Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G016000 Prunus persica HOM05D007052 ORTHO05D008871 2.5e-71 271.9 132 100.0
RcHm_v2.0_Chr5g0002341 Rosa chinensis HOM05D007052 ORTHO05D008871 4.6e-49 198.0 129 76.0
MD10G1325900 Malus domestica HOM05D007052 ORTHO05D008871 5.3e-45 184.5 131 74.8
Haze_06850 Corylus avellana HOM05D007052 ORTHO05D008871 1.2e-44 183.3 128 73.4
Cfa000169 Carpinus fangiana HOM05D007052 ORTHO05D008871 1.5e-44 183.0 128 74.2
MD05G1351600 Malus domestica HOM05D007052 ORTHO05D008871 3.4e-44 181.8 130 73.1
CiPaw.09G097200 Carya illinoinensis HOM05D007052 ORTHO05D008871 6.7e-40 167.5 125 71.2
Potri.011G010300 Populus trichocarpa HOM05D007052 ORTHO05D008871 1.9e-39 166.0 125 71.2
VMungo0540G2459 Vigna mungo HOM05D007052 ORTHO05D008871 1.9e-39 166.0 128 68.0
Lj1A1235T90 Lonicera japonica HOM05D007052 ORTHO05D008871 2.5e-39 165.6 128 68.8
Sabra11G0007900 Salix brachista HOM05D007052 ORTHO05D008871 2.2e-38 162.5 125 68.0
TAR627G0466 Trochodendron aralioides HOM05D007052 ORTHO05D008871 2.8e-38 162.2 125 67.2
GSVIVG01012660001 Vitis vinifera HOM05D007052 ORTHO05D008871 2.8e-38 162.2 130 65.4
Phvul.006G146300 Phaseolus vulgaris HOM05D007052 ORTHO05D008871 4.8e-38 161.4 128 64.8
Glyma.15G111400 Glycine max HOM05D007052 ORTHO05D008871 8.2e-38 160.6 128 64.8
Aqoxy1G03011 Aquilegia oxysepala HOM05D007052 ORTHO05D008871 1.1e-37 160.2 125 66.4
CsaV3_6G048750 Cucumis sativus L. HOM05D007052 ORTHO05D008871 1.8e-37 159.5 128 66.4
QL05p072067 Quercus lobata HOM05D007052 ORTHO05D008871 3.1e-37 158.7 145 61.4
Cc09_g01290 Coffea canephora HOM05D007052 ORTHO05D008871 4.1e-37 158.3 128 67.2
Atru.chr10.2273 Acer truncatum HOM05D007052 ORTHO05D008871 9.0e-37 157.1 124 64.5
TWI38G1879 Tripterygium wilfordii HOM05D007052 ORTHO05D008871 9.0e-37 157.1 129 65.9
Ca_00688_v3 Cicer arietinum L. HOM05D007052 ORTHO05D008871 1.2e-36 156.8 127 64.6
Rhsim02G0105300 Rhododendron simsii HOM05D007052 ORTHO05D008871 1.2e-36 156.8 139 61.9
vmacro15801 Vaccinium macrocarpon HOM05D007052 ORTHO05D008871 2.6e-36 155.6 137 62.8
Glyma.09G007000 Glycine max HOM05D007052 ORTHO05D008871 3.4e-36 155.2 128 64.1
Manes.17G028000 Manihot esculenta HOM05D007052 ORTHO05D008871 3.4e-36 155.2 129 62.0
Duzib235G0934 Durio zibethinus HOM05D007052 ORTHO05D008871 1.3e-35 153.3 127 62.2
EL10Ac8g20122 Beta vulgaris HOM05D007052 ORTHO05D008871 1.7e-35 152.9 128 64.1
Sc05g0009410 Simmondsia chinensis HOM05D007052 ORTHO05D008871 2.9e-35 152.1 102 73.5
CANSAT56G3240 Cannabis sativa HOM05D007052 ORTHO05D008871 3.8e-35 151.8 132 61.4
Eucgr.E03993 Eucalyptus grandis HOM05D007052 ORTHO05D008871 8.5e-35 150.6 126 61.1
Thecc.06G227100 Theobroma cacao HOM05D007052 ORTHO05D008871 1.9e-34 149.4 122 63.1
Dinv20100 Davidia involucrata HOM05D007052 ORTHO05D008871 2.5e-34 149.1 130 63.1
Gohir.A10G011300 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.5e-34 149.1 102 71.6
