Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G011500 Prunus persica HOM05D005126 ORTHO05D006169 0.0e+00 1102.0 579 100.0
Prupe.4G030200 Prunus persica HOM05D005126 ORTHO05D006169 8.7e-185 651.0 740 57.3
MD05G1335200 Malus domestica HOM05D005126 ORTHO05D006169 6.3e-159 565.1 749 51.7
MD10G1310700 Malus domestica HOM05D005126 ORTHO05D006169 3.4e-152 542.7 741 50.9
FvH4_3g03041 Fragaria vesca HOM05D005126 ORTHO05D006169 2.7e-146 523.1 739 49.0
RcHm_v2.0_Chr5g0004701 Rosa chinensis HOM05D005126 ORTHO05D006169 1.8e-145 520.4 738 49.2
FAN21G2838 Fragaria x ananassa HOM05D005126 ORTHO05D006169 2.3e-145 520.0 734 49.5
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 6.2e-130 468.8 748 46.5
QL05p077365 Quercus lobata HOM05D005126 ORTHO05D006169 8.9e-121 438.3 766 43.9
Thecc.06G207200 Theobroma cacao HOM05D005126 ORTHO05D006169 2.5e-115 420.2 744 43.8
Cfa000280 Carpinus fangiana HOM05D005126 ORTHO05D006169 9.5e-115 418.3 758 41.6
TAR624G1039 Trochodendron aralioides HOM05D005126 ORTHO05D006169 2.4e-110 403.7 769 41.9
Ciclev10007263m.g Citrus clementina HOM05D005126 ORTHO05D006169 2.1e-109 400.6 740 42.4
CANSAT35G0768 Cannabis sativa HOM05D005126 ORTHO05D006169 7.8e-109 398.7 722 41.8
CiPaw.09G152800 Carya illinoinensis HOM05D005126 ORTHO05D006169 1.0e-108 398.3 538 49.3
Dinv17855 Davidia involucrata HOM05D005126 ORTHO05D006169 1.3e-108 397.9 752 41.5
Haze_06662 Corylus avellana HOM05D005126 ORTHO05D006169 3.9e-108 396.4 805 39.6
Potri.011G032200 Populus trichocarpa HOM05D005126 ORTHO05D006169 7.3e-107 392.1 648 43.5
Gohir.A06G208600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 6.2e-106 389.0 721 42.6
Gohir.D06G212500 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.1e-105 388.3 721 42.6
Gorai.010G253600 Gossypium raimondii HOM05D005126 ORTHO05D006169 1.2e-104 384.8 718 42.6
Manes.15G164500 Manihot esculenta HOM05D005126 ORTHO05D006169 4.4e-104 382.9 740 40.0
Sabra11G0025300 Salix brachista HOM05D005126 ORTHO05D006169 4.4e-104 382.9 650 42.5
Potri.004G030500 Populus trichocarpa HOM05D005126 ORTHO05D006169 2.4e-102 377.1 738 40.2
GSVIVG01006404001 Vitis vinifera HOM05D005126 ORTHO05D006169 3.2e-102 376.7 706 41.6
Actinidia05547 Actinidia chinensis HOM05D005126 ORTHO05D006169 1.6e-101 374.4 685 41.8
MELO3C007347.2 Cucumis melo HOM05D005126 ORTHO05D006169 3.0e-100 370.2 728 40.8
CSS0033857 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 3.9e-100 369.8 713 40.8
ClCG01G022310 Citrullus lanatus HOM05D005126 ORTHO05D006169 6.6e-100 369.0 513 48.5
TWI63G0986 Tripterygium wilfordii HOM05D005126 ORTHO05D006169 8.7e-100 368.6 768 39.6
Sopen02g024620 Solanum pennellii HOM05D005126 ORTHO05D006169 1.1e-99 368.2 703 40.0
CsaV3_6G049470 Cucumis sativus L. HOM05D005126 ORTHO05D006169 1.9e-99 367.5 728 40.4
