratophyllum demersum HOM05D004835 ORTHO05D006046 2.1e-137 493.0 371 66.6
Cc00_g17920 Coffea canephora HOM05D004835 ORTHO05D006046 4.7e-137 491.9 287 82.2
AUR62022016 Chenopodium quinoa HOM05D004835 ORTHO05D006046 1.8e-136 490.0 370 68.9
Os07g0530600 Oryza sativa ssp. japonica HOM05D004835 ORTHO05D006046 4.0e-136 488.8 376 66.0
Ah.09g235350 Amaranthus hybridus HOM05D004835 ORTHO05D006046 6.8e-136 488.0 384 65.4
HPP92_010092 Vanilla planifolia HOM05D004835 ORTHO05D006046 8.9e-136 487.6 379 66.5
SalBow1G4699 Salvia bowleyana HOM05D004835 ORTHO05D006046 1.5e-135 486.9 341 73.3
unitig_26.g9396 Utricularia gibba HOM05D004835 ORTHO05D006046 4.4e-135 485.3 412 62.9
CAN.G105.1 Capsicum annuum HOM05D004835 ORTHO05D006046 4.9e-134 481.9 412 62.6
Sc05g0008870 Simmondsia chinensis HOM05D004835 ORTHO05D006046 6.4e-134 481.5 367 66.5
Zm00001eb106240 Zea mays HOM05D004835 ORTHO05D006046 7.0e-133 478.0 398 63.1
MSTRG.14649 Avicennia marina HOM05D004835 ORTHO05D006046 1.2e-132 477.2 422 61.4
Zm00001eb323140 Zea mays HOM05D004835 ORTHO05D006046 1.2e-132 477.2 392 62.2
SGA_v2.0_scaffold49G18268 Striga asiatica HOM05D004835 ORTHO05D006046 1.6e-132 476.9 428 60.3
ECA248G0073 Erigeron canadensis HOM05D004835 ORTHO05D006046 4.6e-132 475.3 361 67.0
unitig_749.g13624 Utricularia gibba HOM05D004835 ORTHO05D006046 5.9e-132 474.9 365 66.0
THA.LOC104821035 Tarenaya hassleriana HOM05D004835 ORTHO05D006046 7.8e-132 474.6 379 66.2
Lsat_1_v5_gn_1_125320 Lactuca sativa HOM05D004835 ORTHO05D006046 2.3e-131 473.0 376 67.0
AL7G32900 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 2.1e-129 466.5 403 61.5
AT4G21210 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 4.7e-129 465.3 376 64.4
HanXRQChr01g0002521 Helianthus annuus HOM05D004835 ORTHO05D006046 1.5e-127 460.3 375 64.3
Carub.0007s2021 Capsella rubella HOM05D004835 ORTHO05D006046 5.8e-127 458.4 374 62.8
CARHR227800 Cardamine hirsuta HOM05D004835 ORTHO05D006046 5.8e-127 458.4 402 60.0
Lj2A274G58 Lonicera japonica HOM05D004835 ORTHO05D006046 1.3e-126 457.2 396 64.1
Thhalv10025354m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 6.4e-126 454.9 377 63.1
Peaxi162Scf00678g00310 Petunia axillaris HOM05D004835 ORTHO05D006046 6.4e-126 454.9 402 62.2
Sp7g19300 Schrenkiella parvula HOM05D004835 ORTHO05D006046 1.1e-125 454.1 374 62.8
BcaNung03833 Brassica carinata HOM05D004835 ORTHO05D006046 3.5e-124 449.1 363 64.5
BraA01t01201Z Brassica rapa HOM05D004835 ORTHO05D006046 1.3e-123 447.2 362 64.6
Cpa.g.sc198.4 Carica papaya HOM05D004835 ORTHO05D006046 1.1e-122 444.1 287 77.7
C01p15150 Brassica napus HOM05D004835 ORTHO05D006046 1.9e-122 443.4 358 64.2
BolC1t01464H Brassica oleracea HOM05D004835 ORTHO05D006046 1.9e-122 443.4 358 64.2
A01p12580 Brassica napus HOM05D004835 ORTHO05D006046 2.5e-122 443.0 362 64.4
Aa31LG6G3230 Aethionema arabicum HOM05D004835 ORTHO05D006046 7.3e-122 441.4 408 59.3
BcaC09g51244 Brassica carinata HOM05D004835 ORTHO05D006046 3.6e-121 439.1 358 64.0
HPP92_010083 Vanilla planifolia HOM05D004835 ORTHO05D006046 6.2e-121 438.3 496 50.8
AT3G01200 Arabidopsis thaliana HOM05D004835 ORTHO05D006046 2.3e-120 436.4 381 62.2
AL3G11040 Arabidopsis lyrata HOM05D004835 ORTHO05D006046 1.2e-119 434.1 382 62.8
Sp3g00900 Schrenkiella parvula HOM05D004835 ORTHO05D006046 1.2e-119 434.1 373 63.3
Carub.0003s0094 Capsella rubella HOM05D004835 ORTHO05D006046 1.5e-119 433.7 374 62.6
Thhalv10020923m.g Eutrema salsugineum HOM05D004835 ORTHO05D006046 9.8e-119 431.0 375 65.3
