Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 1.2e-55 219.5 103 100.0
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 5.6e-34 147.5 90 70.0
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 8.9e-32 140.2 111 61.3
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 1.5e-31 139.4 113 64.6
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 2.6e-31 138.7 113 63.7
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 4.4e-31 137.9 111 60.4
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 2.2e-30 135.6 96 61.5
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 2.2e-30 135.6 111 59.5
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 2.9e-30 135.2 102 62.7
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 4.9e-30 134.4 103 60.2
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.1e-29 133.3 91 62.6
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.1e-29 131.3 106 58.5
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 5.4e-29 131.0 102 58.8
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 7.1e-29 130.6 103 54.4
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.6e-28 129.4 98 58.2
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 1.6e-28 129.4 101 57.4
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 4.6e-28 127.9 76 67.1
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 2.3e-27 125.6 98 56.1
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 6.6e-27 124.0 115 54.8
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 8.6e-27 123.6 89 56.2
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 1.1e-26 123.2 77 63.6
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.9e-26 122.5 104 49.0
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 1.9e-26 122.5 105 55.2
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 4.3e-26 121.3 104 56.7
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 5.6e-26 120.9 100 58.0
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 5.6e-26 120.9 89 57.3
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 9.5e-26 120.2 85 58.8
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 2.8e-25 118.6 105 51.4
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 2.8e-25 118.6 87 57.5
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 2.8e-25 118.6 94 57.4
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 4.7e-25 117.9 100 50.0
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 6.2e-25 117.5 105 49.5
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 6.2e-25 117.5 95 54.7
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.8e-24 115.9 93 54.8
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 3.1e-24 115.2 108 51.9
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 3.1e-24 115.2 108 51.9
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.0e-24 114.8 102 52.0
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 4.0e-24 114.8 89 57.3
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 6.8e-24 114.0 90 48.9
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 6.8e-24 114.0 90 48.9
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 6.8e-24 114.0 90 50.0
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.5e-23 112.8 108 50.9
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 4.4e-23 111.3 94 53.2
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 7.6e-23 110.5 101 53.5
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.9e-22 108.6 103 47.6
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 1.2e-20 103.2 90 53.3
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 7.8e-20 100.5 76 60.5
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 6.6e-19 97.4 73 53.4
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 8.7e-19 97.1 102 45.1
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 1.1e-18 96.7 70 54.3
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 4.3e-18 94.7 112 40.2
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 7.3e-18 94.0 73 52.1
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 1.3e-17 93.2 110 42.7
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 1.3e-17 93.2 73 50.7
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.3e-17 93.2 69 55.1
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 2.1e-17 92.4 104 42.3
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 2.1e-17 92.4 70 55.7
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 2.1e-17 92.4 70 55.7
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 2.1e-17 92.4 70 55.7
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 6.2e-17 90.9 73 50.7
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 6.2e-17 90.9 73 50.7
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 1.1e-16 90.1 113 39.8
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 1.1e-16 90.1 113 39.8
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 1.1e-16 90.1 113 39.8
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 1.4e-16 89.7 113 39.8
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 1.8e-16 89.4 83 48.2
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 3.1e-16 88.6 70 54.3
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 3.1e-16 88.6 113 39.8
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 3.1e-16 88.6 113 39.8
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 3.1e-16 88.6 97 44.3
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 2.0e-15 85.9 79 48.1
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 3.4e-15 85.1 65 50.8
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 7.6e-15 84.0 65 50.8
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 2.9e-14 82.0 64 53.1
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 1.9e-13 79.3 92 41.3
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 1.9e-13 79.3 92 41.3
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 3.5e-12 75.1 111 36.9
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 3.5e-12 75.1 97 40.2
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 4.6e-12 74.7 89 40.4
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 8.7e-11 70.5 109 35.8
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 1.3e-06 56.6 81 37.0


User provided reference genes

Program Settings