Ca_18455_v3 Cicer arietinum L. HOM05D005126 ORTHO05D006169 4.3e-99 366.3 728 41.2
PGSC0003DMG400021720 Solanum tuberosum HOM05D005126 ORTHO05D006169 4.3e-99 366.3 703 40.4
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea HOM05D005126 ORTHO05D006169 4.8e-98 362.8 730 40.3
Nn1g03751 Nelumbo nucifera HOM05D005126 ORTHO05D006169 8.1e-98 362.1 755 39.6
COL.COLO4_33008 Corchorus olitorius HOM05D005126 ORTHO05D006169 1.1e-97 361.7 738 40.4
Sed0023382 Sechium edule HOM05D005126 ORTHO05D006169 1.1e-97 361.7 739 40.3
VMungo0251G0970 Vigna mungo HOM05D005126 ORTHO05D006169 2.4e-97 360.5 737 40.6
Gohir.A10G017400 Gossypium hirsutum HOM05D005126 ORTHO05D006169 3.1e-97 360.1 738 40.4
Psat7g105840 Pisum sativum HOM05D005126 ORTHO05D006169 6.9e-97 359.0 641 44.1
Lj4g0001880 Lotus japonicus HOM05D005126 ORTHO05D006169 9.0e-97 358.6 733 40.8
Phvul.002G219000 Phaseolus vulgaris HOM05D005126 ORTHO05D006169 2.0e-96 357.5 741 39.8
Glyma.07G187500 Glycine max HOM05D005126 ORTHO05D006169 2.6e-96 357.1 742 40.4
CAN.G424.91 Capsicum annuum HOM05D005126 ORTHO05D006169 5.8e-96 355.9 707 40.0
Lalb_Chr09g0327171 Lupinus albus HOM05D005126 ORTHO05D006169 9.9e-96 355.1 737 40.2
Lj2C276T6 Lonicera japonica HOM05D005126 ORTHO05D006169 6.4e-95 352.4 694 41.1
THA.LOC104809525 Tarenaya hassleriana HOM05D005126 ORTHO05D006169 6.4e-95 352.4 714 41.0
Nitab4.5_0006456g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 2.4e-94 350.5 505 47.1
Oeu045309.1 Olea europaea HOM05D005126 ORTHO05D006169 3.2e-94 350.1 719 39.4
vmacro03741 Vaccinium macrocarpon HOM05D005126 ORTHO05D006169 5.4e-94 349.4 533 46.5
Medtr4g092040 Medicago truncatula HOM05D005126 ORTHO05D006169 1.0e-92 345.1 730 39.7
Aqoxy4G01910 Aquilegia oxysepala HOM05D005126 ORTHO05D006169 3.0e-92 343.6 741 38.6
AUR62006818 Chenopodium quinoa HOM05D005126 ORTHO05D006169 1.5e-91 341.3 702 39.5
Glyma.08G061700 Glycine max HOM05D005126 ORTHO05D006169 1.9e-91 340.9 727 39.8
TAR626G0500 Trochodendron aralioides HOM05D005126 ORTHO05D006169 2.5e-91 340.5 493 48.7
Sp2g02860 Schrenkiella parvula HOM05D005126 ORTHO05D006169 4.3e-91 339.7 497 47.3
Sc05g0008390 Simmondsia chinensis HOM05D005126 ORTHO05D006169 4.3e-91 339.7 718 37.5
BcaB04g20363 Brassica carinata HOM05D005126 ORTHO05D006169 7.4e-91 339.0 672 41.7
PSO210G4646 Papaver somniferum HOM05D005126 ORTHO05D006169 2.8e-90 337.0 553 45.0
CARHR050640 Cardamine hirsuta HOM05D005126 ORTHO05D006169 3.6e-90 336.7 661 42.8
Cc02_g11860 Coffea canephora HOM05D005126 ORTHO05D006169 1.1e-89 335.1 709 39.4
Duzib160G0882 Durio zibethinus HOM05D005126 ORTHO05D006169 1.1e-89 335.1 687 40.9
MBI07_g11719_MAGBIO Magnolia biondii HOM05D005126 ORTHO05D006169 1.4e-89 334.7 741 39.0
Thhalv10023224m.g Eutrema salsugineum HOM05D005126 ORTHO05D006169 2.4e-89 334.0 689 40.3