Gorai.011G012000 Gossypium raimondii HOM05D007052 ORTHO05D008871 2.5e-34 149.1 102 71.6
Gohir.D06G156800 Gossypium hirsutum HOM05D007052 ORTHO05D008871 3.2e-34 148.7 126 61.9
PGR042G3505 Punica granatum HOM05D007052 ORTHO05D008871 3.2e-34 148.7 87 80.5
Lj6g0012328 Lotus japonicus HOM05D007052 ORTHO05D008871 9.3e-34 147.1 125 60.0
arahy.Tifrunner.gnm1.ann1.LNF63F Arachis hypogaea HOM05D007052 ORTHO05D008871 1.2e-33 146.7 132 59.8
arahy.Tifrunner.gnm1.ann1.MS5PCD Arachis hypogaea HOM05D007052 ORTHO05D008871 1.2e-33 146.7 132 59.8
Lsat_1_v5_gn_1_129560 Lactuca sativa HOM05D007052 ORTHO05D008871 1.2e-33 146.7 125 60.8
Ciclev10016958m.g Citrus clementina HOM05D007052 ORTHO05D008871 1.6e-33 146.4 125 60.8
Psat1g177840 Pisum sativum HOM05D007052 ORTHO05D008871 1.6e-33 146.4 123 59.3
Gohir.A06G150600 Gossypium hirsutum HOM05D007052 ORTHO05D008871 2.3e-32 142.5 126 59.5
Medtr2g024300 Medicago truncatula HOM05D007052 ORTHO05D008871 2.3e-32 142.5 126 57.9
MELO3C007415.2 Cucumis melo HOM05D007052 ORTHO05D008871 3.9e-32 141.7 158 53.2
Sed0006602 Sechium edule HOM05D007052 ORTHO05D008871 3.9e-32 141.7 128 57.0
Actinidia11870 Actinidia chinensis HOM05D007052 ORTHO05D008871 5.7e-31 137.9 79 81.0
A09p26390 Brassica napus HOM05D007052 ORTHO05D008871 1.3e-30 136.7 129 57.4
C09p33580 Brassica napus HOM05D007052 ORTHO05D008871 1.3e-30 136.7 129 57.4
BolC9t56192H Brassica oleracea HOM05D007052 ORTHO05D008871 1.3e-30 136.7 129 57.4
BraA09t38213Z Brassica rapa HOM05D007052 ORTHO05D008871 1.3e-30 136.7 129 57.4
Lalb_Chr18g0056571 Lupinus albus HOM05D007052 ORTHO05D008871 1.7e-30 136.3 130 58.5
TPR.G13090 Trifolium pratense HOM05D007052 ORTHO05D008871 1.7e-30 136.3 126 57.1
Ah.09g234570 Amaranthus hybridus HOM05D007052 ORTHO05D008871 2.2e-30 136.0 130 57.7
ATR0624G054 Amborella trichopoda HOM05D007052 ORTHO05D008871 2.2e-30 136.0 103 64.1
BcaC04g21282 Brassica carinata HOM05D007052 ORTHO05D008871 2.2e-30 136.0 129 57.4
BcaB01g01799 Brassica carinata HOM05D007052 ORTHO05D008871 2.8e-30 135.6 128 57.0
PSO675G2240 Papaver somniferum HOM05D007052 ORTHO05D008871 2.8e-30 135.6 86 73.3
SalBow8G1921 Salvia bowleyana HOM05D007052 ORTHO05D008871 4.8e-30 134.8 116 58.6
SGA_v2.0_scaffold7G03781 Striga asiatica HOM05D007052 ORTHO05D008871 6.3e-30 134.4 127 56.7
CDE07G0375 Ceratophyllum demersum HOM05D000570 ORTHO05D001174 4.1e-29 131.7 104 61.5
Thhalv10029002m.g Eutrema salsugineum HOM05D007052 ORTHO05D008871 4.1e-29 131.7 123 58.5
Aa31LG9G9870 Aethionema arabicum HOM05D007052 ORTHO05D008871 5.3e-29 131.3 126 56.3
Sp6g04520 Schrenkiella parvula HOM05D007052 ORTHO05D008871 5.3e-29 131.3 129 56.6
THA.LOC104812978 Tarenaya hassleriana HOM05D007052 ORTHO05D008871 9.1e-29 130.6 127 55.9
AT4G04330 Arabidopsis thaliana HOM05D007052 ORTHO05D008871 2.0e-28 129.4 128 55.5
Carub.0006s3216 Capsella rubella HOM05D007052 ORTHO05D008871 2.0e-28 129.4 130 56.9
