Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 1.1e-102 376.7 208 100.0
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.2e-75 287.0 208 80.8
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 8.5e-74 280.8 214 78.0
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 2.1e-64 249.6 204 67.2
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 2.1e-64 249.6 206 67.5
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 1.6e-59 233.4 206 67.0
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 2.0e-59 233.0 211 68.2
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 3.5e-59 232.3 197 65.5
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 4.5e-59 231.9 212 65.1
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 1.3e-58 230.3 207 62.3
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 1.7e-58 229.9 203 66.5
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 5.0e-58 228.4 181 71.3
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 6.6e-58 228.0 209 64.6
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 1.1e-57 227.3 209 66.5
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 4.3e-57 225.3 209 66.0
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 4.3e-57 225.3 209 66.0
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 2.8e-56 222.6 214 59.3
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 4.7e-56 221.9 207 65.2
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 6.8e-55 218.0 203 63.1
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 6.8e-55 218.0 206 64.6
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.0e-54 216.5 199 63.8
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 4.4e-54 215.3 208 60.6
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 2.9e-53 212.6 210 58.6
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 2.9e-53 212.6 211 63.0
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 2.9e-53 212.6 206 62.1
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 6.4e-53 211.5 204 59.3
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 1.4e-52 210.3 215 60.5
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 2.4e-52 209.5 172 70.3
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 3.2e-52 209.1 211 64.5
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 4.1e-52 208.8 214 59.8
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 7.0e-52 208.0 210 60.0
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 1.2e-51 207.2 203 60.6
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 2.7e-51 206.1 222 55.9
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 6.0e-51 204.9 210 61.4
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 7.8e-51 204.5 211 61.6
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 6.6e-50 201.4 174 63.8
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 8.6e-50 201.1 183 63.4
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 4.3e-49 198.7 189 58.7
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 7.3e-49 198.0 207 58.9
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 9.5e-49 197.6 185 59.5
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 1.6e-48 196.8 189 61.9
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 4.7e-48 195.3 174 59.8
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 8.0e-48 194.5 198 56.1
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 1.1e-47 194.1 198 55.6
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 1.8e-47 193.4 198 55.6
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.3e-47 193.0 147 70.7
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 3.1e-47 192.6 146 70.5
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 6.8e-47 191.4 190 56.3
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 8.9e-47 191.0 201 57.2
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 1.2e-46 190.7 147 76.9
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 9.8e-46 187.6 220 58.2
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.7e-45 186.8 156 68.6
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 3.7e-45 185.7 206 52.4
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 8.3e-45 184.5 221 57.9
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 9.2e-44 181.0 191 60.2
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 2.7e-43 179.5 216 55.6
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 2.7e-43 179.5 176 61.9
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 4.6e-43 178.7 168 60.7
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 8.6e-42 174.5 188 55.3
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 1.2e-40 170.6 160 66.9
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 1.6e-40 170.2 146 64.4
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 4.7e-40 168.7 149 64.4
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 4.7e-40 168.7 167 60.5
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.4e-39 167.2 172 56.4
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 8.9e-39 164.5 148 62.2
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 2.2e-37 159.8 215 49.8
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 4.9e-37 158.7 174 50.0
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 6.4e-37 158.3 210 52.4
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 6.4e-37 158.3 203 49.8
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 8.3e-37 157.9 209 51.7
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 8.3e-37 157.9 182 48.4
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 3.2e-36 156.0 174 47.7
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 2.7e-35 152.9 168 54.8
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 4.6e-35 152.1 124 67.7
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 3.0e-34 149.4 150 60.7
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 8.6e-34 147.9 171 55.6
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 2.5e-33 146.4 199 48.2
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 2.5e-33 146.4 168 54.8
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 2.5e-33 146.4 168 54.8
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 3.3e-33 146.0 193 45.1
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 4.3e-33 145.6 197 45.2
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 9.5e-33 144.4 205 49.3
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.2e-32 144.1 159 56.6
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 1.2e-32 144.1 166 56.0
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 3.6e-32 142.5 166 54.8
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 3.6e-32 142.5 166 54.8
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 8.1e-32 141.4 207 46.9
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 1.4e-31 140.6 168 54.8
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 1.4e-31 140.6 168 54.8
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 1.8e-31 140.2 124 68.5
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 3.1e-31 139.4 206 45.6
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 3.1e-31 139.4 175 54.3
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 5.2e-31 138.7 151 48.3
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 3.9e-26 122.5 139 55.4
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 6.6e-26 121.7 159 52.8
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 1.1e-25 120.9 127 65.4
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 2.0e-22 110.2 136 53.7
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 7.8e-19 98.2 162 39.5
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 3.0e-18 96.3 211 35.1
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 1.1e-17 94.4 99 48.5
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.1e-17 94.4 191 41.4
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 4.3e-17 92.4 141 41.1
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 4.8e-16 89.0 148 46.6
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 1.9e-12 77.0 184 38.0
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 2.3e-10 70.1 143 42.0
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 3.3e-09 66.2 207 29.0
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 7.4e-09 65.1 174 38.5
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 7.4e-09 65.1 174 38.5
HanXRQChr17g0543701 Helianthus annuus HOM05D007192 ORTHO05D009034 9.9e-06 54.7 53 58.5


User provided reference genes

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