Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.2e-135 486.5 240 100.0
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 1.1e-75 287.3 254 61.4
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 2.8e-60 236.1 241 53.5
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.4e-59 233.0 241 53.1
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.4e-57 224.9 229 52.8
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 8.4e-57 224.6 241 53.1
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.9e-56 223.4 239 53.1
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.7e-54 216.9 243 49.4
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 2.1e-52 209.9 230 50.4
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 6.2e-52 208.4 236 47.5
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 4.0e-51 205.7 244 48.8
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.2e-50 204.1 242 47.9
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 5.8e-50 201.8 241 47.7
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 2.4e-48 196.4 239 46.4
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 4.2e-48 195.7 202 53.0
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 7.4e-45 184.9 242 42.6
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 3.1e-43 179.5 230 42.6
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 4.0e-43 179.1 244 42.2
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 6.9e-43 178.3 244 42.2
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 1.5e-42 177.2 228 43.4
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 3.4e-42 176.0 244 41.8
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 2.4e-40 169.9 227 47.6
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.8e-38 163.7 220 46.8
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 6.7e-38 161.8 218 41.7
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 8.7e-38 161.4 233 41.2
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 8.2e-36 154.8 237 41.8
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 1.4e-35 154.1 241 42.7
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 6.9e-35 151.8 234 40.6
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 9.0e-35 151.4 245 41.6
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 1.5e-34 150.6 183 48.6
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 2.0e-34 150.2 183 48.6
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.0e-34 150.2 218 40.8
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.6e-34 149.8 241 41.9
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 2.9e-33 146.4 226 37.6
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 6.5e-33 145.2 219 42.5
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 1.1e-32 144.4 215 44.2
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 4.2e-32 142.5 164 50.6
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 2.1e-31 140.2 188 43.6
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 2.7e-31 139.8 211 38.9
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 3.5e-31 139.4 167 46.1
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 2.8e-28 129.8 225 39.1
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 2.8e-28 129.8 230 36.5
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 3.7e-28 129.4 270 34.4
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 1.1e-27 127.9 221 38.0
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 1.4e-27 127.5 205 37.6
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.4e-27 127.5 230 36.1
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 3.1e-27 126.3 227 38.8
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 6.9e-27 125.2 159 43.4
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 5.9e-26 122.1 207 35.7
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.0e-25 121.3 247 34.0
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.2e-25 120.2 115 51.3
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 2.1e-23 113.6 160 45.6
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.0e-22 111.3 164 43.9
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 5.1e-22 109.0 116 47.4
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 9.7e-21 104.8 218 34.4
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 1.3e-20 104.4 174 35.6
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 2.2e-17 93.6 125 41.6
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 8.5e-17 91.7 222 31.1
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 1.4e-14 84.3 227 28.6
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 4.5e-10 69.3 185 33.5
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 4.5e-10 69.3 44 65.9
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 7.7e-10 68.6 116 34.5
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 1.0e-09 68.2 128 33.6
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 2.5e-08 63.5 106 41.5
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 6.7e-06 55.5 116 29.3
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 6.7e-06 55.5 156 29.5


User provided reference genes

Program Settings