Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G275500 Prunus persica HOM05D002627 ORTHO05D002823 0.0e+00 1181.4 633 100.0
MD09G1042200 Malus domestica HOM05D002627 ORTHO05D002823 3.5e-155 552.7 520 65.6
RcHm_v2.0_Chr2g0169731 Rosa chinensis HOM05D002627 ORTHO05D002823 4.1e-151 539.3 526 59.9
MD17G1043600 Malus domestica HOM05D002627 ORTHO05D002823 2.2e-149 533.5 546 62.6
FAN05G1906 Fragaria x ananassa HOM05D002627 ORTHO05D002823 2.4e-119 433.7 530 51.3
FAN09G0791 Fragaria x ananassa HOM05D002627 ORTHO05D002823 9.1e-119 431.8 530 51.3
FAN14G0027 Fragaria x ananassa HOM05D002627 ORTHO05D002823 9.1e-119 431.8 530 51.1
FvH4_6g49700 Fragaria vesca HOM05D002627 ORTHO05D002823 1.0e-117 428.3 530 50.9
Haze_14609 Corylus avellana HOM05D001839 ORTHO05D001867 3.2e-95 353.6 544 45.0
CiPaw.03G032500 Carya illinoinensis HOM05D002627 ORTHO05D002823 1.6e-83 314.7 547 41.9
Atru.chr8.2472 Acer truncatum HOM05D002627 ORTHO05D002823 8.6e-77 292.4 545 38.7
CiPaw.04G021400 Carya illinoinensis HOM05D002627 ORTHO05D002823 2.2e-72 277.7 544 38.6
Sabra16G0229400 Salix brachista HOM05D002627 ORTHO05D002823 3.3e-68 263.8 544 37.3
Potri.001G350000 Populus trichocarpa HOM05D002627 ORTHO05D002823 7.3e-68 262.7 530 40.0
Cpa.g.sc14.65 Carica papaya HOM05D002627 ORTHO05D002823 3.1e-66 257.3 535 38.3
Ciclev10011309m.g Citrus clementina HOM05D002627 ORTHO05D002823 1.9e-63 248.1 547 36.6
Thecc.04G069700 Theobroma cacao HOM05D002627 ORTHO05D002823 1.9e-63 248.1 540 36.3
Manes.15G177600 Manihot esculenta HOM05D002627 ORTHO05D002823 9.6e-60 235.7 546 37.5
QL02p079317 Quercus lobata HOM05D002627 ORTHO05D002823 9.6e-60 235.7 543 37.9
Dinv33687 Davidia involucrata HOM05D002627 ORTHO05D002823 1.4e-58 231.9 541 36.6
Duzib147G1604 Durio zibethinus HOM05D002627 ORTHO05D002823 4.2e-55 220.3 536 35.3
TWI56G0357 Tripterygium wilfordii HOM05D002627 ORTHO05D002823 1.9e-52 211.5 548 33.4
Potri.017G074300 Populus trichocarpa HOM05D002627 ORTHO05D002823 1.6e-51 208.4 506 36.4
TWI12G1193 Tripterygium wilfordii HOM05D002627 ORTHO05D002823 4.9e-48 196.8 548 33.8
TAR374G0258 Trochodendron aralioides HOM05D002627 ORTHO05D002823 2.5e-44 184.5 543 31.5
TAR371G0654 Trochodendron aralioides HOM05D002627 ORTHO05D002823 5.6e-44 183.3 538 32.2
THA.LOC104805426 Tarenaya hassleriana HOM05D002627 ORTHO05D002823 6.5e-40 169.9 554 32.3
TWI56G0261 Tripterygium wilfordii HOM05D002627 ORTHO05D002823 4.6e-38 163.7 495 29.5
TAR629G2000 Trochodendron aralioides HOM05D002627 ORTHO05D002823 1.5e-36 158.7 425 32.7
THA.LOC104822818 Tarenaya hassleriana HOM05D002627 ORTHO05D002823 4.3e-36 157.1 491 33.4
CSS0022026 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 1.4e-34 152.1 547 29.3
Glyma.19G017100 Glycine max HOM05D002627 ORTHO05D002823 9.0e-34 149.4 504 30.4