Hund23540 Selenicereus undatus HOM05D005126 ORTHO05D006169 2.0e-88 330.9 710 38.5
HanXRQChr05g0130831 Helianthus annuus HOM05D005126 ORTHO05D006169 5.8e-88 329.3 582 41.4
AT1G61690 Arabidopsis thaliana HOM05D005126 ORTHO05D006169 1.7e-87 327.8 486 47.3
BolC1t03845H Brassica oleracea HOM05D005126 ORTHO05D006169 3.8e-87 326.6 678 40.3
AL2G14430 Arabidopsis lyrata HOM05D005126 ORTHO05D006169 4.9e-87 326.2 698 38.7
EL10Ac4g09560 Beta vulgaris HOM05D005126 ORTHO05D006169 6.4e-87 325.9 715 39.2
BraA01t03188Z Brassica rapa HOM05D005126 ORTHO05D006169 6.4e-87 325.9 670 40.1
C01p38950 Brassica napus HOM05D005126 ORTHO05D006169 8.4e-87 325.5 678 40.1
A01p30560 Brassica napus HOM05D005126 ORTHO05D006169 1.1e-86 325.1 669 40.1
Carub.0002s0337 Capsella rubella HOM05D005126 ORTHO05D006169 1.4e-86 324.7 487 47.2
PSO832G1831 Papaver somniferum HOM05D005126 ORTHO05D006169 4.2e-86 323.2 518 44.6
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla HOM05D005126 ORTHO05D006169 9.3e-86 322.0 714 37.8
MSTRG.4220 Avicennia marina HOM05D005126 ORTHO05D006169 3.5e-85 320.1 510 45.1
Os03g0669800 Oryza sativa ssp. japonica HOM05D005126 ORTHO05D006169 6.0e-85 319.3 739 37.1
Eucgr.H00119 Eucalyptus grandis HOM05D005126 ORTHO05D006169 1.3e-84 318.2 682 38.3
ECA236G2220 Erigeron canadensis HOM05D005126 ORTHO05D006169 2.3e-84 317.4 683 38.8
Aa31LG2G9130 Aethionema arabicum HOM05D005126 ORTHO05D006169 3.0e-84 317.0 701 39.2
DCAR_004173 Daucus carota HOM05D005126 ORTHO05D006169 2.8e-82 310.5 692 38.9
Migut.N00381 Erythranthe guttata HOM05D005126 ORTHO05D006169 3.7e-82 310.1 700 37.3
SGA_v2.0_scaffold216G42402 Striga asiatica HOM05D005126 ORTHO05D006169 4.8e-82 309.7 694 37.0
AUR62000477 Chenopodium quinoa HOM05D005126 ORTHO05D006169 2.4e-81 307.4 512 43.6
ATR0804G089 Amborella trichopoda HOM05D005126 ORTHO05D006169 3.1e-81 307.0 638 38.6
Ah.06g190720 Amaranthus hybridus HOM05D005126 ORTHO05D006169 9.0e-81 305.4 705 37.2
Oeu015946.3 Olea europaea HOM05D005126 ORTHO05D006169 6.7e-76 289.3 623 38.0
PGR031G2928 Punica granatum HOM05D005126 ORTHO05D006169 1.9e-75 287.7 672 37.2
Gorai.011G019500 Gossypium raimondii HOM05D005126 ORTHO05D006169 5.7e-75 286.2 681 37.6
TPR.G13921 Trifolium pratense HOM05D005126 ORTHO05D006169 3.7e-74 283.5 664 38.4
Duzib192G0985 Durio zibethinus HOM05D005126 ORTHO05D006169 1.1e-73 282.0 643 39.2
Gohir.D10G017600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 3.1e-73 280.4 681 37.4
Lsat_1_v5_gn_7_18540 Lactuca sativa HOM05D005126 ORTHO05D006169 7.6e-72 275.8 664 37.3
SEGI_24274 Sequoiadendron giganteum HOM05D005126 ORTHO05D006169 7.2e-70 269.2 730 32.9
CDE01G0539 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 3.6e-69 266.9 694 34.7
Cpa.g.sc871.1 Carica papaya HOM05D005126 ORTHO05D006169 6.1e-69 266.2 526 40.5
