Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 4.7e-91 337.8 167 100.0
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 1.0e-61 240.4 157 79.0
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 2.4e-58 229.2 167 74.3
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 4.9e-56 221.5 167 70.1
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 3.3e-52 208.8 155 72.9
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 3.7e-51 205.3 162 64.2
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 8.2e-51 204.1 158 70.3
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 6.0e-46 188.0 167 61.1
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 6.7e-45 184.5 167 59.9
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 1.1e-44 183.7 157 59.9
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 3.3e-44 182.2 167 56.3
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 2.2e-43 179.5 167 60.5
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 4.8e-43 178.3 160 59.4
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 6.3e-43 177.9 168 61.9
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 6.3e-43 177.9 168 61.9
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 2.4e-42 176.0 168 58.3
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 4.1e-42 175.3 111 80.2
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 5.3e-42 174.9 157 58.0
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 1.5e-41 173.3 167 57.5
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 4.5e-41 171.8 157 61.1
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.0e-40 170.6 94 87.2
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.0e-40 170.6 94 87.2
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.3e-40 170.2 94 87.2
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 2.2e-40 169.5 143 60.8
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 2.9e-40 169.1 157 57.3
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 6.5e-40 167.9 157 56.1
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 8.5e-40 167.5 157 57.3
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 3.6e-38 162.2 167 56.3
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 4.6e-38 161.8 157 54.8
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 6.1e-38 161.4 167 53.9
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 2.3e-37 159.5 157 55.4
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 2.3e-37 159.5 167 53.3
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 2.3e-37 159.5 161 52.8
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 3.9e-37 158.7 158 57.0
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 5.1e-37 158.3 141 58.2
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 5.1e-37 158.3 135 63.7
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 5.1e-37 158.3 148 57.4
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 6.7e-37 157.9 164 51.8
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 1.5e-36 156.8 120 65.8
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.9e-36 156.4 170 49.4
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 3.3e-36 155.6 161 53.4
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 3.3e-36 155.6 162 53.7
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 4.3e-36 155.2 157 52.9
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 7.4e-36 154.5 160 52.5
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 9.7e-36 154.1 160 50.6
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 9.7e-36 154.1 160 50.6
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 1.1e-34 150.6 160 50.0
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 1.1e-34 150.6 160 50.0
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 1.1e-34 150.6 126 64.3
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 1.4e-34 150.2 92 73.9
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 1.8e-34 149.8 131 56.5
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.4e-34 149.4 153 54.9
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 2.4e-34 149.4 131 57.3
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 9.1e-34 147.5 140 54.3
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 1.2e-33 147.1 159 50.3
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 1.2e-33 147.1 160 50.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.2e-33 147.1 159 54.7
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 2.0e-33 146.4 163 47.2
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 2.0e-33 146.4 154 52.6
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 7.7e-33 144.4 165 50.9
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 7.7e-33 144.4 90 74.4
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 7.7e-33 144.4 130 58.5
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 1.3e-32 143.7 166 49.4
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 1.3e-32 143.7 172 48.3
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 2.2e-32 142.9 124 57.3
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 2.9e-32 142.5 112 63.4
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 2.9e-32 142.5 157 53.5
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 5.0e-32 141.7 99 69.7
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.1e-31 140.6 94 71.3
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 1.9e-31 139.8 142 54.2
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.2e-31 138.7 135 58.5
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 4.2e-31 138.7 135 58.5
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 4.2e-31 138.7 99 66.7
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 9.4e-31 137.5 94 68.1
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 1.6e-30 136.7 93 68.8
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 1.6e-30 136.7 94 69.1
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.1e-30 136.3 98 65.3
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 4.7e-30 135.2 87 74.7
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.7e-30 135.2 113 61.1
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 4.7e-30 135.2 167 47.9
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 6.1e-30 134.8 97 64.9
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 5.1e-29 131.7 112 58.0
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 5.1e-29 131.7 163 47.2
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 2.0e-28 129.8 80 76.2
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 2.0e-28 129.8 82 74.4
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.6e-28 129.4 79 74.7
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 3.3e-28 129.0 88 71.6
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 4.4e-28 128.6 157 47.1
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 2.2e-27 126.3 93 63.4
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-23 114.0 160 43.1
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-23 114.0 160 43.1
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 7.2e-23 111.3 111 51.4
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 1.6e-22 110.2 86 57.0
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 6.1e-22 108.2 109 50.5
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 8.0e-22 107.8 86 54.7
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.0e-20 103.2 82 54.9
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 5.7e-20 101.7 80 58.8
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.1e-18 97.4 76 60.5
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 4.1e-18 95.5 89 52.8
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 6.7e-13 78.2 64 57.8
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 1.0e-08 64.3 49 61.2


User provided reference genes

Program Settings