Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 1.1e-193 679.9 346 100.0
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 4.7e-170 601.3 346 87.0
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 8.7e-156 553.9 340 82.9
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 4.6e-149 531.6 336 77.4
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 2.3e-148 529.3 347 77.2
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 5.6e-147 524.6 347 77.2
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 1.6e-141 506.5 346 75.4
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 3.3e-139 498.8 340 72.4
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 5.3e-137 491.5 334 71.9
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 1.2e-136 490.3 335 73.1
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 2.0e-136 489.6 346 70.8
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 5.9e-136 488.0 335 72.8
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 1.0e-135 487.3 337 72.4
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 8.5e-135 484.2 318 75.2
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 1.1e-134 483.8 344 69.2
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 4.2e-134 481.9 347 70.0
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 1.2e-133 480.3 346 69.1
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 2.7e-133 479.2 339 69.3
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 1.4e-132 476.9 340 71.5
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 3.0e-132 475.7 329 71.7
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 3.0e-132 475.7 339 67.6
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 3.9e-132 475.3 336 68.5
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 1.1e-131 473.8 338 68.6
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 4.3e-131 471.9 345 70.4
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.3e-130 470.3 342 69.6
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 2.8e-130 469.2 346 67.6
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 1.1e-129 467.2 346 65.3
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 2.4e-129 466.1 324 71.6
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 3.1e-129 465.7 336 68.2
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 5.3e-129 464.9 341 69.8
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.3e-127 460.3 340 69.7
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 3.8e-127 458.8 363 66.1
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 8.5e-127 457.6 340 67.4
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 3.2e-126 455.7 340 68.8
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.6e-125 453.4 341 66.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 4.7e-125 451.8 320 69.7
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 6.1e-125 451.4 322 71.4
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 6.1e-125 451.4 343 67.3
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.0e-123 446.4 318 71.1
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 2.0e-123 446.4 342 67.5
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 2.8e-122 442.6 345 66.7
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 4.8e-122 441.8 318 69.2
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 6.3e-122 441.4 350 66.3
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 2.4e-121 439.5 341 63.9
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 6.9e-121 438.0 349 64.8
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 6.9e-121 438.0 349 64.8
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.1e-121 437.6 337 66.8
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.5e-120 436.8 337 67.1
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.4e-120 435.6 316 70.9
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.9e-119 432.6 343 63.3
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.9e-119 432.6 345 63.8
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 5.0e-119 431.8 343 62.1
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 6.5e-119 431.4 343 61.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 1.1e-118 430.6 343 64.1
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 1.4e-118 430.3 346 64.7
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.4e-118 430.3 346 64.7
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 9.4e-118 427.6 342 64.0
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.2e-117 427.2 314 66.2
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.7e-117 426.0 343 62.7
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 2.7e-117 426.0 320 66.2
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 4.7e-117 425.2 314 65.9
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 6.1e-117 424.9 341 63.6
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.0e-116 424.1 344 61.9
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 1.4e-116 423.7 337 62.9
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 2.3e-116 422.9 345 61.2
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 6.7e-116 421.4 346 62.7
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 6.7e-116 421.4 346 62.7
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 6.7e-116 421.4 346 62.7
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 8.8e-116 421.0 343 63.6
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 8.8e-116 421.0 343 63.6
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 1.1e-115 420.6 337 62.6
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 1.5e-115 420.2 344 62.5
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 1.5e-115 420.2 344 62.5
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 2.0e-115 419.9 343 63.3
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 2.0e-115 419.9 343 62.1
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 1.7e-114 416.8 344 61.0
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 4.8e-114 415.2 345 62.6
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 1.4e-113 413.7 341 62.8
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 4.1e-113 412.1 344 62.8
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 1.2e-112 410.6 338 58.9
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-112 410.6 346 63.3
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 3.8e-111 405.6 342 63.2
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.1e-110 404.1 322 62.7
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 3.2e-110 402.5 337 63.2
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 2.7e-109 399.4 321 63.6
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 3.6e-109 399.1 323 62.2
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.1e-109 398.3 341 60.1
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 6.1e-109 398.3 341 60.1
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 4.0e-108 395.6 343 58.3
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.2e-108 395.2 323 61.3
