Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 2.3e-190 668.7 332 100.0
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 1.0e-182 643.3 332 96.1
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.8e-182 642.5 332 94.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 3.7e-180 634.8 332 93.4
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.7e-180 634.8 332 93.4
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 3.7e-180 634.8 332 93.4
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 4.9e-180 634.4 332 93.4
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 6.3e-180 634.0 332 92.8
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.1e-179 633.3 332 93.4
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 9.2e-179 630.2 332 93.4
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.2e-178 629.8 332 92.5
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 1.2e-178 629.8 332 92.2
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.0e-178 629.0 332 93.4
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 2.7e-178 628.6 332 93.1
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 3.5e-178 628.2 332 91.9
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 5.9e-178 627.5 331 92.4
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 1.3e-177 626.3 332 93.1
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 3.8e-177 624.8 331 91.5
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 6.6e-177 624.0 331 91.5
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.1e-176 623.2 331 91.8
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 1.9e-176 622.5 332 91.9
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 3.3e-176 621.7 335 91.3
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 5.6e-176 620.9 332 91.9
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 9.5e-176 620.2 332 91.0
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 9.5e-176 620.2 331 90.9
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 1.2e-175 619.8 332 91.3
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 2.1e-175 619.0 332 91.3
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.8e-175 618.6 332 90.4
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.8e-175 618.6 350 87.7
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.8e-175 618.6 350 87.7
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 4.7e-175 617.8 332 91.0
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 4.7e-175 617.8 331 90.6
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 6.1e-175 617.5 331 91.5
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 8.0e-175 617.1 332 91.6
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 8.0e-175 617.1 331 90.0
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.8e-174 615.9 332 91.0
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.8e-174 615.9 332 89.8
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 2.3e-174 615.5 332 90.4
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 2.3e-174 615.5 332 90.7
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 4.0e-174 614.8 348 87.1
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 5.2e-174 614.4 332 90.1
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 5.2e-174 614.4 332 90.7
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 8.9e-174 613.6 331 89.7
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.5e-173 612.8 331 90.3
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 2.6e-173 612.1 332 89.5
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 4.4e-173 611.3 332 89.5
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 9.8e-173 610.1 332 89.5
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 1.3e-172 609.8 332 89.8
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.7e-172 609.4 331 90.0
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 1.7e-172 609.4 332 90.4
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.7e-172 609.4 332 89.5
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 2.2e-172 609.0 332 90.4
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 2.2e-172 609.0 353 86.4
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 2.2e-172 609.0 332 89.2
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 2.2e-172 609.0 332 88.9
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 2.2e-172 609.0 332 89.5
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 3.7e-172 608.2 331 90.0
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 3.7e-172 608.2 332 89.5
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 3.7e-172 608.2 332 90.1
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 4.9e-172 607.8 332 89.2
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 4.9e-172 607.8 332 89.5
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 8.3e-172 607.1 332 89.2
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 8.3e-172 607.1 331 89.7
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 2.4e-171 605.5 331 89.7
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 2.4e-171 605.5 332 89.2
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 4.1e-171 604.7 332 88.6
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 4.1e-171 604.7 332 89.5
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 7.0e-171 604.0 330 89.4
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 7.0e-171 604.0 332 89.5
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 7.0e-171 604.0 330 89.7
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 9.2e-171 603.6 332 91.0
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 2.0e-170 602.4 331 89.7
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 2.7e-170 602.1 331 89.4
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 1.0e-169 600.1 332 89.2
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.7e-169 599.4 332 88.3
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 3.0e-169 598.6 332 88.9
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 7.3e-168 594.0 333 88.6
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 9.5e-168 593.6 332 85.8
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 1.2e-167 593.2 333 88.6
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 1.6e-167 592.8 336 86.0
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 2.8e-167 592.0 332 85.8
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 6.2e-167 590.9 332 87.3
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 3.1e-166 588.6 332 85.2
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.2e-164 582.4 330 85.8
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 6.4e-164 580.9 347 84.1
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 6.0e-162 574.3 331 84.6
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 9.2e-155 550.4 336 82.7
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 3.0e-153 545.4 332 82.8
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 6.6e-153 544.3 339 80.8
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.5e-152 542.3 332 82.2
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 2.1e-151 539.3 332 78.6
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 6.4e-148 527.7 330 82.1
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.8e-142 509.6 279 89.2
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.1e-138 496.1 333 73.0
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 1.3e-137 493.4 333 73.3
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.9e-137 491.9 331 71.3
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 5.1e-129 464.9 330 68.8
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.9e-128 463.0 334 74.3
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.3e-127 460.3 332 72.0
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 5.3e-126 454.9 332 72.6
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 1.1e-123 447.2 233 92.7
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.4e-123 446.8 233 91.8
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 1.4e-123 446.8 232 94.0
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.1e-120 437.2 308 73.7
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 4.9e-116 421.8 354 61.6
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 2.2e-108 396.4 213 89.2
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 6.5e-100 368.2 242 81.4
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.7e-98 362.8 195 88.2
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.7e-98 362.8 185 93.0
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.7e-98 362.8 185 93.0
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.1e-97 358.6 292 66.8
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 5.1e-97 358.6 190 92.1
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 4.2e-91 339.0 361 47.9
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.2e-56 224.6 266 44.0
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 7.0e-54 215.3 286 42.7
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.5e-48 197.6 117 83.8
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.7e-47 194.1 363 36.4
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 3.5e-45 186.4 102 87.3
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.3e-43 179.9 343 36.4
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 4.7e-42 176.0 100 87.0
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 5.2e-41 172.6 290 35.9
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.1e-38 164.9 96 86.5
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 2.4e-38 163.7 310 34.8
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 4.6e-37 159.5 313 32.6
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 1.7e-20 104.4 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 8.4e-15 85.5 45 97.8
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 4.0e-09 66.6 136 33.1
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 5.3e-09 66.2 38 86.8
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.2e-08 65.1 42 78.6
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 5.5e-06 56.2 26 88.5
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 7.1e-06 55.8 27 88.9


User provided reference genes

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