Nn3g17059 Nelumbo nucifera HOM05D002627 ORTHO05D002823 7.6e-33 146.4 542 30.1
Glyma.13G067300 Glycine max HOM05D002627 ORTHO05D002823 1.4e-31 142.1 507 30.0
PGR083G1932 Punica granatum HOM05D002627 ORTHO05D002823 3.0e-29 134.4 543 30.0
Haze_07418 Corylus avellana HOM05D002627 ORTHO05D002823 6.7e-29 133.3 565 29.6
Dinv13122 Davidia involucrata HOM05D002627 ORTHO05D002823 1.1e-26 125.9 536 28.4
Phvul.004G023400 Phaseolus vulgaris HOM05D002627 ORTHO05D002823 3.1e-26 124.4 508 28.3
Sp2g17200 Schrenkiella parvula HOM05D002627 ORTHO05D002823 1.2e-25 122.5 546 29.1
QL10p013948 Quercus lobata HOM05D002627 ORTHO05D002823 1.5e-25 122.1 529 28.4
Eucgr.J02157 Eucalyptus grandis HOM05D002627 ORTHO05D002823 2.6e-25 121.3 541 28.8
ClCG09G018540 Citrullus lanatus HOM05D002627 ORTHO05D002823 4.2e-23 114.0 531 29.2
Lj2g0010034 Lotus japonicus HOM05D002627 ORTHO05D002823 5.5e-23 113.6 504 28.6
Dinv02653 Davidia involucrata HOM05D002627 ORTHO05D002823 6.1e-22 110.2 535 27.5
Prupe.5G181800 Prunus persica HOM05D002627 ORTHO05D002823 6.7e-21 106.7 529 26.7
arahy.Tifrunner.gnm1.ann1.KN857F Arachis hypogaea HOM05D002627 ORTHO05D002823 3.3e-20 104.4 494 27.1
Lj2g0016402 Lotus japonicus HOM05D002627 ORTHO05D002823 1.7e-19 102.1 495 27.5
CiPaw.11G034000 Carya illinoinensis HOM05D002627 ORTHO05D002823 8.2e-19 99.8 541 28.5
Medtr4g107200 Medicago truncatula HOM05D002627 ORTHO05D002823 1.4e-18 99.0 571 25.7
Aa31LG2G4640 Aethionema arabicum HOM05D002627 ORTHO05D002823 1.5e-17 95.5 539 26.2
MELO3C021486.2 Cucumis melo HOM05D002627 ORTHO05D002823 5.9e-17 93.6 542 26.9
Psat7g131040 Pisum sativum HOM05D002627 ORTHO05D002823 1.7e-16 92.0 468 27.6
Lj5A119G36 Lonicera japonica HOM05D002627 ORTHO05D002823 2.9e-16 91.3 530 25.5
Lj7A404G41 Lonicera japonica HOM05D002627 ORTHO05D002823 5.0e-16 90.5 524 28.2
Sed0010058 Sechium edule HOM05D002627 ORTHO05D002823 8.5e-16 89.7 447 25.7
CsaV3_1G008130 Cucumis sativus L. HOM05D002627 ORTHO05D002823 1.4e-15 89.0 477 24.5
MD14G1189100 Malus domestica HOM05D002627 ORTHO05D002823 1.9e-15 88.6 453 27.4
ClCG01G014180 Citrullus lanatus HOM05D002627 ORTHO05D002823 5.5e-15 87.0 439 25.7
MELO3C002230.2 Cucumis melo HOM05D002627 ORTHO05D002823 7.2e-15 86.7 506 24.5
Atru.chr9.2380 Acer truncatum HOM05D002627 ORTHO05D002823 1.6e-14 85.5 534 26.0
Ca_21874_v3 Cicer arietinum L. HOM05D002627 ORTHO05D002823 2.1e-14 85.1 560 25.7
Nitab4.5_0002875g0040 Nicotiana tabacum HOM05D002627 ORTHO05D002823 2.1e-14 85.1 529 27.4
Sc04g0002230 Simmondsia chinensis HOM05D002627 ORTHO05D002823 2.7e-14 84.7 437 25.6
AL5G18040 Arabidopsis lyrata HOM05D002627 ORTHO05D002823 1.4e-13 82.4 379 29.3
Manes.06G099300 Manihot esculenta HOM05D002627 ORTHO05D002823 1.4e-13 82.4 542 25.1
Nitab4.5_0000642g0200 Nicotiana tabacum HOM05D002627 ORTHO05D002823 1.4e-13 82.4 533 27.8