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 8.8e-108 394.4 329 59.9
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 1.2e-107 394.0 323 61.3
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 4.4e-107 392.1 342 58.8
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.2e-106 389.8 335 63.0
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.8e-106 389.4 339 58.7
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 9.1e-105 384.4 340 60.6
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 2.0e-104 383.3 257 70.8
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 2.7e-104 382.9 280 69.6
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 5.9e-104 381.7 334 59.6
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 1.3e-103 380.6 273 68.5
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 1.7e-103 380.2 342 57.9
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 5.2e-100 368.6 338 56.2
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 8.8e-100 367.9 328 59.5
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.6e-99 366.3 335 56.7
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 9.8e-99 364.4 340 58.2
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 2.2e-98 363.2 349 57.6
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 5.4e-97 358.6 337 55.5
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.4e-97 358.6 339 55.8
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 7.0e-97 358.2 335 55.8
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 2.7e-96 356.3 253 68.4
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 5.9e-96 355.1 273 68.1
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 5.9e-96 355.1 317 56.5
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 2.3e-92 343.2 336 54.5
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 5.2e-92 342.0 402 50.2
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 8.9e-92 341.3 319 51.7
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 6.3e-90 335.1 309 57.6
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 8.3e-90 334.7 315 57.8
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 1.1e-89 334.3 336 51.8
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.6e-88 330.5 331 54.1
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.5e-88 328.9 327 53.8
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.9e-88 328.6 322 49.7
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 2.9e-87 326.2 334 52.7
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 2.9e-87 326.2 327 53.5
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 6.6e-87 325.1 317 52.7
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 8.6e-87 324.7 326 53.4
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.3e-86 322.8 347 48.1
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.3e-86 322.8 337 50.7
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 7.3e-86 321.6 314 52.9
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 2.1e-85 320.1 337 50.4
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 6.1e-85 318.5 325 50.5
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 3.0e-84 316.2 333 48.3
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 4.0e-84 315.8 337 49.9
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 5.2e-84 315.5 266 59.8
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 9.8e-83 311.2 271 58.3
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 3.7e-82 309.3 324 49.1
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 4.9e-82 308.9 345 49.0
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 6.4e-82 308.5 325 48.9
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 6.4e-82 308.5 325 48.9
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 1.1e-81 307.8 324 49.1
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 4.1e-81 305.8 335 47.8
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 9.2e-81 304.7 347 48.4
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.6e-80 303.9 335 48.4
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 2.0e-80 303.5 275 57.1
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 1.1e-78 297.7 314 48.1
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 1.6e-77 293.9 189 73.5
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 4.0e-76 289.3 271 57.2
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.3e-74 284.3 211 65.4
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 1.4e-73 280.8 179 72.1
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.4e-73 280.8 191 69.6
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 4.1e-73 279.3 189 70.9
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 4.7e-69 265.8 325 44.3
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 6.8e-68 261.9 189 65.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.2e-67 261.2 189 65.6
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 5.4e-65 252.3 220 59.5
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 2.1e-61 240.4 182 65.4
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 3.4e-59 233.0 190 57.9
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 6.0e-56 222.2 184 59.8
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.9e-54 217.2 237 51.1
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 6.2e-53 212.2 158 66.5
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 3.1e-52 209.9 339 36.6
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 6.4e-50 202.2 228 52.2
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 8.1e-45 185.3 332 36.7
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 4.0e-36 156.4 172 49.4
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 4.9e-34 149.4 162 53.1
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 1.9e-33 147.5 167 51.5
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 5.5e-33 146.0 104 70.2
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 1.6e-29 134.4 77 89.6
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 8.2e-29 132.1 92 69.6
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 8.2e-29 132.1 76 82.9
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 1.4e-28 131.3 89 68.5
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 5.8e-27 125.9 95 64.2
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 2.7e-24 117.1 332 28.6
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 1.9e-22 110.9 81 59.3
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 2.5e-22 110.5 80 61.2
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 2.9e-18 97.1 75 66.7
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 4.3e-14 83.2 57 68.4
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 2.2e-13 80.9 54 66.7
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 3.7e-13 80.1 74 59.5
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 8.2e-13 79.0 66 62.1
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 3.1e-12 77.0 57 63.2
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 7.9e-08 62.4 70 44.3


User provided reference genes

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