Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G245600 Prunus persica HOM05D008889 ORTHO05D009956 6.8e-58 227.3 126 100.0
MD17G1069000 Malus domestica HOM05D008889 ORTHO05D009956 4.3e-36 154.8 125 71.2
RcHm_v2.0_Chr2g0164181 Rosa chinensis HOM05D008889 ORTHO05D009956 2.0e-25 119.4 129 58.9
FAN05G4365 Fragaria x ananassa HOM05D008889 ORTHO05D009956 4.9e-24 114.8 129 58.1
FvH4_6g45950 Fragaria vesca HOM05D008889 ORTHO05D009956 6.4e-24 114.4 129 57.4
FAN14G5446 Fragaria x ananassa HOM05D008889 ORTHO05D009956 6.4e-24 114.4 129 57.4
FAN02G0304 Fragaria x ananassa HOM05D008889 ORTHO05D009956 1.1e-23 113.6 129 57.4
FAN09G2052 Fragaria x ananassa HOM05D008889 ORTHO05D009956 5.4e-23 111.3 129 56.6
Lalb_Chr10g0092501 Lupinus albus HOM05D008889 ORTHO05D009956 6.6e-13 77.8 129 45.0
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 1.9e-12 76.3 127 45.7
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 3.3e-12 75.5 128 46.1
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 4.3e-12 75.1 130 46.2
Glyma.08G254600 Glycine max HOM05D008889 ORTHO05D009956 1.3e-11 73.6 129 45.7
Ca_23534_v3 Cicer arietinum L. HOM05D008889 ORTHO05D009956 2.1e-11 72.8 133 39.8
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 2.1e-11 72.8 116 45.7
Duzib133G1477 Durio zibethinus HOM05D008889 ORTHO05D009956 8.1e-11 70.9 116 44.8
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 3.1e-10 68.9 131 42.0
Ciclev10013380m.g Citrus clementina HOM05D008889 ORTHO05D009956 9.0e-10 67.4 114 44.7
Medtr7g017790 Medicago truncatula HOM05D008889 ORTHO05D009956 1.2e-09 67.0 130 42.3
Sabra04G0073700 Salix brachista HOM05D008889 ORTHO05D009956 1.2e-09 67.0 117 43.6
Gorai.004G064000 Gossypium raimondii HOM05D009227 ORTHO05D009956 2.6e-09 65.9 76 52.6
Potri.017G107000 Populus trichocarpa HOM05D008889 ORTHO05D009956 5.8e-09 64.7 128 39.8
Gohir.D08G061900 Gossypium hirsutum HOM05D009227 ORTHO05D009956 9.9e-09 63.9 125 41.6
BcaC06g30842 Brassica carinata HOM05D009227 ORTHO05D009956 2.2e-08 62.8 133 42.1
Thecc.04G112500 Theobroma cacao HOM05D008889 ORTHO05D009956 2.2e-08 62.8 78 51.3
QL02p063786 Quercus lobata HOM05D009227 ORTHO05D009956 2.9e-08 62.4 77 46.8
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 3.8e-08 62.0 126 40.5
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 4.9e-08 61.6 116 40.5
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 6.4e-08 61.2 133 39.8
C02p56090 Brassica napus HOM05D009227 ORTHO05D009956 1.4e-07 60.1 69 55.1
BolC2t11666H Brassica oleracea HOM05D009227 ORTHO05D009956 1.4e-07 60.1 69 55.1
Thhalv10005597m.g Eutrema salsugineum HOM05D009227 ORTHO05D009956 1.4e-07 60.1 70 54.3
Sp2g18210 Schrenkiella parvula HOM05D009227 ORTHO05D009956 2.4e-07 59.3 127 40.9
Aa31LG9G16880 Aethionema arabicum HOM05D009227 ORTHO05D009956 3.2e-07 58.9 68 52.9
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 4.2e-07 58.5 128 43.8
AL7G51640 Arabidopsis lyrata HOM05D009227 ORTHO05D009956 5.5e-07 58.2 98 40.8
BcaB07g30061 Brassica carinata HOM05D009227 ORTHO05D009956 7.1e-07 57.8 67 53.7
A06p39660 Brassica napus HOM05D009227 ORTHO05D009956 7.1e-07 57.8 117 41.9
BraA06t26881Z Brassica rapa HOM05D009227 ORTHO05D009956 7.1e-07 57.8 117 41.9
A02p37090 Brassica napus HOM05D009227 ORTHO05D009956 9.3e-07 57.4 69 50.7
BraA02t08695Z Brassica rapa HOM05D009227 ORTHO05D009956 9.3e-07 57.4 69 50.7
AT5G38790 Arabidopsis thaliana HOM05D009227 ORTHO05D009956 1.2e-06 57.0 98 43.9
arahy.Tifrunner.gnm1.ann1.II05IL Arachis hypogaea HOM05D008889 ORTHO05D009956 1.2e-06 57.0 52 57.7
CANSAT64G2743 Cannabis sativa HOM05D008889 ORTHO05D009956 1.6e-06 56.6 124 44.4
Gohir.A08G052300 Gossypium hirsutum HOM05D008889 ORTHO05D009956 2.1e-06 56.2 125 40.8
Manes.14G093100 Manihot esculenta HOM05D018804 ORTHO05D014734 2.1e-06 56.2 81 46.9
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 2.7e-06 55.8 76 46.1
TWI34G1181 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 3.5e-06 55.5 114 39.5
Carub.0007s3707 Capsella rubella HOM05D009227 ORTHO05D009956 4.6e-06 55.1 124 41.9
Phvul.009G190900 Phaseolus vulgaris HOM05D008563 ORTHO05D009802 4.6e-06 55.1 66 50.0
Carub.0009s0002 Capsella rubella HOM05D009227 ORTHO05D009956 7.9e-06 54.3 132 38.6
CiPaw.04G050600 Carya illinoinensis HOM05D008889 ORTHO05D009956 7.9e-06 54.3 129 38.8


User provided reference genes

Program Settings