Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 4.6e-98 361.3 192 100.0
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 1.4e-57 226.9 204 68.6
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 2.6e-45 186.0 202 61.9
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.0e-44 184.1 200 61.0
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.1e-43 180.6 193 58.0
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.1e-43 180.6 207 54.1
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 5.5e-43 178.3 195 55.4
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.2e-42 177.2 195 55.9
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.6e-42 176.8 200 60.0
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 4.7e-42 175.3 196 54.1
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 6.1e-42 174.9 201 58.7
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.8e-41 173.3 194 55.2
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.1e-40 170.6 211 52.6
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.1e-40 170.6 194 54.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.6e-40 169.5 205 51.7
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.6e-40 169.5 205 51.7
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 3.3e-40 169.1 193 51.8
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 7.4e-40 167.9 143 60.1
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.3e-39 167.2 133 63.9
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 1.7e-39 166.8 193 53.4
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 3.7e-39 165.6 195 50.8
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 4.8e-39 165.2 150 60.0
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 6.3e-39 164.9 199 47.7
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 1.1e-38 164.1 150 59.3
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 1.4e-38 163.7 203 48.8
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.8e-38 163.3 145 60.7
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 5.3e-38 161.8 152 56.6
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 9.1e-38 161.0 193 47.7
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.6e-37 160.2 199 49.7
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 2.0e-37 159.8 101 75.2
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.0e-37 159.8 111 71.2
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 2.0e-37 159.8 130 63.1
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.6e-37 159.5 108 73.1
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.6e-37 159.5 113 68.1
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 2.6e-37 159.5 212 48.1
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 3.5e-37 159.1 196 50.0
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 3.5e-37 159.1 202 51.0
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 4.5e-37 158.7 149 59.7
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.5e-37 158.7 204 48.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 7.7e-37 157.9 151 56.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.0e-36 157.5 111 69.4
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.0e-36 157.5 113 69.0
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.0e-36 157.5 192 45.3
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.3e-36 157.1 97 78.4
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.3e-36 157.1 144 56.9
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 1.3e-36 157.1 108 72.2
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.7e-36 156.8 176 51.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.7e-36 156.8 189 50.8
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 2.2e-36 156.4 193 51.3
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.2e-36 156.4 108 72.2
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 2.9e-36 156.0 188 50.0
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.9e-36 156.0 198 48.5
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 5.0e-36 155.2 110 70.0
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 5.0e-36 155.2 194 50.5
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 6.5e-36 154.8 193 50.8
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 6.5e-36 154.8 193 50.8
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 8.5e-36 154.5 198 49.5
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 8.5e-36 154.5 199 49.7
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.5e-35 153.7 108 71.3
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.5e-35 153.7 206 47.1
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.9e-35 153.3 193 49.7
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 3.2e-35 152.5 202 48.5
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 3.2e-35 152.5 192 47.4
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 4.2e-35 152.1 194 47.9
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 9.4e-35 151.0 202 48.5
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.6e-34 150.2 133 60.2
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.1e-34 149.8 114 63.2
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.1e-34 149.8 195 50.8
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.6e-34 149.1 94 75.5
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 4.7e-34 148.7 197 48.7
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 8.0e-34 147.9 105 70.5
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.0e-33 147.5 105 69.5
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.0e-33 147.5 183 45.4
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 1.4e-33 147.1 149 55.0
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 3.0e-33 146.0 193 46.1
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 3.0e-33 146.0 192 45.3
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 5.2e-33 145.2 168 48.8
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.3e-32 142.5 198 46.5
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 3.3e-32 142.5 212 44.3
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 4.4e-32 142.1 105 66.7
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 7.5e-32 141.4 109 64.2
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 9.7e-32 141.0 112 58.0
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.3e-31 140.6 197 46.2
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 2.2e-31 139.8 207 41.5
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.8e-31 139.4 95 69.5
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 3.7e-31 139.0 194 44.3
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 3.1e-30 136.0 181 47.5
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.3e-30 135.2 105 64.8
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 5.0e-28 128.6 182 48.4
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.4e-25 120.6 83 69.9
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 3.0e-25 119.4 72 79.2
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 4.0e-25 119.0 126 46.8
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 6.8e-25 118.2 130 52.3
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 8.8e-25 117.9 102 57.8
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.2e-24 117.5 101 58.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.5e-24 117.1 102 57.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 2.2e-23 113.2 180 41.7
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 2.8e-23 112.8 88 63.6
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 3.1e-22 109.4 61 85.2
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 2.3e-20 103.2 82 48.8
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 2.9e-20 102.8 119 47.1
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 2.1e-18 96.7 105 43.8
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.4e-17 94.0 145 45.5
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 7.5e-16 88.2 89 49.4
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.2e-10 70.9 43 72.1
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 5.2e-09 65.5 148 35.1
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 7.5e-08 61.6 85 47.1


User provided reference genes

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