Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 2.7e-98 362.1 196 100.0
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 5.0e-84 314.7 196 85.2
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 1.2e-80 303.5 182 83.5
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 5.0e-76 288.1 172 81.4
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 5.2e-73 278.1 172 80.2
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 5.2e-73 278.1 172 80.2
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.4e-72 275.0 166 80.7
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 5.4e-70 268.1 184 73.9
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 1.2e-69 266.9 168 74.4
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 2.7e-69 265.8 167 76.6
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 2.3e-68 262.7 166 74.7
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 2.3e-68 262.7 193 65.3
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 3.9e-68 261.9 168 74.4
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 2.5e-67 259.2 168 72.6
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 4.3e-67 258.5 168 74.4
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 9.5e-67 257.3 167 73.1
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 2.1e-66 256.1 167 72.5
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 2.8e-66 255.8 168 73.2
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 4.7e-66 255.0 169 73.4
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 8.1e-66 254.2 167 71.3
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 4.0e-65 251.9 164 71.3
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 5.2e-65 251.5 168 69.6
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 8.9e-65 250.8 165 73.9
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.2e-64 250.4 170 71.8
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.6e-64 249.2 168 70.2
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.4e-64 248.8 168 70.2
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 3.4e-64 248.8 165 73.9
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 1.7e-63 246.5 169 70.4
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 2.2e-63 246.1 172 69.8
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.9e-63 245.7 169 68.6
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 4.9e-63 245.0 168 68.5
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 6.4e-63 244.6 167 70.1
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 6.4e-63 244.6 165 72.1
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 6.4e-63 244.6 164 71.3
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 8.3e-63 244.2 167 71.3
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 1.1e-62 243.8 163 72.4
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.1e-62 243.8 168 70.8
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 1.4e-62 243.4 169 68.6
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 2.4e-62 242.7 192 63.0
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 3.2e-62 242.3 192 62.5
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 3.2e-62 242.3 168 68.5
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 3.2e-62 242.3 168 69.0
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 5.4e-62 241.5 167 71.9
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 7.1e-62 241.1 167 71.9
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 9.2e-62 240.7 169 68.0
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 9.2e-62 240.7 164 70.1
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 9.2e-62 240.7 168 67.3
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.2e-61 240.4 167 68.3
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 2.1e-61 239.6 168 66.7
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 2.7e-61 239.2 168 65.5
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 3.5e-61 238.8 167 72.5
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 3.5e-61 238.8 169 68.0
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 4.6e-61 238.4 166 68.7
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 7.8e-61 237.7 167 70.7
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 1.0e-60 237.3 167 71.9
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 1.7e-60 236.5 147 75.5
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 3.9e-60 235.3 169 67.5
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 5.1e-60 235.0 152 73.0
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 8.6e-60 234.2 168 67.9
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 1.5e-59 233.4 168 69.6
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.5e-59 233.4 166 69.9
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 1.5e-59 233.4 163 66.9
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 1.9e-59 233.0 167 69.5
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 1.9e-59 233.0 170 68.8
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 5.6e-59 231.5 170 69.4
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 9.5e-59 230.7 170 68.2
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 3.6e-58 228.8 169 65.7
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 3.6e-58 228.8 138 76.1
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 4.7e-58 228.4 152 69.7
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 6.2e-58 228.0 167 64.7
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 8.1e-58 227.6 167 68.3
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 8.1e-58 227.6 167 68.3
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 8.1e-58 227.6 167 68.3
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 8.1e-58 227.6 167 68.3
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 8.1e-58 227.6 167 68.3
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 1.4e-57 226.9 130 80.0
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 2.4e-57 226.1 118 90.7
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 4.0e-57 225.3 183 64.5
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 3.4e-56 222.2 145 79.3
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 4.4e-56 221.9 170 68.2
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 1.7e-55 219.9 167 61.7
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.7e-55 219.9 152 67.8
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 3.8e-55 218.8 151 70.9
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 8.4e-55 217.6 146 69.2
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.4e-54 216.9 192 61.5
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 3.2e-54 215.7 166 61.4
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 7.1e-54 214.5 131 74.8
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.1e-53 213.0 151 71.5
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 4.6e-53 211.8 193 59.1
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 2.5e-51 206.1 140 68.6
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.6e-50 203.4 149 66.4
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.1e-50 203.0 169 59.2
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 1.2e-48 197.2 145 66.2
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 2.9e-47 192.6 128 64.8
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.3e-42 177.2 145 58.6
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.1e-41 172.6 186 53.8
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.7e-39 166.8 152 57.2
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 3.5e-37 159.1 148 55.4
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 2.4e-33 146.4 75 81.3
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.4e-30 137.1 139 49.6
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.3e-26 124.0 146 43.8
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 2.2e-23 113.2 91 65.9
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 4.9e-23 112.1 59 79.7
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.2e-21 107.5 76 64.5
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 6.7e-20 101.7 87 60.9
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.4e-17 94.0 78 65.4
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.8e-17 93.6 57 71.9
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 2.2e-15 86.7 56 69.6
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 4.2e-14 82.4 46 73.9
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 4.6e-13 79.0 56 71.4
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 7.2e-06 55.1 95 31.6


User provided reference genes

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