Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G289700 Prunus persica HOM05D005182 ORTHO05D006631 1.5e-45 185.7 86 100.0
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 3.6e-34 147.9 75 90.7
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 3.9e-33 144.4 75 88.0
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 7.4e-32 140.2 75 84.0
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 3.7e-31 137.9 75 81.3
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 1.1e-30 136.3 75 80.0
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 1.8e-30 135.6 75 80.0
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 2.4e-30 135.2 75 81.3
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 4.1e-30 134.4 75 81.3
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 1.2e-29 132.9 75 77.3
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 1.2e-29 132.9 73 80.8
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 2.0e-29 132.1 74 75.7
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 2.6e-29 131.7 73 80.8
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 2.6e-29 131.7 75 78.7
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 2.6e-29 131.7 75 78.7
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 2.6e-29 131.7 73 80.8
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 3.5e-29 131.3 75 81.3
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 3.5e-29 131.3 75 81.3
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 3.5e-29 131.3 73 79.5
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 3.5e-29 131.3 73 80.8
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 3.5e-29 131.3 78 76.9
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 4.5e-29 131.0 75 77.3
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 4.5e-29 131.0 73 79.5
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 7.7e-29 130.2 74 77.0
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 7.7e-29 130.2 75 76.0
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 1.0e-28 129.8 75 76.0
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 1.0e-28 129.8 73 79.5
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 1.0e-28 129.8 74 77.0
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 1.3e-28 129.4 74 77.0
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.7e-28 129.0 75 76.0
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 1.7e-28 129.0 74 77.0
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 2.2e-28 128.6 75 74.7
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 2.9e-28 128.3 75 76.0
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 3.8e-28 127.9 75 74.7
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 3.8e-28 127.9 75 72.0
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 3.8e-28 127.9 75 76.0
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 5.0e-28 127.5 84 67.9
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 5.0e-28 127.5 75 74.7
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 6.5e-28 127.1 75 72.0
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 6.5e-28 127.1 74 70.3
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 6.5e-28 127.1 75 73.3
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 8.5e-28 126.7 75 76.0
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 1.1e-27 126.3 74 74.3
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 1.1e-27 126.3 74 73.0
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 1.1e-27 126.3 75 74.7
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.5e-27 125.9 75 74.7
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 1.5e-27 125.9 74 71.6
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 2.5e-27 125.2 75 72.0
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 2.5e-27 125.2 74 74.3
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 2.5e-27 125.2 75 72.0
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 2.5e-27 125.2 74 73.0
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 2.5e-27 125.2 75 72.0
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 4.2e-27 124.4 73 69.9
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 7.2e-27 123.6 75 72.0
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 7.2e-27 123.6 75 69.3
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 7.2e-27 123.6 75 72.0
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 7.2e-27 123.6 75 70.7
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 9.4e-27 123.2 74 70.3
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 9.4e-27 123.2 74 70.3
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 9.4e-27 123.2 74 68.9
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 9.4e-27 123.2 74 68.9
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 9.4e-27 123.2 74 73.0
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 9.4e-27 123.2 87 70.1
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 1.6e-26 122.5 74 73.0
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 2.1e-26 122.1 75 70.7
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 2.1e-26 122.1 75 70.7
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 2.7e-26 121.7 74 68.9