Oeu018663.2 Olea europaea HOM05D002627 ORTHO05D002823 2.3e-13 81.6 473 26.4
VMungo0464G2062 Vigna mungo HOM05D002627 ORTHO05D002823 2.3e-13 81.6 506 26.5
COL.COLO4_22897 Corchorus olitorius HOM05D002627 ORTHO05D002823 5.2e-13 80.5 533 24.6
Duzib205G0221 Durio zibethinus HOM05D002627 ORTHO05D002823 8.8e-13 79.7 531 25.2
VMungo1215G0528 Vigna mungo HOM05D002627 ORTHO05D002823 3.3e-12 77.8 543 25.0
AUR62021794 Chenopodium quinoa HOM05D002627 ORTHO05D002823 4.4e-12 77.4 584 25.2
AUR62008304 Chenopodium quinoa HOM05D002627 ORTHO05D002823 5.7e-12 77.0 584 24.7
MD06G1183100 Malus domestica HOM05D002627 ORTHO05D002823 7.4e-12 76.6 447 26.0
Glyma.05G032400 Glycine max HOM05D002627 ORTHO05D002823 9.7e-12 76.3 533 25.1
Gohir.D11G031000 Gossypium hirsutum HOM05D002627 ORTHO05D002823 9.7e-12 76.3 539 24.3
PSO591G0190 Papaver somniferum HOM05D002627 ORTHO05D002823 1.3e-11 75.9 538 25.5
Carub.0005s0693 Capsella rubella HOM05D002627 ORTHO05D002823 2.2e-11 75.1 382 25.9
Gohir.A03G076100 Gossypium hirsutum HOM05D002627 ORTHO05D002823 2.8e-11 74.7 448 27.0
PSO832G0166 Papaver somniferum HOM05D002627 ORTHO05D002823 2.8e-11 74.7 534 25.3
CAN.G853.36 Capsicum annuum HOM05D002627 ORTHO05D002823 4.8e-11 73.9 555 27.2
PSO161G0001 Papaver somniferum HOM05D002627 ORTHO05D002823 6.3e-11 73.6 470 26.4
Hma1.2p1_0002F.1_g002970 Hydrangea macrophylla HOM05D002627 ORTHO05D002823 1.1e-10 72.8 249 29.7
GSVIVG01007845001 Vitis vinifera HOM05D002627 ORTHO05D002823 1.4e-10 72.4 211 31.8
PSO478G0854 Papaver somniferum HOM05D002627 ORTHO05D002823 2.4e-10 71.6 470 26.4
TPR.G38438 Trifolium pratense HOM05D002627 ORTHO05D002823 3.1e-10 71.2 602 23.8
Gorai.007G033900 Gossypium raimondii HOM05D002627 ORTHO05D002823 4.1e-10 70.9 536 23.9
Rhsim08G0164100 Rhododendron simsii HOM05D002627 ORTHO05D002823 4.1e-10 70.9 441 25.9
Cc07_g02820 Coffea canephora HOM05D002627 ORTHO05D002823 5.3e-10 70.5 458 25.5
Gohir.D03G089600 Gossypium hirsutum HOM05D002627 ORTHO05D002823 5.3e-10 70.5 448 26.3
Phvul.003G195900 Phaseolus vulgaris HOM05D002627 ORTHO05D002823 5.3e-10 70.5 545 24.6
PGSC0003DMG400024465 Solanum tuberosum HOM05D002627 ORTHO05D002823 7.0e-10 70.1 565 27.4
FAN04G2684 Fragaria x ananassa HOM05D002627 ORTHO05D002823 9.1e-10 69.7 144 37.5
FAN13G1829 Fragaria x ananassa HOM05D002627 ORTHO05D002823 9.1e-10 69.7 144 36.8
Hund13293 Selenicereus undatus HOM05D002627 ORTHO05D002823 9.1e-10 69.7 145 35.2
Aqoxy3G03169 Aquilegia oxysepala HOM05D002627 ORTHO05D002823 1.6e-09 68.9 542 24.4
Gohir.A11G028200 Gossypium hirsutum HOM05D002627 ORTHO05D002823 2.0e-09 68.6 534 24.5
Thecc.03G001600 Theobroma cacao HOM05D002627 ORTHO05D002823 2.6e-09 68.2 527 23.5
Duzib068G0784 Durio zibethinus HOM05D002627 ORTHO05D002823 3.5e-09 67.8 530 24.7
