Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G272200 Prunus persica HOM05D008333 ORTHO05D010371 5.2e-96 354.4 177 100.0
RcHm_v2.0_Chr2g0169181 Rosa chinensis HOM05D008333 ORTHO05D010371 4.2e-37 158.7 169 49.7
FvH4_6g49300 Fragaria vesca HOM05D008333 ORTHO05D010371 3.5e-36 155.6 171 51.5
FvH4_6g49320 Fragaria vesca HOM05D008333 ORTHO05D010371 7.9e-36 154.5 171 50.9
FAN14G5614 Fragaria x ananassa HOM05D008333 ORTHO05D010371 7.9e-36 154.5 171 50.9
FAN14G1695 Fragaria x ananassa HOM05D008333 ORTHO05D010371 1.7e-35 153.3 186 48.4
FAN14G3781 Fragaria x ananassa HOM05D000349 ORTHO05D001782 3.0e-35 152.5 171 50.9
RcHm_v2.0_Chr2g0169171 Rosa chinensis HOM05D008333 ORTHO05D010371 5.1e-35 151.8 141 55.3
Potri.017G077100 Populus trichocarpa HOM05D008333 ORTHO05D010371 9.3e-29 131.0 148 49.3
Cfa021167 Carpinus fangiana HOM05D008333 ORTHO05D010371 1.1e-26 124.0 133 47.4
Haze_14585 Corylus avellana HOM05D008333 ORTHO05D010371 2.5e-26 122.9 134 48.5
QL02p080535 Quercus lobata HOM05D008333 ORTHO05D010371 4.3e-26 122.1 128 47.7
Manes.17G020900 Manihot esculenta HOM05D008333 ORTHO05D010371 1.1e-24 117.5 137 47.4
COL.COLO4_25183 Corchorus olitorius HOM05D008333 ORTHO05D010371 3.4e-23 112.5 146 42.5
Cfa007508 Carpinus fangiana HOM05D008333 ORTHO05D010371 1.4e-21 107.1 138 44.2
CiPaw.03G030300 Carya illinoinensis HOM05D008333 ORTHO05D010371 9.3e-21 104.4 141 41.8
Duzib147G0630 Durio zibethinus HOM05D008333 ORTHO05D010371 9.3e-21 104.4 153 40.5
CSS0029447 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.0e-19 100.9 141 39.7
CSS0048142 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 1.0e-19 100.9 141 39.7
Thecc.04G074300 Theobroma cacao HOM05D008333 ORTHO05D010371 2.3e-19 99.8 134 41.0
Gorai.006G024100 Gossypium raimondii HOM05D008333 ORTHO05D010371 3.9e-19 99.0 167 37.1
Gohir.A09G021000 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.6e-17 93.6 143 39.9
FAN02G4458 Fragaria x ananassa HOM05D008333 ORTHO05D010371 1.1e-16 90.9 171 38.0
Gohir.D09G020400 Gossypium hirsutum HOM05D008333 ORTHO05D010371 2.4e-16 89.7 146 37.7
Gorai.006G023800 Gossypium raimondii HOM05D008333 ORTHO05D010371 5.3e-16 88.6 121 40.5
Lj7P401T71 Lonicera japonica HOM05D008333 ORTHO05D010371 5.3e-16 88.6 130 39.2
Glyma.18G255500 Glycine max HOM05D008333 ORTHO05D010371 2.0e-15 86.7 162 32.1
VMungo0464G0738 Vigna mungo HOM05D008333 ORTHO05D010371 4.5e-15 85.5 138 35.5
CSS0005469 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 3.8e-14 82.4 142 38.7
Gorai.007G297900 Gossypium raimondii HOM05D008333 ORTHO05D010371 5.0e-14 82.0 128 39.1
Eucgr.I01914 Eucalyptus grandis HOM05D008333 ORTHO05D010371 6.5e-14 81.6 116 35.3
