Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.7e-154 549.3 277 100.0
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.8e-132 476.1 274 86.5
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.2e-126 456.8 274 83.2
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.3e-125 453.4 275 81.8
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.4e-124 449.9 275 81.1
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 5.4e-124 448.0 275 79.6
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.7e-123 445.7 274 79.9
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 5.0e-122 441.4 274 79.6
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 2.8e-120 435.6 274 77.7
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 8.0e-120 434.1 273 77.7
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 3.1e-119 432.2 274 78.5
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 3.1e-119 432.2 274 77.4
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 2.0e-118 429.5 274 77.4
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 3.4e-118 428.7 276 77.5
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 7.5e-118 427.6 274 75.9
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 4.9e-117 424.9 275 76.4
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 4.9e-117 424.9 274 76.6
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.1e-116 423.7 275 75.6
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.9e-116 422.9 274 75.5
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 4.1e-116 421.8 275 76.4
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.6e-115 419.9 274 77.4
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 2.0e-115 419.5 275 76.4
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 7.8e-115 417.5 275 74.9
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.0e-114 417.2 277 74.7
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.3e-114 416.8 274 74.8
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.3e-114 416.8 274 74.5
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.3e-114 416.0 276 73.2
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.3e-114 416.0 276 75.0
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.9e-114 415.2 276 75.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 5.0e-114 414.8 275 74.5
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 6.6e-114 414.5 275 74.9
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.1e-113 413.7 275 73.8
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.9e-113 412.9 276 74.6
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 3.3e-113 412.1 275 74.5
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 4.3e-113 411.8 277 73.6
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 5.6e-113 411.4 276 75.4
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 5.6e-113 411.4 274 74.1
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.1e-111 407.1 278 72.3
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.1e-111 407.1 278 72.3
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 2.3e-111 406.0 273 74.0
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.2e-110 403.7 276 73.6
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.5e-110 403.3 275 72.0
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 9.8e-110 400.6 303 69.3
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.3e-109 400.2 278 73.0
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.3e-109 400.2 274 72.6
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.3e-109 400.2 276 71.7
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 3.7e-109 398.7 275 72.4
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 3.7e-109 398.7 277 72.9
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.9e-108 396.4 273 72.2
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 1.9e-108 396.4 274 71.5
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.4e-108 396.0 275 69.8
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.4e-108 396.0 277 71.8
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 7.1e-108 394.4 274 70.8
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.2e-107 393.7 276 70.3
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.6e-107 393.3 277 72.6
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.1e-107 392.9 275 70.2
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 2.7e-107 392.5 274 71.5
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 3.5e-107 392.1 277 71.1
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 6.0e-107 391.3 282 68.4
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 6.0e-107 391.3 275 70.5
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 7.8e-107 391.0 275 70.2
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.0e-106 390.6 268 71.6
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.7e-106 389.8 275 69.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 2.3e-106 389.4 274 69.7
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 2.3e-106 389.4 274 70.4
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 2.3e-106 389.4 274 71.2
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.3e-106 389.4 277 69.7
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 3.9e-106 388.7 274 70.4
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.9e-106 388.7 274 71.9
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 2.5e-105 386.0 277 69.3
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 4.3e-105 385.2 275 69.8
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 4.3e-105 385.2 276 69.2
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 4.3e-105 385.2 274 71.2
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 5.6e-105 384.8 275 69.5
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 5.6e-105 384.8 275 69.5
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 2.1e-104 382.9 251 77.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 2.1e-104 382.9 276 68.5
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 2.1e-104 382.9 274 69.0
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 2.1e-104 382.9 277 71.1
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.6e-104 382.1 296 65.5
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 3.6e-104 382.1 275 68.7
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 3.6e-104 382.1 276 69.9
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 1.8e-103 379.8 277 70.8
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 2.3e-103 379.4 318 61.3
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 2.3e-103 379.4 275 66.5
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 4.0e-103 378.6 278 69.1
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 8.9e-103 377.5 275 68.7
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.2e-102 377.1 275 66.9
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.6e-102 375.9 276 69.2
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 5.8e-102 374.8 277 69.0
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 1.3e-101 373.6 278 68.3
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.7e-101 372.1 274 69.0
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.1e-100 370.5 252 73.0
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.1e-100 367.9 274 69.0
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.7e-98 363.2 277 67.5
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 3.9e-98 362.1 276 65.6
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 6.6e-98 361.3 278 67.3
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 2.8e-96 355.9 250 69.6
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 4.7e-96 355.1 252 69.8
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.1e-95 354.0 273 63.7
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.8e-95 353.2 277 62.5
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 3.1e-95 352.4 278 62.9
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.6e-94 349.4 280 63.6
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 8.4e-93 344.4 225 76.0
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.6e-91 340.1 267 63.7
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.4e-87 327.0 276 61.2
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 9.3e-84 314.3 229 66.4
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.3e-77 293.9 234 65.0
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.7e-77 293.5 271 56.8
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.3e-74 283.1 276 53.3
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 1.8e-71 273.5 224 62.9
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-63 247.3 271 52.0
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 8.5e-61 238.0 175 71.4
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 2.7e-59 233.0 272 47.4
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 6.1e-59 231.9 178 66.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 7.9e-59 231.5 242 55.0
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 7.9e-59 231.5 171 68.4
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.3e-56 224.2 226 51.8
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-55 221.1 240 55.0
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-53 214.2 209 58.9
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.5e-53 211.5 266 45.5
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 6.1e-51 205.3 180 63.9
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.9e-50 202.6 180 62.8
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 3.7e-48 196.1 365 35.1
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 6.9e-47 191.8 241 49.4
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 6.7e-42 175.3 277 40.8
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 2.0e-22 110.5 204 39.7
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 7.0e-15 85.5 49 81.6
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.5e-09 67.8 83 45.8
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.1e-07 61.6 35 82.9


User provided reference genes

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