Gorai.003G071800 Gossypium raimondii HOM05D002627 ORTHO05D002823 3.5e-09 67.8 449 25.8
Ciclev10019847m.g Citrus clementina HOM05D002627 ORTHO05D002823 4.5e-09 67.4 525 23.6
Sc11g0006860 Simmondsia chinensis HOM05D002627 ORTHO05D002823 4.5e-09 67.4 337 26.7
Sopen03g032720 Solanum pennellii HOM05D002627 ORTHO05D002823 4.5e-09 67.4 545 26.8
FAN18G0871 Fragaria x ananassa HOM05D002627 ORTHO05D002823 7.7e-09 66.6 45 71.1
FAN08G1526 Fragaria x ananassa HOM05D002627 ORTHO05D002823 1.3e-08 65.9 124 38.7
CSS0010077 Camellia sinensis var. sinensis HOM05D002627 ORTHO05D002823 1.7e-08 65.5 490 23.9
vmacro19345 Vaccinium macrocarpon HOM05D002627 ORTHO05D002823 1.7e-08 65.5 429 25.9
arahy.Tifrunner.gnm1.ann1.AP0627 Arachis hypogaea HOM05D002627 ORTHO05D002823 2.9e-08 64.7 517 24.8
Glyma.17G094200 Glycine max HOM05D002627 ORTHO05D002823 3.8e-08 64.3 448 25.4
Hund02700 Selenicereus undatus HOM05D002627 ORTHO05D002823 3.8e-08 64.3 445 26.3
Peaxi162Scf00017g02214 Petunia axillaris HOM05D002627 ORTHO05D002823 5.0e-08 63.9 552 24.3
CANSAT80G1418 Cannabis sativa HOM05D002627 ORTHO05D002823 6.5e-08 63.5 544 24.3
FvH4_5g16190 Fragaria vesca HOM05D002627 ORTHO05D002823 6.5e-08 63.5 45 66.7
Lj9C455G16 Lonicera japonica HOM05D002627 ORTHO05D002823 1.1e-07 62.8 479 25.9
ATR0624G126 Amborella trichopoda HOM05D002627 ORTHO05D002823 1.5e-07 62.4 433 25.4
EL10Ac2g02900 Beta vulgaris HOM05D002627 ORTHO05D002823 1.9e-07 62.0 138 33.3
DCAR_011177 Daucus carota HOM05D002627 ORTHO05D002823 4.2e-07 60.8 453 23.8
Cc04_g16140 Coffea canephora HOM05D002627 ORTHO05D002823 5.5e-07 60.5 169 31.4
Nitab4.5_0000758g0120 Nicotiana tabacum HOM05D002627 ORTHO05D002823 5.5e-07 60.5 142 31.0
MSTRG.23077 Avicennia marina HOM05D002627 ORTHO05D002823 9.4e-07 59.7 431 23.7
MBI09_g10470_MAGBIO Magnolia biondii HOM05D002627 ORTHO05D002823 9.4e-07 59.7 399 24.3
RcHm_v2.0_Chr7g0179941 Rosa chinensis HOM05D002627 ORTHO05D002823 9.4e-07 59.7 232 28.4
Cpa.g.sc35.14 Carica papaya HOM05D002627 ORTHO05D002823 1.2e-06 59.3 541 25.1
Nitab4.5_0000003g0380 Nicotiana tabacum HOM05D002627 ORTHO05D002823 1.2e-06 59.3 141 31.2
Lalb_Chr12g0201291 Lupinus albus HOM05D002627 ORTHO05D002823 1.6e-06 58.9 485 25.2
Aqoxy3G00856 Aquilegia oxysepala HOM05D002627 ORTHO05D002823 2.1e-06 58.5 537 23.1
Actinidia34968 Actinidia chinensis HOM05D002627 ORTHO05D002823 3.6e-06 57.8 587 23.3
AUR62021791 Chenopodium quinoa HOM05D002627 ORTHO05D002823 3.6e-06 57.8 88 42.0
Thhalv10005462m.g Eutrema salsugineum HOM05D002627 ORTHO05D002823 3.6e-06 57.8 223 29.1
arahy.Tifrunner.gnm1.ann1.N6T05M Arachis hypogaea HOM05D002627 ORTHO05D002823 4.7e-06 57.4 473 25.6
Lalb_Chr13g0298031 Lupinus albus HOM05D002627 ORTHO05D002823 6.1e-06 57.0 513 24.6


User provided reference genes

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