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea HOM05D005126 ORTHO05D006169 1.8e-68 264.6 734 35.3
SalBow4G2671 Salvia bowleyana HOM05D005126 ORTHO05D006169 9.7e-67 258.8 726 33.5
Rhsim13G0163000 Rhododendron simsii HOM05D005126 ORTHO05D006169 9.1e-65 252.3 582 37.5
CSS0026607 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 4.5e-64 250.0 534 38.0
Sabra11G0019400 Salix brachista HOM05D005126 ORTHO05D006169 4.5e-64 250.0 540 38.5
Cpa.g.c45157 Carica papaya HOM05D005126 ORTHO05D006169 9.4e-62 242.3 420 43.8
Nitab4.5_0000503g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 5.3e-57 226.5 623 34.8
Peaxi162Scf00931g00055 Petunia axillaris HOM05D005126 ORTHO05D006169 5.9e-56 223.0 620 35.3
SMO141G0003 Selaginella moellendorffii HOM05D005126 ORTHO05D006169 1.0e-52 212.2 667 32.2
CSS0041207 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 2.0e-48 198.0 590 33.2
Zm00001eb245580 Zea mays HOM05D005126 ORTHO05D006169 8.0e-45 186.0 518 34.7
unitig_736.g22481 Utricularia gibba HOM05D005126 ORTHO05D006169 1.0e-44 185.7 644 32.1
CDE12G0914 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 1.4e-41 175.3 603 32.3
Pp3c16_8350 Physcomitrium patens HOM05D005126 ORTHO05D006169 1.2e-40 172.2 689 28.4
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis HOM05D005126 ORTHO05D006169 2.1e-37 161.4 696 28.3
HPP92_016843 Vanilla planifolia HOM05D005126 ORTHO05D006169 1.4e-36 158.7 349 38.1
Prupe.4G012200 Prunus persica HOM05D005126 ORTHO05D006169 4.4e-35 153.7 114 69.3
Mapoly0032s0118 Marchantia polymorpha HOM05D005126 ORTHO05D006169 5.5e-30 136.7 666 25.7
Nitab4.5_0000503g0120 Nicotiana tabacum HOM05D005126 ORTHO05D006169 8.0e-29 132.9 110 62.7
arahy.Tifrunner.gnm1.ann1.TF7ZQX Arachis hypogaea HOM05D005126 ORTHO05D006169 7.8e-24 116.3 251 38.6
Actinidia26962 Actinidia chinensis HOM05D005126 ORTHO05D006169 2.1e-21 108.2 406 31.3
Oeu022112.1 Olea europaea HOM05D005126 ORTHO05D006169 2.3e-20 104.8 59 79.7
SHI02133 Sapria himalayana HOM05D005126 ORTHO05D006169 8.9e-20 102.8 299 33.8
Atru.chr10.2050 Acer truncatum HOM05D005126 ORTHO05D006169 5.7e-19 100.1 90 61.1
FAN25G0472 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.7e-18 98.6 104 58.7
FAN25G1652 Fragaria x ananassa HOM05D005126 ORTHO05D006169 6.6e-15 86.7 65 73.8
TAR626G0260 Trochodendron aralioides HOM05D005126 ORTHO05D006169 5.6e-14 83.6 90 60.0
Atru.chr10.2054 Acer truncatum HOM05D005126 ORTHO05D006169 1.2e-13 82.4 104 53.8
GSVIVG01002717001 Vitis vinifera HOM05D005126 ORTHO05D006169 4.7e-13 80.5 258 30.2
Oeu030881.1 Olea europaea HOM05D005126 ORTHO05D006169 7.0e-09 66.6 372 27.2
Atru.chr10.2051 Acer truncatum HOM05D005126 ORTHO05D006169 1.7e-07 62.0 84 48.8
MELO3C007345.2 Cucumis melo HOM05D005126 ORTHO05D006169 8.6e-07 59.7 344 29.7


User provided reference genes

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