Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 2.4e-147 525.4 250 100.0
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 1.6e-127 459.5 249 85.1
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 8.0e-127 457.2 250 85.6
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 3.0e-126 455.3 250 83.6
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.0e-126 455.3 250 83.6
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 5.7e-125 451.1 250 82.8
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 4.9e-124 448.0 250 82.8
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 4.9e-124 448.0 250 82.4
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 1.2e-122 443.4 250 81.2
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 7.7e-122 440.7 248 81.0
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 1.0e-121 440.3 250 81.2
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.3e-121 439.1 250 80.4
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.8e-121 438.3 250 80.4
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 3.8e-121 438.3 250 80.4
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 8.6e-121 437.2 250 82.8
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 8.6e-121 437.2 250 79.6
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 1.1e-120 436.8 250 79.6
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.9e-120 436.0 250 79.6
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 6.1e-119 431.0 250 79.6
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 1.5e-117 426.4 250 78.8
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 2.6e-117 425.6 250 77.2
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 3.4e-117 425.2 250 76.8
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.4e-117 424.9 250 76.8
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 4.1e-115 418.3 250 76.4
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 7.8e-114 414.1 250 75.2
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 3.0e-113 412.1 251 74.5
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 3.0e-113 412.1 251 74.5
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 3.9e-113 411.8 251 75.3
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 6.6e-113 411.0 250 75.6
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 1.9e-112 409.5 252 75.0
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 3.3e-112 408.7 252 74.6
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 3.3e-112 408.7 250 75.2
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 3.3e-112 408.7 251 74.9
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 5.6e-112 407.9 251 73.7
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 7.3e-112 407.5 250 74.4
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 7.3e-112 407.5 251 73.3
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 1.6e-111 406.4 250 76.4
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 2.8e-111 405.6 251 72.9
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 3.6e-111 405.2 251 73.3
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 4.7e-111 404.8 250 74.8
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 8.0e-111 404.1 252 74.6
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.4e-110 403.3 252 74.6
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 3.1e-110 402.1 251 72.1
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 4.0e-110 401.7 250 74.0
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 2.6e-109 399.1 250 71.6
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 2.6e-109 399.1 250 73.2
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 3.4e-109 398.7 250 71.6
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.4e-109 398.7 250 71.2
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.4e-109 398.3 250 72.0
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 5.8e-109 397.9 252 73.8
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 9.8e-109 397.1 254 73.2
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 2.9e-108 395.6 250 72.4
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 8.3e-108 394.0 252 72.6
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 8.3e-108 394.0 252 73.8
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.4e-107 393.3 252 71.0
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.9e-107 392.9 250 72.4
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 1.9e-107 392.9 252 73.0
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 9.2e-107 390.6 252 73.0
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 3.5e-106 388.7 250 70.8
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 2.3e-105 386.0 250 74.8
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 3.0e-105 385.6 250 68.4
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 1.1e-104 383.6 250 67.6
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 1.1e-104 383.6 249 67.9
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 4.3e-104 381.7 250 70.0
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 7.3e-104 380.9 252 71.0
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 1.4e-102 376.7 250 68.4
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 1.8e-102 376.3 250 70.4
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 1.8e-102 376.3 228 75.4
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 1.8e-102 376.3 250 68.4
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 1.8e-102 376.3 250 72.4
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 4.0e-102 375.2 250 69.2
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 8.3e-100 367.5 250 67.2
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 7.1e-99 364.4 252 66.3
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 7.1e-99 364.4 252 66.3
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 7.1e-99 364.4 252 66.3
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 7.1e-99 364.4 252 66.3
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.2e-98 363.6 253 67.2
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 2.1e-98 362.8 252 65.5
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 2.7e-98 362.5 252 65.9
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 3.5e-98 362.1 249 67.1
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 3.9e-97 358.6 252 66.3
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 5.1e-97 358.2 252 65.9
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 1.9e-96 356.3 245 67.3
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.5e-96 355.9 252 65.5
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 4.3e-96 355.1 262 66.0
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 7.3e-96 354.4 245 66.9
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 9.5e-96 354.0 252 65.9
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 9.5e-96 354.0 252 65.1
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 4.7e-95 351.7 250 62.8
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 1.1e-94 350.5 250 64.4
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 1.8e-94 349.7 252 63.9
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 3.1e-94 349.0 250 62.4
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 4.4e-93 345.1 251 63.7
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 3.8e-92 342.0 251 64.5
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 8.4e-92 340.9 199 77.4
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 8.6e-89 330.9 249 59.8
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 2.5e-88 329.3 238 63.4
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 3.3e-88 328.9 250 58.4
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 6.2e-87 324.7 240 58.8
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 2.8e-79 299.3 245 59.2
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.6e-77 292.7 247 57.9
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 3.4e-77 292.4 248 56.0
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 7.6e-77 291.2 247 57.5
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 5.4e-75 285.0 247 54.3
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 4.3e-72 275.4 154 79.2
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 9.6e-72 274.2 250 50.4
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 2.8e-63 246.1 267 46.8
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 3.1e-62 242.7 251 46.6
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 7.6e-61 238.0 139 81.3
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 2.8e-55 219.5 287 44.9
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.4e-51 207.2 261 46.4
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 3.0e-49 199.5 111 79.3
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 1.1e-43 181.0 99 86.9
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 8.8e-33 144.8 95 71.6
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 4.2e-27 125.9 100 63.0
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 3.1e-22 109.8 70 62.9
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 4.1e-22 109.4 161 42.9
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 7.7e-21 105.1 55 80.0
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 1.6e-18 97.4 49 81.6
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 3.5e-13 79.7 45 80.0
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 3.7e-07 59.7 106 36.8


User provided reference genes

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