Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G021600 Prunus persica HOM05D003074 ORTHO05D002434 1.6e-66 256.1 150 100.0
MD10G1320500 Malus domestica HOM05D003074 ORTHO05D002434 1.2e-29 133.7 153 52.9
MD05G1345200 Malus domestica HOM05D003074 ORTHO05D002434 7.6e-24 114.4 154 48.7
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 3.8e-15 85.5 152 49.3
FvH4_3g02220 Fragaria vesca HOM05D003074 ORTHO05D002434 8.5e-15 84.3 152 40.1
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 5.5e-14 81.6 155 41.3
FAN01G1682 Fragaria x ananassa HOM05D003074 ORTHO05D002434 5.5e-14 81.6 152 39.5
FAN08G3684 Fragaria x ananassa HOM05D003074 ORTHO05D002434 5.5e-14 81.6 152 39.5
FAN25G1645 Fragaria x ananassa HOM05D003074 ORTHO05D002434 5.5e-14 81.6 152 39.5
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 1.2e-13 80.5 149 41.6
FAN26G1625 Fragaria x ananassa HOM05D003074 ORTHO05D002434 2.1e-13 79.7 152 40.1
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 7.9e-13 77.8 150 38.0
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.8e-12 76.6 154 40.9
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.1e-11 73.9 152 42.1
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.5e-11 73.6 154 38.3
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.7e-11 71.6 148 35.1
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.7e-11 71.6 148 35.1
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 7.4e-11 71.2 66 59.1
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 3.7e-10 68.9 155 35.5
Gorai.009G178200 Gossypium raimondii HOM05D003074 ORTHO05D002434 3.7e-10 68.9 148 34.5
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 8.2e-10 67.8 148 36.5
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 8.2e-10 67.8 154 33.1
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 8.2e-10 67.8 149 34.9
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 1.4e-09 67.0 148 35.1
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.8e-09 66.6 148 33.1
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 1.8e-09 66.6 155 32.9
Gohir.A05G169900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.1e-09 65.9 148 33.8
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 5.3e-09 65.1 151 35.1
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 1.2e-08 63.9 148 33.1
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.2e-08 63.9 148 33.8
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 1.5e-08 63.5 63 52.4
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.5e-08 63.5 151 35.1
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 1.5e-08 63.5 150 38.7
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 2.6e-08 62.8 151 35.8
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 2.6e-08 62.8 151 43.0
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 3.4e-08 62.4 151 33.1
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 4.5e-08 62.0 149 34.9
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.5e-08 62.0 63 49.2
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 5.9e-08 61.6 152 32.2
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 5.9e-08 61.6 152 32.2
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 5.9e-08 61.6 148 32.4
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 7.7e-08 61.2 152 32.2
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 7.7e-08 61.2 152 32.2
Gohir.D05G173050 Gossypium hirsutum HOM05D003074 ORTHO05D002434 7.7e-08 61.2 148 33.1
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.0e-07 60.8 150 32.7
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 1.0e-07 60.8 153 34.0
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 1.3e-07 60.5 148 31.8
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.7e-07 60.1 149 32.9
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.7e-07 60.1 155 33.5
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 1.7e-07 60.1 158 33.5
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.7e-07 60.1 148 31.8
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 1.7e-07 60.1 152 32.9
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 2.9e-07 59.3 160 31.2
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 2.9e-07 59.3 148 31.1
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.9e-07 59.3 148 31.1
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 2.9e-07 59.3 151 33.8
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 5.0e-07 58.5 165 30.9
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 5.0e-07 58.5 63 46.0
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.0e-07 58.5 148 32.4
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 6.5e-07 58.2 148 28.4
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 6.5e-07 58.2 148 31.1
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 6.5e-07 58.2 96 42.7
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 6.5e-07 58.2 96 42.7
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 8.5e-07 57.8 67 49.3
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 8.5e-07 57.8 106 35.8
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 8.5e-07 57.8 148 31.1
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 8.5e-07 57.8 148 31.1
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 8.5e-07 57.8 148 31.1
Cpa.g.sc152.6 Carica papaya HOM05D003074 ORTHO05D002434 1.1e-06 57.4 61 50.8
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.1e-06 57.4 155 32.3
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.1e-06 57.4 148 31.1
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 1.1e-06 57.4 152 32.2
Aa31LG6G3910 Aethionema arabicum HOM05D003074 ORTHO05D002434 1.4e-06 57.0 63 46.0
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 1.9e-06 56.6 149 32.9
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 2.5e-06 56.2 102 43.1
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 3.2e-06 55.8 150 32.7
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 4.2e-06 55.5 152 34.9
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 4.2e-06 55.5 148 31.1
BcaNung00825 Brassica carinata HOM05D003074 ORTHO05D002434 5.5e-06 55.1 70 41.4
A03p53050 Brassica napus HOM05D003074 ORTHO05D002434 5.5e-06 55.1 70 41.4
C07p51480 Brassica napus HOM05D003074 ORTHO05D002434 5.5e-06 55.1 70 41.4
BolC7t45644H Brassica oleracea HOM05D003074 ORTHO05D002434 5.5e-06 55.1 70 41.4
BraA03t14377Z Brassica rapa HOM05D003074 ORTHO05D002434 5.5e-06 55.1 70 41.4
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 5.5e-06 55.1 154 31.2
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 5.5e-06 55.1 95 38.9
CsaV3_6G049100 Cucumis sativus L. HOM05D003074 ORTHO05D002434 5.5e-06 55.1 71 45.1
Thhalv10026602m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 5.5e-06 55.1 98 36.7
Gorai.010G252600 Gossypium raimondii HOM05D003074 ORTHO05D002434 5.5e-06 55.1 65 50.8
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 5.5e-06 55.1 63 46.0
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 7.2e-06 54.7 63 47.6
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 7.2e-06 54.7 148 29.7
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 9.4e-06 54.3 151 31.8
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 9.4e-06 54.3 67 50.7
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 9.4e-06 54.3 63 50.8
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 9.4e-06 54.3 67 52.2


User provided reference genes

Program Settings