Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 0.0e+00 1219.1 615 100.0
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 4.4e-235 818.1 614 71.2
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 4.9e-234 814.7 613 70.8
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 2.8e-221 772.3 615 68.6
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.2e-203 713.8 645 62.6
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.7e-199 699.9 613 64.1
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.2e-193 678.7 613 63.0
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.4e-185 653.7 604 61.4
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 4.3e-182 642.1 619 59.8
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 3.4e-179 632.5 502 66.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 2.9e-178 629.4 613 58.7
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 5.1e-175 618.6 710 52.8
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 7.4e-166 588.2 623 55.1
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 2.9e-162 576.2 632 54.9
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 5.5e-161 572.0 787 47.0
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 3.7e-157 559.3 613 52.9
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.1e-156 557.8 610 54.6
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 5.3e-156 555.4 636 53.5
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.2e-155 554.3 606 53.5
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.2e-155 554.3 610 53.0
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 5.9e-155 552.0 611 53.4
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.4e-153 547.4 527 59.2
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 5.5e-153 545.4 619 53.0
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 7.9e-152 541.6 599 52.4
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 3.0e-151 539.7 606 52.0
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.9e-151 539.3 605 54.9
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.3e-149 534.3 634 50.9
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 3.1e-148 529.6 614 52.0
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.2e-147 527.7 613 51.7
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.6e-147 526.6 506 58.1
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 2.6e-147 526.6 473 60.5
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 3.4e-147 526.2 630 51.0
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 5.9e-147 525.4 532 54.5
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 1.0e-146 524.6 522 55.0
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 2.2e-146 523.5 627 51.8
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 7.2e-145 518.5 466 62.2
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 3.6e-144 516.2 612 51.1
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 3.0e-143 513.1 540 54.4
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 8.8e-143 511.5 615 50.1
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 3.7e-141 506.1 569 51.0
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 4.8e-141 505.8 633 49.9
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 1.4e-140 504.2 432 63.4
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 1.8e-140 503.8 684 46.2
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 4.1e-140 502.7 434 63.6
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.6e-139 500.7 608 52.0
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 5.9e-139 498.8 608 51.8
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 5.9e-139 498.8 532 53.0
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 5.9e-139 498.8 601 51.4
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.0e-138 498.0 608 51.5
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.2e-138 496.9 435 64.6
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 2.2e-138 496.9 504 57.3
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 8.5e-138 495.0 504 57.3
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 5.5e-137 492.3 445 60.7
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 6.7e-135 485.3 483 56.7
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.5e-134 484.2 610 48.4
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 2.6e-134 483.4 559 50.8
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 2.6e-134 483.4 634 46.7
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 3.3e-134 483.0 547 50.1
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 7.5e-134 481.9 448 60.0
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 1.7e-133 480.7 527 51.0
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 2.4e-132 476.9 520 54.6
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 3.1e-132 476.5 480 56.5
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 2.2e-130 470.3 441 56.0
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 1.6e-128 464.2 548 53.8
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 2.7e-128 463.4 533 54.0
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.0e-127 461.5 535 50.8
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.2e-126 458.0 533 51.2
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 2.0e-126 457.2 560 49.5
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 3.1e-124 449.9 528 50.2
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.0e-122 444.9 522 52.5
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 5.0e-122 442.6 439 58.8
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 9.5e-121 438.3 429 57.3
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 2.8e-120 436.8 559 48.7
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 8.0e-120 435.3 386 62.7
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 1.8e-119 434.1 573 49.0
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 3.0e-119 433.3 567 48.7
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.8e-116 424.1 437 54.0
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 2.9e-114 416.8 478 51.9
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 6.6e-114 415.6 450 52.0
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 1.9e-113 414.1 615 44.1
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 2.1e-112 410.6 678 40.7
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 8.0e-112 408.7 617 43.1
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 5.2e-111 406.0 417 55.6
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.2e-110 404.8 486 51.4
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.6e-110 403.7 387 58.4
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.7e-109 401.0 569 46.0
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.2e-109 400.6 504 48.6
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 4.1e-108 396.4 515 48.7
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.6e-107 392.9 495 48.9
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 7.8e-107 392.1 499 48.7
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.3e-106 391.3 497 48.7
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 3.9e-106 389.8 497 49.3
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 3.9e-106 389.8 406 54.9
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 3.9e-106 389.8 406 54.9
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.9e-106 389.8 588 44.2
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 8.6e-106 388.7 395 55.2
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.5e-105 387.1 459 51.9
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 4.3e-105 386.3 434 51.4
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 5.6e-105 386.0 395 54.9
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 7.3e-105 385.6 510 47.6
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 1.4e-103 381.3 430 52.3
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 6.8e-103 379.0 637 41.8
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 1.3e-101 374.8 390 54.4
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.9e-101 373.6 407 52.3
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 6.4e-101 372.5 428 49.3
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.9e-100 370.9 494 48.2
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 7.0e-100 369.0 591 42.6
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 8.1e-96 355.5 394 51.8
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 3.1e-95 353.6 426 49.8
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 6.8e-95 352.4 364 55.8
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.4e-94 350.1 374 52.7
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.4e-94 349.7 374 54.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 7.5e-94 349.0 442 48.0
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.7e-93 347.8 402 52.2
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 2.2e-93 347.4 403 51.6
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 6.4e-93 345.9 401 52.6
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 6.4e-93 345.9 401 52.6
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 1.9e-92 344.4 401 51.9
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 2.4e-92 344.0 451 48.3
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 3.0e-90 337.0 384 49.7
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 8.6e-90 335.5 521 42.2
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.9e-84 317.8 402 48.5
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.9e-84 317.8 487 40.5
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.4e-84 317.4 443 44.7
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 4.2e-84 316.6 275 61.5
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 9.2e-84 315.5 492 43.5
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.6e-83 314.7 382 45.5
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 6.0e-83 312.8 341 52.2
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 6.6e-82 309.3 399 48.4
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.7e-75 287.3 229 63.8
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 8.1e-72 275.8 244 62.7
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 5.8e-70 269.6 318 52.5
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 6.0e-67 259.6 346 43.1
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 4.0e-63 246.9 343 44.9
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 7.1e-60 236.1 229 58.1
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 1.6e-59 235.0 309 43.0
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.1e-51 208.0 272 45.2
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 4.6e-51 206.8 257 48.2
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 1.1e-44 185.7 226 53.5
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.9e-44 184.9 443 34.1
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 9.4e-44 182.6 249 44.6
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 2.0e-38 164.9 537 29.8
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 7.7e-38 162.9 166 52.4
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 5.0e-37 160.2 566 29.5
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 6.1e-27 126.7 201 36.3
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 3.3e-25 120.9 331 30.8
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.2e-24 118.2 207 36.2
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.6e-22 111.3 259 35.5
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 2.3e-18 98.2 80 57.5
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 6.3e-08 63.5 185 30.8
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 1.2e-06 59.3 211 27.5
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 7.7e-06 56.6 78 41.0


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