Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G015100 Prunus persica HOM05D008262 ORTHO05D010389 5.7e-71 271.2 174 100.0
MD10G1326900 Malus domestica HOM05D008262 ORTHO05D010389 2.2e-38 162.9 174 61.5
Cfa000160 Carpinus fangiana HOM05D008262 ORTHO05D010389 2.1e-33 146.4 177 58.2
Dinv20108 Davidia involucrata HOM05D008262 ORTHO05D010389 1.0e-32 144.1 168 57.7
GSVIVG01004813001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.8e-29 133.3 168 54.2
RcHm_v2.0_Chr5g0002091 Rosa chinensis HOM05D008262 ORTHO05D010389 2.4e-29 132.9 177 63.8
Haze_06858 Corylus avellana HOM05D008262 ORTHO05D010389 3.1e-29 132.5 138 65.9
FAN08G2823 Fragaria x ananassa HOM05D008262 ORTHO05D010389 7.0e-29 131.3 135 74.8
FAN04G2856 Fragaria x ananassa HOM05D008262 ORTHO05D010389 5.9e-28 128.3 135 74.1
QL05p071877 Quercus lobata HOM05D008262 ORTHO05D010389 8.6e-27 124.4 174 54.0
CANSAT56G3510 Cannabis sativa HOM05D008262 ORTHO05D010389 4.2e-26 122.1 176 47.7
CANSAT56G4204 Cannabis sativa HOM05D008262 ORTHO05D010389 4.2e-26 122.1 176 47.7
FvH4_5g10500 Fragaria vesca HOM05D008262 ORTHO05D010389 5.5e-26 121.7 139 70.5
FAN18G3649 Fragaria x ananassa HOM05D008262 ORTHO05D010389 9.5e-26 120.9 139 70.5
FAN13G3130 Fragaria x ananassa HOM05D008262 ORTHO05D010389 1.2e-25 120.6 137 72.3
GSVIVG01004816001 Vitis vinifera HOM05D008262 ORTHO05D010389 1.2e-25 120.6 159 52.8
Hma1.2p1_1358F.1_g278000 Hydrangea macrophylla HOM05D008262 ORTHO05D010389 1.8e-24 116.7 172 50.0
Actinidia39261 Actinidia chinensis HOM05D008262 ORTHO05D010389 1.2e-23 114.0 172 48.8
TAR626G1083 Trochodendron aralioides HOM05D008262 ORTHO05D010389 6.3e-22 108.2 139 55.4
Thecc.06G228300 Theobroma cacao HOM05D008262 ORTHO05D010389 7.0e-21 104.8 164 47.0
Duzib160G0751 Durio zibethinus HOM05D008262 ORTHO05D010389 2.7e-20 102.8 161 47.8
Potri.004G004100 Populus trichocarpa HOM05D008262 ORTHO05D010389 8.6e-19 97.8 162 45.7
Nn1g07277 Nelumbo nucifera HOM05D008262 ORTHO05D010389 5.6e-18 95.1 128 50.8
Gohir.D06G157400 Gossypium hirsutum HOM05D008262 ORTHO05D010389 7.3e-18 94.7 168 42.9
Rhsim02G0104900 Rhododendron simsii HOM05D008262 ORTHO05D010389 7.3e-18 94.7 162 44.4
Potri.006G270200 Populus trichocarpa HOM05D008262 ORTHO05D010389 9.5e-18 94.4 174 43.7
Potri.011G011400 Populus trichocarpa HOM05D008262 ORTHO05D010389 9.5e-18 94.4 174 43.7
Gorai.010G183900 Gossypium raimondii HOM05D008262 ORTHO05D010389 2.8e-17 92.8 168 42.3
vmacro15804 Vaccinium macrocarpon HOM05D008262 ORTHO05D010389 3.6e-17 92.4 162 43.2
Gohir.A06G151200 Gossypium hirsutum HOM05D008262 ORTHO05D010389 1.0e-16 90.9 168 41.7
Cpa.g.c34179.2 Carica papaya HOM05D008262 ORTHO05D010389 5.2e-16 88.6 132 50.8
Ciclev10017034m.g Citrus clementina HOM05D008262 ORTHO05D010389 6.8e-16 88.2 163 41.1
Sed0027045 Sechium edule HOM05D008262 ORTHO05D010389 8.9e-16 87.8 174 40.2
CiPaw.09G098200 Carya illinoinensis HOM05D008262 ORTHO05D010389 3.4e-15 85.9 179 42.5
PSO210G6064 Papaver somniferum HOM05D008262 ORTHO05D010389 9.8e-15 84.3 158 38.0
ClCG01G021670 Citrullus lanatus HOM05D008262 ORTHO05D010389 2.9e-14 82.8 181 41.4
PSO832G2202 Papaver somniferum HOM05D008262 ORTHO05D010389 3.7e-14 82.4 159 37.7
Sabra11G0011600 Salix brachista HOM05D001288 ORTHO05D010389 4.9e-14 82.0 167 43.1
CsaV3_6G048720 Cucumis sativus L. HOM05D008262 ORTHO05D010389 9.2e-13 77.8 177 39.5
Sabra11G0010100 Salix brachista HOM05D008262 ORTHO05D010389 1.7e-11 73.6 135 45.9
Lsat_1_v5_gn_7_14921 Lactuca sativa HOM05D008262 ORTHO05D010389 8.6e-11 71.2 126 45.2
A01p13510 Brassica napus HOM05D008262 ORTHO05D010389 5.6e-10 68.6 125 41.6
BraA01t01292Z Brassica rapa HOM05D008262 ORTHO05D010389 5.6e-10 68.6 125 41.6
Eucgr.E03985 Eucalyptus grandis HOM05D008262 ORTHO05D010389 5.6e-10 68.6 174 44.3
C01p16340 Brassica napus HOM05D008262 ORTHO05D010389 9.5e-10 67.8 135 40.0
BolC1t01585H Brassica oleracea HOM05D008262 ORTHO05D010389 9.5e-10 67.8 135 40.0
AL7G31530 Arabidopsis lyrata HOM05D008262 ORTHO05D010389 1.6e-09 67.0 139 40.3
AT4G22160 Arabidopsis thaliana HOM05D008262 ORTHO05D010389 1.6e-09 67.0 139 38.1
MELO3C007418.2 Cucumis melo HOM05D008262 ORTHO05D010389 2.1e-09 66.6 180 37.8
BcaC09g51156 Brassica carinata HOM05D008262 ORTHO05D010389 3.6e-09 65.9 93 50.5
CARHR228990 Cardamine hirsuta HOM05D008262 ORTHO05D010389 8.0e-09 64.7 84 53.6
BcaNung03758 Brassica carinata HOM05D008262 ORTHO05D010389 1.1e-08 64.3 132 38.6
Carub.0007s1916 Capsella rubella HOM05D008262 ORTHO05D010389 1.4e-08 63.9 90 53.3
Thhalv10026500m.g Eutrema salsugineum HOM05D008262 ORTHO05D010389 3.1e-08 62.8 95 52.6
MBI05_g29353_MAGBIO Magnolia biondii HOM05D008262 ORTHO05D010389 1.2e-07 60.8 67 55.2
HanXRQChr15g0470801 Helianthus annuus HOM05D008262 ORTHO05D010389 1.3e-06 57.4 85 41.2
Sp7g20320 Schrenkiella parvula HOM05D008262 ORTHO05D010389 2.2e-06 56.6 145 37.2


User provided reference genes

Program Settings