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 3.6e-26 121.3 74 67.6
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 6.1e-26 120.6 75 70.7
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 8.0e-26 120.2 75 69.3
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 1.4e-25 119.4 74 67.6
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 1.4e-25 119.4 74 67.6
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 1.4e-25 119.4 71 73.2
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 1.8e-25 119.0 74 67.6
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 1.8e-25 119.0 74 67.6
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 1.8e-25 119.0 74 68.9
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 2.3e-25 118.6 72 69.4
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 4.0e-25 117.9 74 66.2
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 4.0e-25 117.9 74 66.2
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 4.0e-25 117.9 74 66.2
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 4.0e-25 117.9 74 66.2
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 5.2e-25 117.5 74 66.2
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 5.2e-25 117.5 74 66.2
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 1.5e-24 115.9 74 66.2
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 1.5e-24 115.9 83 60.2
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.0e-24 115.5 65 78.5
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 2.6e-24 115.2 75 66.7
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 4.4e-24 114.4 83 59.0
Medtr6g005410 Medicago truncatula HOM05D005182 ORTHO05D006631 5.7e-24 114.0 73 69.9
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 7.5e-24 113.6 72 65.3
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 7.5e-24 113.6 72 65.3
arahy.Tifrunner.gnm1.ann1.C5A6Z1 Arachis hypogaea HOM05D005182 ORTHO05D006631 2.2e-23 112.1 66 74.2
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 2.8e-23 111.7 65 75.4
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 2.8e-23 111.7 75 62.7
Rhsim02G0095200 Rhododendron simsii HOM05D005182 ORTHO05D006631 3.7e-23 111.3 96 58.3
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 4.8e-23 110.9 64 76.6
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea HOM05D005182 ORTHO05D006631 8.3e-23 110.2 110 52.7
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 1.1e-22 109.8 64 75.0
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 1.8e-22 109.0 72 62.5
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.8e-22 109.0 65 75.4
Psat1g058400 Pisum sativum HOM05D005182 ORTHO05D006631 7.0e-22 107.1 72 68.1
Rhsim09G0149800 Rhododendron simsii HOM05D005182 ORTHO05D006631 9.1e-22 106.7 75 66.7
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 9.1e-22 106.7 64 73.4
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 2.7e-21 105.1 65 72.3
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 2.7e-21 105.1 65 72.3
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis HOM05D005182 ORTHO05D006631 7.7e-21 103.6 72 56.9
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 8.5e-20 100.1 75 64.0
SMO356G0462 Selaginella moellendorffii HOM05D005182 ORTHO05D006631 1.1e-19 99.8 72 55.6
Hund04415 Selenicereus undatus HOM05D005182 ORTHO05D006631 1.6e-18 95.9 80 55.0
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 6.1e-18 94.0 65 60.0
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 6.1e-18 94.0 50 86.0
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 6.1e-18 94.0 72 52.8
RcHm_v2.0_Chr7g0228061 Rosa chinensis HOM05D005182 ORTHO05D006631 1.0e-17 93.2 74 60.8
Ah.15g100150 Amaranthus hybridus HOM05D008863 ORTHO05D006631 4.0e-17 91.3 65 56.9
Psat1g058360 Pisum sativum HOM05D005182 ORTHO05D006631 4.0e-17 91.3 69 56.5
CBR_g4824 Chara braunii HOM05D005182 ORTHO05D006631 2.8e-15 85.1 73 46.6
Cpa.g.c30633.2 Carica papaya HOM05D005182 ORTHO05D006631 1.8e-14 82.4 58 63.8
SHI25748 Sapria himalayana HOM05D005182 ORTHO05D006631 3.1e-14 81.6 70 55.7
MCO08G118 Micromonas commoda HOM05D005182 ORTHO05D006631 4.1e-14 81.3 68 50.0
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 5.9e-13 77.4 41 82.9
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 5.0e-12 74.3 54 61.1
CSS0002021 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 2.5e-11 72.0 40 82.5
Prupe.3G207400 Prunus persica HOM05D005182 ORTHO05D006631 4.2e-11 71.2 41 82.9
SEGI_02514 Sequoiadendron giganteum HOM05D005182 ORTHO05D006631 4.2e-11 71.2 41 75.6
Cpa.g.sc130.27 Carica papaya HOM05D005182 ORTHO05D006631 5.5e-11 70.9 41 78.0
Cpa.g.sc171.39 Carica papaya HOM05D005182 ORTHO05D006631 9.5e-11 70.1 41 75.6
RcHm_v2.0_Chr7g0228091 Rosa chinensis HOM05D005182 ORTHO05D344069 1.2e-10 69.7 96 42.7
Glyma.17G203751 Glycine max HOM05D005182 ORTHO05D006631 8.9e-09 63.5 40 70.0
Cpa.g.sc130.26 Carica papaya HOM05D005182 ORTHO05D006631 1.2e-08 63.2 39 69.2
Mapoly0034s0026 Marchantia polymorpha HOM05D005182 ORTHO05D006631 1.5e-08 62.8 41 63.4
Hund03875 Selenicereus undatus HOM05D005182 ORTHO05D006631 2.6e-08 62.0 41 63.4
Cre04.g214100 Chlamydomonas reinhardtii HOM05D005182 ORTHO05D006631 5.4e-06 54.3 57 40.4


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