Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G005300 Prunus persica HOM05D011684 ORTHO05D011224 2.3e-84 315.5 153 100.0
FAN21G3814 Fragaria x ananassa HOM05D002244 ORTHO05D002269 1.5e-46 189.9 151 64.9
RcHm_v2.0_Chr5g0000641 Rosa chinensis HOM05D011684 ORTHO05D011224 7.2e-46 187.6 155 64.5
FAN25G1760 Fragaria x ananassa HOM05D002244 ORTHO05D002269 1.6e-45 186.4 151 64.2
FvH4_3g00481 Fragaria vesca HOM05D011684 ORTHO05D011224 8.0e-45 184.1 151 64.2
Haze_07006 Corylus avellana HOM05D011684 ORTHO05D011224 5.2e-44 181.4 156 59.0
FAN25G0603 Fragaria x ananassa HOM05D011684 ORTHO05D011224 6.8e-44 181.0 155 63.2
Cfa000047 Carpinus fangiana HOM05D011684 ORTHO05D011224 1.2e-43 180.3 154 59.1
QL05p068133 Quercus lobata HOM05D011684 ORTHO05D011224 1.3e-39 166.8 150 57.3
Potri.006G018200 Populus trichocarpa HOM05D011684 ORTHO05D011224 1.0e-36 157.1 153 54.2
Sabra06G0013200 Salix brachista HOM05D011684 ORTHO05D011224 9.2e-33 144.1 149 51.7
Cpa.g.sc27.244 Carica papaya HOM05D011684 ORTHO05D011224 1.7e-31 139.8 153 46.4
CiPaw.09G107800 Carya illinoinensis HOM05D011684 ORTHO05D011224 6.4e-26 121.3 152 45.4
Sabra16G0011700 Salix brachista HOM05D011684 ORTHO05D011224 2.5e-22 109.4 139 44.6
Lsat_1_v5_gn_4_63581 Lactuca sativa HOM05D002244 ORTHO05D002269 7.3e-22 107.8 148 42.6
Thecc.06G238700 Theobroma cacao HOM05D011684 ORTHO05D011224 4.4e-19 98.6 129 44.2
Atru.chr1.2295 Acer truncatum HOM05D011684 ORTHO05D011224 2.1e-16 89.7 74 56.8
FvH4_3g00440 Fragaria vesca HOM05D002244 ORTHO05D002269 6.0e-16 88.2 57 68.4
Phvul.006G140200 Phaseolus vulgaris HOM05D013456 ORTHO05D011224 3.9e-15 85.5 154 33.8
VMungo0540G0506 Vigna mungo HOM05D013456 ORTHO05D011224 3.6e-13 79.0 154 33.1
ECA234G3997 Erigeron canadensis HOM05D011684 ORTHO05D011224 4.7e-13 78.6 148 36.5
COL.COLO4_31926 Corchorus olitorius HOM05D027799 ORTHO05D011224 6.2e-13 78.2 149 39.6
Psat1g174320 Pisum sativum HOM05D013456 ORTHO05D011224 1.1e-12 77.4 154 35.1
Glyma.15G118051 Glycine max HOM05D013456 ORTHO05D011224 1.8e-12 76.6 154 34.4
Gohir.D05G178850 Gossypium hirsutum HOM05D027799 ORTHO05D011224 5.2e-12 75.1 156 36.5
Medtr2g026595 Medicago truncatula HOM05D013456 ORTHO05D011224 5.2e-12 75.1 155 34.8
Gorai.009G184300 Gossypium raimondii HOM05D027799 ORTHO05D011224 6.8e-12 74.7 156 36.5
TPR.G10578 Trifolium pratense HOM05D013456 ORTHO05D011224 6.8e-12 74.7 154 32.5
Gohir.A05G175800 Gossypium hirsutum HOM05D027799 ORTHO05D011224 4.4e-11 72.0 156 35.9
ClCG01G021280 Citrullus lanatus HOM05D029069 ORTHO05D011224 5.8e-11 71.6 154 35.1
Glyma.09G013200 Glycine max HOM05D013456 ORTHO05D011224 1.3e-10 70.5 153 31.4
Lj6g0017788 Lotus japonicus HOM05D013456 ORTHO05D011224 1.3e-10 70.5 154 33.1
Ca_00753_v3 Cicer arietinum L. HOM05D013456 ORTHO05D011224 4.9e-10 68.6 93 45.2
Sed0001048 Sechium edule HOM05D039430 ORTHO05D034713 5.4e-09 65.1 154 34.4
CsaV3_6G048300 Cucumis sativus L. HOM05D029069 ORTHO05D011224 9.2e-09 64.3 154 32.5
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 7.8e-08 61.2 164 30.5
Potri.015G005700 Populus trichocarpa HOM05D002916 ORTHO05D003152 1.0e-07 60.8 164 33.5
QL09p007312 Quercus lobata HOM05D002916 ORTHO05D003152 3.0e-07 59.3 164 26.2
MELO3C008013.2 Cucumis melo HOM05D029069 ORTHO05D011224 6.6e-07 58.2 162 32.7
Eucgr.E03881 Eucalyptus grandis HOM05D011684 ORTHO05D011224 6.6e-07 58.2 92 39.1
Sed0018070 Sechium edule HOM05D029069 ORTHO05D011224 6.6e-07 58.2 160 31.9
CsaV3_1G015500 Cucumis sativus L. HOM05D039430 ORTHO05D034713 8.6e-07 57.8 93 38.7
Potri.012G022300 Populus trichocarpa HOM05D002916 ORTHO05D003152 8.6e-07 57.8 165 33.3
CiPaw.06G042000 Carya illinoinensis HOM05D002916 ORTHO05D003152 1.1e-06 57.4 169 32.5
Sed0016396 Sechium edule HOM05D002916 ORTHO05D003152 1.1e-06 57.4 147 31.3
Manes.01G042300 Manihot esculenta HOM05D002916 ORTHO05D003152 2.5e-06 56.2 162 29.6
TPR.G10592 Trifolium pratense HOM05D002244 ORTHO05D002269 3.3e-06 55.8 91 40.7
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 7.3e-06 54.7 164 28.0


User provided reference genes

Program Settings