Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G266100 Prunus persica HOM05D008206 ORTHO05D010320 4.4e-42 174.1 81 100.0
MD00G1125200 Malus domestica HOM05D008206 ORTHO05D010320 1.5e-29 132.5 82 79.3
MD09G1052600 Malus domestica HOM05D008206 ORTHO05D010320 6.8e-27 123.6 82 76.8
FAN09G1639 Fragaria x ananassa HOM05D008206 ORTHO05D010320 5.9e-23 110.5 80 67.5
FvH4_6g48260 Fragaria vesca HOM05D008206 ORTHO05D010320 1.7e-22 109.0 80 66.2
FAN02G1369 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.7e-22 109.0 80 66.2
FAN05G0177 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.7e-22 109.0 80 66.2
FAN05G4857 Fragaria x ananassa HOM05D008206 ORTHO05D010320 1.7e-22 109.0 80 66.2
FAN14G5696 Fragaria x ananassa HOM05D008206 ORTHO05D010320 2.3e-22 108.6 80 66.2
RcHm_v2.0_Chr2g0167761 Rosa chinensis HOM05D008206 ORTHO05D010320 6.6e-22 107.1 81 64.2
CiPaw.03G025300 Carya illinoinensis HOM05D008206 ORTHO05D010320 3.1e-19 98.2 80 57.5
Haze_14514 Corylus avellana HOM05D008206 ORTHO05D010320 1.3e-17 92.8 76 57.9
Cfa007572 Carpinus fangiana HOM05D008206 ORTHO05D010320 3.7e-17 91.3 76 57.9
GSVIVG01011434001 Vitis vinifera HOM05D008206 ORTHO05D010320 2.4e-16 88.6 78 52.6
Thecc.04G084200 Theobroma cacao HOM05D008206 ORTHO05D010320 9.2e-16 86.7 78 53.8
Thecc.04G083900 Theobroma cacao HOM05D008206 ORTHO05D010320 2.7e-15 85.1 78 53.8
Cpa.g.sc14.94 Carica papaya HOM05D008206 ORTHO05D010320 3.5e-15 84.7 77 50.6
TAR629G1342 Trochodendron aralioides HOM05D008206 ORTHO05D010320 4.6e-15 84.3 77 51.9
CiPaw.04G016300 Carya illinoinensis HOM05D008206 ORTHO05D010320 1.0e-14 83.2 78 50.0
Gohir.A10G100200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 2.3e-14 82.0 79 53.2
Manes.02G047166 Manihot esculenta HOM05D008206 ORTHO05D010320 3.9e-14 81.3 79 51.9
Gohir.D11G074000 Gossypium hirsutum HOM05D008206 ORTHO05D010320 5.0e-14 80.9 80 48.8
Gorai.007G079400 Gossypium raimondii HOM05D008206 ORTHO05D010320 5.0e-14 80.9 80 48.8
Gorai.011G097200 Gossypium raimondii HOM05D008206 ORTHO05D010320 6.6e-14 80.5 79 50.6
Gohir.A11G070300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 3.3e-13 78.2 80 48.8
Gorai.008G139600 Gossypium raimondii HOM05D008206 ORTHO05D010320 3.3e-13 78.2 80 43.8
Gohir.D10G088300 Gossypium hirsutum HOM05D008206 ORTHO05D010320 8.1e-12 73.6 79 49.4
Ciclev10013233m.g Citrus clementina HOM05D008206 ORTHO05D010320 2.3e-11 72.0 84 44.0
ClCG10G015200 Citrullus lanatus HOM05D008206 ORTHO05D010320 3.1e-11 71.6 83 47.0
CANSAT64G2007 Cannabis sativa HOM05D008206 ORTHO05D010320 4.0e-11 71.2 84 47.6
Gohir.D12G128666 Gossypium hirsutum HOM05D008206 ORTHO05D010320 5.2e-11 70.9 79 45.6
Manes.01G092200 Manihot esculenta HOM05D008206 ORTHO05D010320 5.2e-11 70.9 80 46.2
TPR.G28906 Trifolium pratense HOM05D008206 ORTHO05D010320 1.5e-10 69.3 80 45.0
Medtr7g010980 Medicago truncatula HOM05D008206 ORTHO05D010320 4.4e-10 67.8 77 45.5
Sed0002436 Sechium edule HOM05D008206 ORTHO05D010320 5.8e-10 67.4 85 48.2
CsaV3_3G041320 Cucumis sativus L. HOM05D008206 ORTHO05D010320 7.5e-10 67.0 85 47.1
Nn4g23199 Nelumbo nucifera HOM05D008206 ORTHO05D010320 1.7e-09 65.9 79 44.3
Aqoxy3G03425 Aquilegia oxysepala HOM05D008206 ORTHO05D010320 2.2e-09 65.5 84 47.6
Psat3g197800 Pisum sativum HOM05D008206 ORTHO05D010320 6.4e-09 63.9 81 46.9
Nn3g17269 Nelumbo nucifera HOM05D008206 ORTHO05D010320 8.3e-09 63.5 78 43.6
Potri.004G122800 Populus trichocarpa HOM05D008206 ORTHO05D010320 1.4e-08 62.8 81 46.9
Phvul.008G037100 Phaseolus vulgaris HOM05D008206 ORTHO05D010320 1.9e-08 62.4 77 44.2
Dinv33772 Davidia involucrata HOM05D008206 ORTHO05D010320 2.4e-08 62.0 84 41.7
Potri.017G084700 Populus trichocarpa HOM05D008206 ORTHO05D010320 5.4e-08 60.8 79 45.6
Actinidia17551 Actinidia chinensis HOM05D008206 ORTHO05D010320 9.2e-08 60.1 82 40.2
Sabra17G0074600 Salix brachista HOM05D008206 ORTHO05D010320 9.2e-08 60.1 81 44.4
Eucgr.J01355 Eucalyptus grandis HOM05D008206 ORTHO05D010320 1.2e-07 59.7 68 44.1
CDE02G3745 Ceratophyllum demersum HOM05D002107 ORTHO05D002067 2.1e-07 58.9 82 40.2
Actinidia26223 Actinidia chinensis HOM05D008206 ORTHO05D010320 2.7e-07 58.5 79 43.0
CSS0033569 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 4.6e-07 57.8 81 44.4
ClCG09G018150 Citrullus lanatus HOM05D041357 ORTHO05D010320 4.6e-07 57.8 83 44.6
CSS0025041 Camellia sinensis var. sinensis HOM05D008206 ORTHO05D010320 7.8e-07 57.0 81 44.4
arahy.Tifrunner.gnm1.ann1.BDSN0J Arachis hypogaea HOM05D008206 ORTHO05D010320 1.0e-06 56.6 76 36.8
COL.COLO4_10319 Corchorus olitorius HOM05D008206 ORTHO05D010320 1.3e-06 56.2 50 52.0
Migut.K01319 Erythranthe guttata HOM05D008206 ORTHO05D010320 1.3e-06 56.2 75 38.7
Sc10g0003520 Simmondsia chinensis HOM05D008206 ORTHO05D010320 1.3e-06 56.2 69 44.9
CsaV3_5G038110 Cucumis sativus L. HOM05D041357 ORTHO05D010320 1.7e-06 55.8 76 42.1
Gohir.D11G074200 Gossypium hirsutum HOM05D008206 ORTHO05D010320 6.6e-06 53.9 74 37.8
ATR0564G274 Amborella trichopoda HOM05D008206 ORTHO05D010320 8.6e-06 53.5 86 37.2


User provided reference genes

Program Settings