Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 2.7e-67 258.5 126 100.0
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 2.1e-43 179.1 122 77.0
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 4.7e-43 177.9 127 75.6
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 6.8e-42 174.1 127 76.4
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 4.9e-40 167.9 122 73.8
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.4e-39 166.4 122 73.8
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 9.2e-39 163.7 114 76.3
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.5e-36 156.4 120 72.5
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.6e-35 152.9 128 66.4
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 2.8e-27 125.6 104 66.3
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 2.8e-27 125.6 96 68.8
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 1.1e-26 123.6 104 65.4
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 6.4e-24 114.4 105 62.9
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 1.1e-23 113.6 98 67.3
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.1e-23 113.6 97 67.0
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 1.1e-23 113.6 85 69.4
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 3.2e-23 112.1 113 60.2
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 3.2e-23 112.1 87 63.2
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 3.2e-23 112.1 114 57.9
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 9.3e-23 110.5 107 60.7
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 9.3e-23 110.5 84 71.4
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 1.2e-22 110.2 83 66.3
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 1.6e-22 109.8 81 72.8
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 4.6e-22 108.2 109 62.4
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 1.0e-21 107.1 69 78.3
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 1.3e-21 106.7 76 73.7
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 1.3e-21 106.7 74 77.0
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 2.3e-21 105.9 104 58.7
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 2.3e-21 105.9 106 62.3
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 3.9e-21 105.1 116 59.5
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 6.6e-21 104.4 119 56.3
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 8.7e-21 104.0 96 61.5
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 1.1e-20 103.6 104 57.7
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 1.1e-20 103.6 98 63.3
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 1.5e-20 103.2 105 57.1
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 1.9e-20 102.8 104 57.7
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 4.3e-20 101.7 99 62.6
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 5.6e-20 101.3 99 62.6
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 5.6e-20 101.3 111 63.1
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 7.3e-20 100.9 63 77.8
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.6e-19 99.8 85 68.2
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 2.1e-19 99.4 86 59.3
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 3.6e-19 98.6 115 56.5
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 3.6e-19 98.6 100 57.0
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 6.2e-19 97.8 78 67.9
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 8.1e-19 97.4 87 58.6
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 1.1e-18 97.1 75 70.7
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 1.1e-18 97.1 101 56.4
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 1.1e-18 97.1 78 62.8
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 1.4e-18 96.7 112 52.7
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 3.1e-18 95.5 66 69.7
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 1.2e-17 93.6 96 55.2
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 2.0e-17 92.8 120 50.0
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 1.7e-16 89.7 109 53.2
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 4.9e-16 88.2 98 56.1
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 6.4e-16 87.8 72 66.7
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 1.1e-15 87.0 90 57.8
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 2.4e-15 85.9 100 51.0
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 3.2e-15 85.5 101 52.5
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 4.2e-15 85.1 115 47.8
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 4.2e-15 85.1 60 73.3
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 4.2e-15 85.1 60 73.3
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 5.4e-15 84.7 105 52.4
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 7.1e-15 84.3 81 59.3
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 7.1e-15 84.3 120 45.8
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 7.1e-15 84.3 94 53.2
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 1.6e-14 83.2 98 52.0
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 1.6e-14 83.2 124 46.0
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.6e-14 83.2 60 71.7
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 1.6e-14 83.2 76 61.8
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 1.6e-14 83.2 76 61.8
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.6e-14 83.2 100 55.0
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 2.1e-14 82.8 98 51.0
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 2.1e-14 82.8 101 52.5
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 2.7e-14 82.4 118 46.6
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 6.0e-14 81.3 61 73.8
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 1.0e-13 80.5 94 52.1
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 1.0e-13 80.5 112 49.1
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 1.3e-13 80.1 91 52.7
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 1.3e-13 80.1 80 56.2
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 1.3e-13 80.1 80 56.2
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 1.3e-13 80.1 80 56.2
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 1.3e-13 80.1 67 61.2
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.7e-13 79.7 103 48.5
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 1.7e-13 79.7 80 58.8
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 1.7e-13 79.7 85 58.8
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 3.0e-13 79.0 88 53.4
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 6.6e-13 77.8 49 79.6
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.1e-12 77.0 47 76.6
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 3.3e-12 75.5 119 41.2
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 3.3e-12 75.5 105 42.9
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 3.3e-12 75.5 95 52.6
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 4.3e-12 75.1 73 57.5
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 4.3e-12 75.1 59 61.0
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 5.6e-12 74.7 125 45.6
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 7.4e-12 74.3 72 55.6
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 7.4e-12 74.3 47 76.6
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 9.6e-12 73.9 65 61.5
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 1.3e-11 73.6 86 52.3
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 2.8e-11 72.4 63 60.3
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 3.6e-11 72.0 76 50.0
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 8.1e-11 70.9 116 43.1
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 3.1e-10 68.9 72 56.9
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 1.2e-09 67.0 53 66.0
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 9.9e-09 63.9 87 47.1
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 9.9e-09 63.9 58 62.1
Peaxi162Scf00025g00208 Petunia axillaris HOM05D006882 ORTHO05D008688 1.7e-08 63.2 53 64.2
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 1.4e-07 60.1 43 67.4
Lsat_1_v5_gn_4_172620 Lactuca sativa HOM05D006882 ORTHO05D048217 7.1e-07 57.8 63 50.8
CDE04G1794 Ceratophyllum demersum HOM05D006882 ORTHO05D008688 9.3e-07 57.4 34 67.6
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 2.7e-06 55.8 69 46.4
arahy.Tifrunner.gnm1.ann1.K9PA59 Arachis hypogaea HOM05D006882 ORTHO05D008688 6.0e-06 54.7 29 82.8
HanXRQChr09g0272731 Helianthus annuus HOM05D006882 ORTHO05D048217 7.9e-06 54.3 66 47.0


User provided reference genes

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