Nn1g03640 Nelumbo nucifera HOM05D004835 ORTHO05D006046 9.8e-119 431.0 369 64.5
FAN21G1397 Fragaria x ananassa HOM05D004835 ORTHO05D006046 1.7e-118 430.3 287 76.3
Mapoly0141s0024 Marchantia polymorpha HOM05D004835 ORTHO05D006046 1.7e-118 430.3 365 60.5
Pp3c11_19190 Physcomitrium patens HOM05D004835 ORTHO05D006046 3.7e-118 429.1 373 57.4
CARHR075840 Cardamine hirsuta HOM05D004835 ORTHO05D006046 4.1e-117 425.6 354 64.1
Hund23515 Selenicereus undatus HOM05D004835 ORTHO05D006046 5.4e-117 425.2 369 62.3
BraA01t04644Z Brassica rapa HOM05D004835 ORTHO05D006046 1.6e-116 423.7 381 61.2
BNapus_Darmor_BZH_scaffold_113p00010 Brassica napus HOM05D004835 ORTHO05D006046 2.7e-116 422.9 381 60.9
BNapus_Darmor_BZH_scaffold_97p00190 Brassica napus HOM05D004835 ORTHO05D006046 1.0e-115 421.0 381 60.6
SEGI_26962 Sequoiadendron giganteum HOM05D004835 ORTHO05D006046 1.0e-115 421.0 369 59.3
BolC1t05939H Brassica oleracea HOM05D004835 ORTHO05D006046 4.3e-114 415.6 372 61.0
SMO147G0180 Selaginella moellendorffii HOM05D004835 ORTHO05D006046 5.6e-114 415.2 290 64.8
BcaC05g30485 Brassica carinata HOM05D004835 ORTHO05D006046 7.3e-114 414.8 367 61.9
BcaC09g47670 Brassica carinata HOM05D004835 ORTHO05D006046 6.2e-113 411.8 356 62.1
C09p75340 Brassica napus HOM05D004835 ORTHO05D006046 2.3e-112 409.8 368 62.5
BolC5t35125H Brassica oleracea HOM05D004835 ORTHO05D006046 2.3e-112 409.8 368 62.5
A05p44760 Brassica napus HOM05D004835 ORTHO05D006046 5.2e-112 408.7 367 61.0
BraA05t23181Z Brassica rapa HOM05D004835 ORTHO05D006046 5.2e-112 408.7 367 61.0
BcaC05g30395 Brassica carinata HOM05D004835 ORTHO05D006046 4.4e-111 405.6 368 62.0
BcaB04g21426 Brassica carinata HOM05D004835 ORTHO05D006046 7.6e-111 404.8 373 59.2
TPR.G5518 Trifolium pratense HOM05D004835 ORTHO05D006046 9.2e-109 397.9 384 58.9
CSS0001434 Camellia sinensis var. sinensis HOM05D004835 ORTHO05D006046 3.3e-106 389.4 326 66.9
AagrBONN_evm.TU.Sc2ySwM_368.2632 Anthoceros agrestis HOM05D004835 ORTHO05D006046 7.1e-101 371.7 347 55.6
CBR_g38977 Chara braunii HOM05D004835 ORTHO05D006046 8.1e-97 358.2 382 51.0
Aa31LG5G12420 Aethionema arabicum HOM05D004835 ORTHO05D006046 1.8e-91 340.5 260 68.1
Dinv20014 Davidia involucrata HOM05D004835 ORTHO05D006046 3.4e-87 326.2 196 80.6
Cre12.g514600 Chlamydomonas reinhardtii HOM05D004835 ORTHO05D006046 1.2e-60 238.0 297 41.8
BolC1t05935H Brassica oleracea HOM05D004835 ORTHO05D006046 6.9e-56 222.2 171 67.8
MCO14G521 Micromonas commoda HOM05D004835 ORTHO05D006046 3.8e-54 216.5 408 35.0
BNapus_Darmor_BZH_scaffold_97p00140 Brassica napus HOM05D004835 ORTHO05D006046 1.9e-53 214.2 160 68.8
MD10G1314400 Malus domestica HOM05D004835 ORTHO05D006046 2.5e-53 213.8 248 53.6
TPR.G4570 Trifolium pratense HOM05D004835 ORTHO05D006046 7.4e-50 202.2 258 46.5
BolC1t05929H Brassica oleracea HOM05D004835 ORTHO05D006046 2.7e-31 140.6 189 45.0
CANSAT64G1413 Cannabis sativa HOM05D004835 ORTHO05D006046 8.3e-25 119.0 173 43.9
Dinv20013 Davidia involucrata HOM05D004835 ORTHO05D006046 1.4e-24 118.2 72 76.4
Actinidia05534 Actinidia chinensis HOM05D000018 ORTHO05D001766 2.4e-24 117.5 108 59.3
Aa31LG5G12410 Aethionema arabicum HOM05D004835 ORTHO05D038187 4.5e-23 113.2 113 58.4
QL10p027838 Quercus lobata HOM05D004835 ORTHO05D337120 6.8e-19 99.4 113 51.3
Ca_29404_v3 Cicer arietinum L. HOM05D004835 ORTHO05D148401 1.3e-17 95.1 289 26.6
BolC5t35131H Brassica oleracea HOM05D004835 ORTHO05D038187 7.8e-15 85.9 56 71.4


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