Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 2.7e-58 228.4 113 100.0
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 8.8e-49 196.8 114 86.8
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 3.7e-47 191.4 110 81.8
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.2e-44 182.2 110 76.4
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.5e-43 179.5 111 78.4
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.2e-43 177.9 110 74.5
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 5.5e-43 177.6 108 78.7
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.1e-42 175.6 110 73.6
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 2.7e-42 175.3 109 72.5
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 3.6e-42 174.9 109 76.1
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 8.0e-42 173.7 109 70.6
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.0e-41 173.3 108 75.9
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.4e-41 172.9 110 72.7
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 2.3e-41 172.2 109 74.3
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 5.2e-41 171.0 108 74.1
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 6.8e-41 170.6 109 74.3
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 6.8e-41 170.6 109 74.3
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 8.8e-41 170.2 111 74.8
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 8.8e-41 170.2 111 74.8
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 3.4e-40 168.3 111 73.9
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 5.7e-40 167.5 110 68.2
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 7.5e-40 167.2 109 70.6
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 2.2e-39 165.6 109 67.0
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 2.8e-39 165.2 109 71.6
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 3.7e-39 164.9 109 71.6
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 3.7e-39 164.9 107 70.1
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 8.3e-39 163.7 111 71.2
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 8.3e-39 163.7 108 74.1
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 1.1e-38 163.3 107 72.0
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 1.8e-38 162.5 111 70.3
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 1.8e-38 162.5 109 67.0
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 5.4e-38 161.0 108 70.4
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 7.0e-38 160.6 113 71.7
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 7.0e-38 160.6 107 70.1
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.2e-37 159.8 108 67.6
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 7.7e-37 157.1 108 64.8
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 7.7e-37 157.1 109 64.2
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 1.3e-36 156.4 109 63.3
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 1.7e-36 156.0 99 73.7
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 3.8e-36 154.8 109 65.1
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 5.0e-36 154.5 109 65.1
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 1.9e-35 152.5 109 67.9
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 3.2e-35 151.8 109 63.3
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 4.2e-35 151.4 105 66.7
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 5.5e-35 151.0 107 68.2
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 7.2e-35 150.6 109 65.1
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 1.2e-34 149.8 108 63.9
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.1e-34 149.1 107 68.2
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 3.6e-34 148.3 108 64.8
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 6.1e-34 147.5 111 64.0
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 8.0e-34 147.1 109 67.0
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.0e-33 146.7 109 57.8
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.4e-33 146.4 108 65.7
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 1.4e-33 146.4 108 65.7
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 1.4e-33 146.4 109 64.2
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 1.8e-33 146.0 110 65.5
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.0e-33 145.2 112 65.2
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 4.0e-33 144.8 109 62.4
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 5.2e-33 144.4 109 64.2
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 1.2e-32 143.3 106 66.0
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 2.6e-32 142.1 107 65.4
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 4.4e-32 141.4 112 60.7
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.2e-31 139.0 112 61.6
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 8.3e-31 137.1 112 55.4
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 8.3e-31 137.1 106 61.3
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 1.8e-30 136.0 109 65.1
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 2.4e-30 135.6 110 60.0
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 3.1e-30 135.2 87 74.7
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 3.1e-30 135.2 109 61.5
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.1e-30 134.8 99 67.7
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 5.4e-30 134.4 112 63.4
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 5.4e-30 134.4 109 66.1
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 2.0e-29 132.5 110 60.9
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 3.5e-29 131.7 109 65.1
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 7.8e-29 130.6 109 58.7
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 1.3e-28 129.8 110 56.4
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 5.0e-28 127.9 110 56.4
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 5.0e-28 127.9 110 56.4
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 5.0e-28 127.9 111 57.7
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 6.6e-28 127.5 108 61.1
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 6.6e-28 127.5 70 88.6
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 1.1e-27 126.7 110 56.4
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.5e-27 126.3 102 62.7
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.9e-27 125.9 124 54.8
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 3.3e-27 125.2 110 55.5
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 3.3e-27 125.2 110 55.5
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 4.3e-27 124.8 110 55.5
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 4.3e-27 124.8 110 55.5
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 4.3e-27 124.8 109 61.5
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 4.7e-26 121.3 105 59.0
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 7.5e-24 114.0 110 51.8
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 9.8e-24 113.6 110 53.6
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 6.4e-23 110.9 110 58.2
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 5.4e-22 107.8 106 51.9
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 9.2e-22 107.1 109 52.3
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 7.8e-21 104.0 64 78.1
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.0e-20 103.6 96 59.4
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 3.0e-20 102.1 73 68.5
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 8.6e-20 100.5 58 86.2
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 2.5e-19 99.0 107 48.6
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 1.7e-15 86.3 107 41.1
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 2.2e-15 85.9 111 43.2
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 6.4e-15 84.3 110 42.7
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 1.1e-09 67.0 37 91.9
VMungo1080G1538 Vigna mungo HOM05D000002 ORTHO05D000001 1.7e-07 59.7 54 46.3
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 1.9e-06 56.2 38 73.7
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 4.1e-06 55.1 64 39.1


User provided reference genes

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