Gohir.D11G275775 Gossypium hirsutum HOM05D008333 ORTHO05D010371 8.4e-14 81.3 104 41.3
Eucgr.L02760 Eucalyptus grandis HOM05D008333 ORTHO05D010371 1.4e-13 80.5 116 34.5
Phvul.004G025900 Phaseolus vulgaris HOM05D008333 ORTHO05D010371 2.5e-13 79.7 156 30.1
Rhsim08G0065300 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.2e-13 79.3 141 36.9
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 4.2e-13 79.0 129 38.0
Actinidia38746 Actinidia chinensis HOM05D008333 ORTHO05D010371 5.5e-13 78.6 140 34.3
Rhsim08G0065700 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.5e-13 78.6 129 37.2
PGSC0003DMG400016257 Solanum tuberosum HOM05D008333 ORTHO05D010371 9.3e-13 77.8 111 38.7
Sopen04g006510 Solanum pennellii HOM05D008333 ORTHO05D010371 1.2e-12 77.4 114 32.5
TPR.G7262 Trifolium pratense HOM05D008333 ORTHO05D010371 2.1e-12 76.6 129 34.9
Eucgr.I01916 Eucalyptus grandis HOM05D008333 ORTHO05D010371 2.7e-12 76.3 116 36.2
Rhsim08G0065600 Rhododendron simsii HOM05D008333 ORTHO05D010371 2.7e-12 76.3 133 36.1
Rhsim08G0065000 Rhododendron simsii HOM05D008333 ORTHO05D010371 4.6e-12 75.5 132 36.4
Rhsim08G0065200 Rhododendron simsii HOM05D008333 ORTHO05D010371 4.6e-12 75.5 133 35.3
Rhsim08G0066000 Rhododendron simsii HOM05D008333 ORTHO05D010371 7.9e-12 74.7 126 36.5
Rhsim08G0065800 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.3e-11 73.9 126 38.1
Rhsim08G0065500 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.0e-11 72.8 129 34.9
Rhsim08G0065900 Rhododendron simsii HOM05D008333 ORTHO05D010371 5.1e-11 72.0 129 34.9
TAR481G0008 Trochodendron aralioides HOM05D008333 ORTHO05D010371 5.1e-11 72.0 158 29.7
Gohir.D09G020550 Gossypium hirsutum HOM05D008333 ORTHO05D010371 8.7e-11 71.2 110 39.1
Gohir.A11G265601 Gossypium hirsutum HOM05D008333 ORTHO05D010371 1.5e-10 70.5 87 42.5
Rhsim08G0065400 Rhododendron simsii HOM05D008333 ORTHO05D010371 1.9e-10 70.1 126 35.7
TAR481G0013 Trochodendron aralioides HOM05D008333 ORTHO05D010371 2.5e-10 69.7 155 29.7
CSS0007512 Camellia sinensis var. sinensis HOM05D008333 ORTHO05D010371 4.3e-10 68.9 144 35.4
TAR371G0090 Trochodendron aralioides HOM05D008333 ORTHO05D010371 4.3e-10 68.9 110 35.5
Nn4g23042 Nelumbo nucifera HOM05D008333 ORTHO05D010371 1.3e-09 67.4 134 32.8
Lsat_1_v5_gn_4_179800 Lactuca sativa HOM05D019919 ORTHO05D010371 5.3e-08 62.0 102 32.4
MBI03_g32214_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 2.0e-07 60.1 128 31.2
Nn3g17126 Nelumbo nucifera HOM05D008333 ORTHO05D010371 2.6e-07 59.7 149 27.5
Gorai.006G024300 Gossypium raimondii HOM05D008333 ORTHO05D010371 7.7e-07 58.2 83 36.1
MBI03_g35364_MAGBIO Magnolia biondii HOM05D011927 ORTHO05D010887 8.5e-06 54.7 128 32.8


User provided reference genes

Program Settings