PSO541G4001 Papaver somniferum HOM05D007052 ORTHO05D008871 2.0e-28 129.4 117 60.7
ECA248G2484 Erigeron canadensis HOM05D007052 ORTHO05D008871 2.6e-28 129.0 79 77.2
Hund21433 Selenicereus undatus HOM05D007052 ORTHO05D008871 2.6e-28 129.0 134 53.7
CARHR253150 Cardamine hirsuta HOM05D007052 ORTHO05D008871 5.9e-28 127.9 91 68.1
Hund23440 Selenicereus undatus HOM05D007052 ORTHO05D008871 5.9e-28 127.9 75 78.7
HanXRQChr01g0006501 Helianthus annuus HOM05D007052 ORTHO05D008871 1.7e-27 126.3 125 52.8
DCAR_024989 Daucus carota HOM05D007052 ORTHO05D008871 2.2e-27 125.9 75 78.7
CSS0050367 Camellia sinensis var. sinensis HOM05D007052 ORTHO05D008871 2.9e-27 125.6 84 72.6
RcHm_v2.0_Chr7g0236991 Rosa chinensis HOM05D007052 ORTHO05D008871 3.8e-27 125.2 85 74.1
Sopen02g025730 Solanum pennellii HOM05D007052 ORTHO05D008871 3.8e-27 125.2 95 63.2
PGSC0003DMG400016462 Solanum tuberosum HOM05D007052 ORTHO05D008871 5.0e-27 124.8 92 66.3
AUR62012751 Chenopodium quinoa HOM05D007052 ORTHO05D008871 6.5e-27 124.4 130 54.6
AL6G47870 Arabidopsis lyrata HOM05D007052 ORTHO05D008871 1.1e-26 123.6 79 74.7
CAN.G1014.43 Capsicum annuum HOM05D007052 ORTHO05D008871 2.5e-26 122.5 87 67.8
FAN21G0414 Fragaria x ananassa HOM05D007052 ORTHO05D008871 2.5e-26 122.5 85 71.8
Os08g0425200 Oryza sativa ssp. japonica HOM05D007052 ORTHO05D008871 1.2e-25 120.2 92 64.1
Migut.M01374 Erythranthe guttata HOM05D007052 ORTHO05D008871 3.6e-25 118.6 95 63.2
Solyc02g081060.4 Solanum lycopersicum HOM05D007052 ORTHO05D008871 1.5e-23 113.2 79 69.6
Pp3c25_6660 Physcomitrium patens HOM05D007052 ORTHO05D008871 5.7e-23 111.3 80 67.5
Zm00001eb179210 Zea mays HOM05D007052 ORTHO05D008871 9.7e-23 110.5 134 53.0
COL.COLO4_31826 Corchorus olitorius HOM05D007052 ORTHO05D008871 1.3e-22 110.2 79 67.1
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 3.7e-22 108.6 84 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3173 Anthoceros agrestis HOM05D007052 ORTHO05D008871 8.2e-22 107.5 79 62.0
ClCG01G021710 Citrullus lanatus HOM05D007052 ORTHO05D008871 1.4e-21 106.7 103 56.3
Peaxi162Scf00178g00039 Petunia axillaris HOM05D007052 ORTHO05D008871 1.4e-21 106.7 75 69.3
SMO118G0387 Selaginella moellendorffii HOM05D007052 ORTHO05D008871 3.4e-20 102.1 77 59.7
arahy.Tifrunner.gnm1.ann1.ZUMJ7A Arachis hypogaea HOM05D007052 ORTHO05D008871 5.2e-16 88.2 70 61.4
AUR62021907 Chenopodium quinoa HOM05D007052 ORTHO05D008871 5.2e-16 88.2 131 42.7
Gorai.010G183200 Gossypium raimondii HOM05D007052 ORTHO05D008871 4.4e-15 85.1 118 48.3
Nn1g07250 Nelumbo nucifera HOM05D007052 ORTHO05D008871 4.5e-12 75.1 44 77.3
Nitab4.5_0001409g0190 Nicotiana tabacum HOM05D007052 ORTHO05D008871 2.5e-10 69.3 57 63.2
Cre07.g339000 Chlamydomonas reinhardtii HOM05D007052 ORTHO05D008871 1.5e-07 60.1 87 41.4
MSTRG.7177 Avicennia marina HOM05D007052 ORTHO05D008871 2.6e-07 59.3 45 57.8


User provided reference genes

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